Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2754 Ceratophyllum demersum HOM05D006738 ORTHO05D008191 6.7e-64 247.3 134 100.0
PGSC0003DMG400005175 Solanum tuberosum HOM05D006738 ORTHO05D008191 1.5e-47 193.0 134 73.1
Nitab4.5_0006564g0050 Nicotiana tabacum HOM05D006738 ORTHO05D008191 2.6e-47 192.2 134 73.1
Solyc06g064810.3 Solanum lycopersicum HOM05D006738 ORTHO05D008191 3.4e-47 191.8 134 72.4
Sopen06g023320 Solanum pennellii HOM05D006738 ORTHO05D008191 3.4e-47 191.8 134 72.4
Sc20g0004710 Simmondsia chinensis HOM05D006738 ORTHO05D008191 5.4e-45 184.5 136 70.6
CsaV3_5G040220 Cucumis sativus L. HOM05D006738 ORTHO05D008191 2.0e-44 182.6 134 72.4
HPP92_002035 Vanilla planifolia HOM05D006738 ORTHO05D008191 1.1e-42 176.8 134 72.4
CSS0018644 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.9e-42 176.0 137 67.9
CSS0019392 Camellia sinensis var. sinensis HOM05D006738 ORTHO05D008191 1.9e-42 176.0 137 67.9
MELO3C022198.2 Cucumis melo HOM05D006738 ORTHO05D008191 3.3e-42 175.3 134 71.6
Migut.C01346 Erythranthe guttata HOM05D006738 ORTHO05D008191 5.6e-42 174.5 136 67.6
Lsat_1_v5_gn_5_78501 Lactuca sativa HOM05D006738 ORTHO05D008191 1.6e-41 172.9 133 66.2
RcHm_v2.0_Chr7g0216321 Rosa chinensis HOM05D006738 ORTHO05D008191 2.8e-41 172.2 137 66.4
arahy.Tifrunner.gnm1.ann1.WI646Q Arachis hypogaea HOM05D006738 ORTHO05D008191 3.6e-41 171.8 136 68.4
arahy.Tifrunner.gnm1.ann1.67ZQRX Arachis hypogaea HOM05D006738 ORTHO05D008191 8.0e-41 170.6 136 67.6
ECA234G1792 Erigeron canadensis HOM05D006738 ORTHO05D008191 8.0e-41 170.6 136 65.4
Nn5g27492 Nelumbo nucifera HOM05D006738 ORTHO05D008191 8.0e-41 170.6 136 72.1
Oeu048220.2 Olea europaea HOM05D006738 ORTHO05D008191 1.8e-40 169.5 133 72.2
COL.COLO4_24620 Corchorus olitorius HOM05D006738 ORTHO05D008191 2.3e-40 169.1 135 69.6
DCAR_002119 Daucus carota HOM05D006738 ORTHO05D008191 2.3e-40 169.1 134 70.9
QL09p002987 Quercus lobata HOM05D006738 ORTHO05D008191 2.3e-40 169.1 139 64.7
Lj3g0020973 Lotus japonicus HOM05D006738 ORTHO05D008191 4.0e-40 168.3 133 65.4
Cpa.g.sc21.54 Carica papaya HOM05D006738 ORTHO05D008191 6.8e-40 167.5 137 70.8
VMungo1215G3331 Vigna mungo HOM05D006738 ORTHO05D008191 8.9e-40 167.2 133 66.2
Aqoxy6G00074 Aquilegia oxysepala HOM05D006738 ORTHO05D008191 1.2e-39 166.8 138 61.6
Gohir.D05G253900 Gossypium hirsutum HOM05D006738 ORTHO05D008191 2.0e-39 166.0 135 70.4
Thecc.08G171800 Theobroma cacao HOM05D006738 ORTHO05D008191 2.0e-39 166.0 136 70.6
Potri.019G076400 Populus trichocarpa HOM05D006738 ORTHO05D008191 2.6e-39 165.6 136 69.1
arahy.Tifrunner.gnm1.ann1.H480WY Arachis hypogaea HOM05D006738 ORTHO05D008191 4.4e-39 164.9 132 66.7
Gohir.A05G252100 Gossypium hirsutum HOM05D006738 ORTHO05D008191 4.4e-39 164.9 135 69.6
MD15G1400100 Malus domestica HOM05D006738 ORTHO05D008191 4.4e-39 164.9 135 68.9
EL10Ac9g22957 Beta vulgaris HOM05D006738 ORTHO05D008191 5.7e-39 164.5 137 63.5
unitig_748.g7730 Utricularia gibba HOM05D000331 ORTHO05D003399 5.7e-39 164.5 137 65.7
ATR1089G071 Amborella trichopoda HOM05D006738 ORTHO05D008191 7.5e-39 164.1 135 68.1
BcaC08g43833 Brassica carinata HOM05D006738 ORTHO05D008191 7.5e-39 164.1 134 61.9
BolC6t36356H Brassica oleracea HOM05D006738 ORTHO05D008191 7.5e-39 164.1 134 61.9
PGR042G2463 Punica granatum HOM05D006738 ORTHO05D008191 7.5e-39 164.1 134 67.9
Sed0003815 Sechium edule HOM05D006738 ORTHO05D008191 7.5e-39 164.1 137 67.2
C06p12150 Brassica napus HOM05D006738 ORTHO05D008191 9.8e-39 163.7 134 61.9
MD08G1215600 Malus domestica HOM05D006738 ORTHO05D008191 9.8e-39 163.7 135 68.9
TWI14G1101 Tripterygium wilfordii HOM05D006738 ORTHO05D008191 1.3e-38 163.3 134 67.2
Prupe.1G547300 Prunus persica HOM05D006738 ORTHO05D008191 2.9e-38 162.2 135 68.1
Sabra19G0086800 Salix brachista HOM05D006738 ORTHO05D008191 3.7e-38 161.8 136 66.9
Duzib211G0443 Durio zibethinus HOM05D006738 ORTHO05D008191 4.9e-38 161.4 137 67.2
Haze_13918 Corylus avellana HOM05D006738 ORTHO05D008191 6.4e-38 161.0 141 62.4
FvH4_5g25840 Fragaria vesca HOM05D006738 ORTHO05D008191 6.4e-38 161.0 138 63.8
FAN18G1689 Fragaria x ananassa HOM05D006738 ORTHO05D008191 6.4e-38 161.0 138 63.8
FAN08G0599 Fragaria x ananassa HOM05D006738 ORTHO05D008191 8.3e-38 160.6 138 63.8
Ah.01g012440 Amaranthus hybridus HOM05D006738 ORTHO05D008191 1.1e-37 160.2 133 63.9
CANSAT11G1518 Cannabis sativa HOM05D006738 ORTHO05D008191 1.1e-37 160.2 135 70.4
AUR62032974 Chenopodium quinoa HOM05D006738 ORTHO05D008191 1.4e-37 159.8 139 66.9
FAN04G1736 Fragaria x ananassa HOM05D006738 ORTHO05D008191 1.4e-37 159.8 138 63.8
GSVIVG01025906001 Vitis vinifera HOM05D006738 ORTHO05D008191 1.4e-37 159.8 140 65.7
THA.LOC104815902 Tarenaya hassleriana HOM05D006738 ORTHO05D008191 2.4e-37 159.1 134 67.2
Atru.chr12.822 Acer truncatum HOM05D006738 ORTHO05D008191 3.2e-37 158.7 137 66.4
BraA09t38801Z Brassica rapa HOM05D006738 ORTHO05D008191 3.2e-37 158.7 136 60.3
A09p32610 Brassica napus HOM05D006738 ORTHO05D008191 4.1e-37 158.3 136 60.3
Eucgr.F02960 Eucalyptus grandis HOM05D006738 ORTHO05D008191 4.1e-37 158.3 135 67.4
AL1G48260 Arabidopsis lyrata HOM05D006738 ORTHO05D008191 7.0e-37 157.5 137 59.9
QL09p004200 Quercus lobata HOM05D006738 ORTHO05D008191 9.2e-37 157.1 139 66.2
Ciclev10022763m.g Citrus clementina HOM05D006738 ORTHO05D008191 1.2e-36 156.8 138 63.0
Glyma.01G010600 Glycine max HOM05D006738 ORTHO05D008191 1.2e-36 156.8 134 67.2
AT1G33810 Arabidopsis thaliana HOM05D006738 ORTHO05D008191 2.0e-36 156.0 136 60.3
AUR62017706 Chenopodium quinoa HOM05D006738 ORTHO05D008191 2.0e-36 156.0 137 66.4
Psat0s2394g0120 Pisum sativum HOM05D006738 ORTHO05D008191 2.0e-36 156.0 133 64.7
Dinv41794 Davidia involucrata HOM05D006738 ORTHO05D008191 4.6e-36 154.8 140 66.4
CiPaw.04G011300 Carya illinoinensis HOM05D006738 ORTHO05D008191 5.9e-36 154.5 137 65.0
QL09p004074 Quercus lobata HOM05D006738 ORTHO05D008191 5.9e-36 154.5 139 65.5
Phvul.002G133500 Phaseolus vulgaris HOM05D006738 ORTHO05D008191 7.8e-36 154.1 133 66.9
Cc10_g09240 Coffea canephora HOM05D006738 ORTHO05D008191 1.0e-35 153.7 138 65.9
Manes.02G195900 Manihot esculenta HOM05D006738 ORTHO05D008191 1.3e-35 153.3 139 64.0
PSO170G3684 Papaver somniferum HOM05D006738 ORTHO05D008191 2.3e-35 152.5 140 65.0
Lj2A790G37 Lonicera japonica HOM05D006738 ORTHO05D008191 2.9e-35 152.1 115 72.2
PSO782G5196 Papaver somniferum HOM05D006738 ORTHO05D008191 5.0e-35 151.4 139 65.5
Peaxi162Scf00269g01621 Petunia axillaris HOM05D006738 ORTHO05D008191 1.1e-34 150.2 134 60.4
CiPaw.03G017200 Carya illinoinensis HOM05D006738 ORTHO05D008191 1.5e-34 149.8 137 62.8
Lalb_Chr01g0000011 Lupinus albus HOM05D006738 ORTHO05D008191 1.5e-34 149.8 133 64.7
SGA_v2.0_scaffold24G10619 Striga asiatica HOM05D006738 ORTHO05D008191 1.5e-34 149.8 135 65.9
TPR.G34128 Trifolium pratense HOM05D006738 ORTHO05D008191 1.9e-34 149.4 134 64.2
Aa31LG6G8130 Aethionema arabicum HOM05D000065 ORTHO05D000162 2.1e-33 146.0 131 61.1
Medtr4g031650 Medicago truncatula HOM05D006738 ORTHO05D008191 1.4e-32 143.3 134 61.9
CARHR033210 Cardamine hirsuta HOM05D006738 ORTHO05D008191 1.8e-32 142.9 135 60.7
Sp1g29140 Schrenkiella parvula HOM05D006738 ORTHO05D008191 1.8e-32 142.9 134 60.4
BcaB07g33015 Brassica carinata HOM05D006738 ORTHO05D008191 5.2e-32 141.4 134 59.7
Thhalv10009075m.g Eutrema salsugineum HOM05D006738 ORTHO05D008191 1.2e-31 140.2 134 59.7
MBI03_g14516_MAGBIO Magnolia biondii HOM05D006738 ORTHO05D008191 1.3e-30 136.7 98 78.6
Rhsim07G0068100 Rhododendron simsii HOM05D006738 ORTHO05D008191 4.9e-30 134.8 158 50.0
Os08g0112600 Oryza sativa ssp. japonica HOM05D006738 ORTHO05D008191 6.4e-30 134.4 138 50.7
Carub.0001s3198 Capsella rubella HOM05D006738 ORTHO05D008191 1.4e-29 133.3 137 57.7
QL09p000479 Quercus lobata HOM05D006738 ORTHO05D008191 6.0e-28 127.9 115 61.7
Gorai.009G265500 Gossypium raimondii HOM05D006738 ORTHO05D008191 1.5e-26 123.2 110 67.3
Cfa008114 Carpinus fangiana HOM05D006738 ORTHO05D008191 1.6e-25 119.8 134 52.2
AagrBONN_evm.TU.Sc2ySwM_228.5134 Anthoceros agrestis HOM05D006738 ORTHO05D008191 4.7e-25 118.2 127 45.7
QL09p000342 Quercus lobata HOM05D006738 ORTHO05D008191 8.9e-24 114.0 138 52.9
Actinidia29399 Actinidia chinensis HOM05D006738 ORTHO05D008191 1.5e-23 113.2 110 62.7
Pp3c3_5650 Physcomitrium patens HOM05D006738 ORTHO05D008191 5.8e-23 111.3 128 46.1
QL09p000618 Quercus lobata HOM05D006738 ORTHO05D008191 1.7e-22 109.8 100 61.0
Cc10_g16410 Coffea canephora HOM05D006738 ORTHO05D008191 2.9e-22 109.0 77 68.8
SEGI_33861 Sequoiadendron giganteum HOM05D006738 ORTHO05D008191 1.4e-21 106.7 115 56.5
SMO118G0306 Selaginella moellendorffii HOM05D006738 ORTHO05D008191 1.2e-20 103.6 126 40.5
Mapoly0047s0047 Marchantia polymorpha HOM05D006738 ORTHO05D008191 1.6e-20 103.2 117 44.4
CiPaw.09G026000 Carya illinoinensis HOM05D006738 ORTHO05D008191 7.8e-20 100.9 138 43.5
vmacro13762 Vaccinium macrocarpon HOM05D006738 ORTHO05D008191 2.3e-19 99.4 127 47.2
ClCG08G000640 Citrullus lanatus HOM05D006738 ORTHO05D008191 3.3e-18 95.5 339 27.1
Zm00001eb260580 Zea mays HOM05D006738 ORTHO05D008191 3.3e-18 95.5 115 51.3
QL09p003020 Quercus lobata HOM05D006738 ORTHO05D008191 9.5e-18 94.0 70 67.1
Zm00001eb236960 Zea mays HOM05D002538 ORTHO05D008191 1.2e-17 93.6 111 45.0
HanXRQChr10g0309751 Helianthus annuus HOM05D006738 ORTHO05D008191 7.1e-13 77.8 72 56.9
FAN13G2380 Fragaria x ananassa HOM05D006738 ORTHO05D008191 4.6e-12 75.1 136 39.7
CiPaw.16G110800 Carya illinoinensis HOM05D006738 ORTHO05D008191 2.3e-11 72.8 66 56.1
Oeu017736.2 Olea europaea HOM05D006738 ORTHO05D008191 3.0e-11 72.4 82 51.2
Hma1.2p1_0935F.1_g238700 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 5.1e-11 71.6 42 81.0
Medtr4g031845 Medicago truncatula HOM05D006738 ORTHO05D008191 9.6e-10 67.4 67 55.2
Hma1.2p1_0935F.1_g238670 Hydrangea macrophylla HOM05D006738 ORTHO05D008191 1.1e-08 63.9 70 55.7
Glyma.09G210500 Glycine max HOM05D006738 ORTHO05D008191 8.9e-08 60.8 71 50.7
SHI08988 Sapria himalayana HOM05D006738 ORTHO05D008191 1.3e-06 57.0 73 46.6
PRCOL_00001928 Prasinoderma coloniale HOM05D006738 ORTHO05D008191 2.9e-06 55.8 81 33.3


User provided reference genes

Program Settings