Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2693 Ceratophyllum demersum HOM05D002826 ORTHO05D003105 1.5e-86 322.8 163 100.0
CDE05G2980 Ceratophyllum demersum HOM05D002826 ORTHO05D003105 8.2e-64 247.3 130 93.8
Nn1g01623 Nelumbo nucifera HOM05D002826 ORTHO05D003105 2.7e-35 152.5 141 59.6
Nn6g31897 Nelumbo nucifera HOM05D002826 ORTHO05D003105 8.8e-34 147.5 141 59.6
TAR628G1706 Trochodendron aralioides HOM05D002826 ORTHO05D003105 8.8e-34 147.5 141 56.7
Hma1.2p1_3012F.1_g331620 Hydrangea macrophylla HOM05D002826 ORTHO05D003105 3.4e-33 145.6 140 59.3
Dinv31898 Davidia involucrata HOM05D002826 ORTHO05D003105 1.7e-32 143.3 139 58.3
Solyc04g082020.3 Solanum lycopersicum HOM05D002826 ORTHO05D003105 1.7e-32 143.3 138 60.9
Sopen04g035670 Solanum pennellii HOM05D002826 ORTHO05D003105 2.8e-32 142.5 138 60.9
GSVIVG01008732001 Vitis vinifera HOM05D002826 ORTHO05D003105 6.3e-32 141.4 139 57.6
CSS0023064 Camellia sinensis var. sinensis HOM05D002826 ORTHO05D003105 1.1e-31 140.6 148 57.4
Cpa.g.sc26.255 Carica papaya HOM05D002826 ORTHO05D003105 1.4e-31 140.2 140 57.9
CiPaw.08G069700 Carya illinoinensis HOM05D002826 ORTHO05D003105 1.4e-31 140.2 139 58.3
Potri.005G246200 Populus trichocarpa HOM05D002826 ORTHO05D003105 1.8e-31 139.8 143 58.0
Manes.05G141900 Manihot esculenta HOM05D002826 ORTHO05D003105 2.4e-31 139.4 141 59.6
Peaxi162Scf00174g01015 Petunia axillaris HOM05D002826 ORTHO05D003105 2.4e-31 139.4 137 62.0
TAR381G1567 Trochodendron aralioides HOM05D002826 ORTHO05D003105 3.1e-31 139.0 141 55.3
Ciclev10002475m.g Citrus clementina HOM05D002826 ORTHO05D003105 5.4e-31 138.3 140 56.4
Duzib116G0507 Durio zibethinus HOM05D002826 ORTHO05D003105 5.4e-31 138.3 140 56.4
QL11p052502 Quercus lobata HOM05D002826 ORTHO05D003105 9.1e-31 137.5 134 57.5
Sabra05G0190300 Salix brachista HOM05D002826 ORTHO05D003105 9.1e-31 137.5 141 57.4
PGSC0003DMG400009958 Solanum tuberosum HOM05D002826 ORTHO05D003105 9.1e-31 137.5 138 58.7
TWI56G0331 Tripterygium wilfordii HOM05D002826 ORTHO05D003105 9.1e-31 137.5 139 56.1
Dinv39561 Davidia involucrata HOM05D002826 ORTHO05D003105 1.6e-30 136.7 139 57.6
THA.LOC104813220 Tarenaya hassleriana HOM05D002826 ORTHO05D003105 2.7e-30 136.0 126 57.1
Duzib093G1699 Durio zibethinus HOM05D002826 ORTHO05D003105 3.5e-30 135.6 141 56.7
Eucgr.F03705 Eucalyptus grandis HOM05D002826 ORTHO05D003105 3.5e-30 135.6 122 59.8
Potri.002G015900 Populus trichocarpa HOM05D002826 ORTHO05D003105 3.5e-30 135.6 138 57.2
QL02p013021 Quercus lobata HOM05D002826 ORTHO05D003105 3.5e-30 135.6 145 57.2
Thecc.08G052500 Theobroma cacao HOM05D002826 ORTHO05D003105 3.5e-30 135.6 132 57.6
Aqoxy6G01935 Aquilegia oxysepala HOM05D002826 ORTHO05D003105 4.5e-30 135.2 143 54.5
Hma1.2p1_2322F.1_g319860 Hydrangea macrophylla HOM05D002826 ORTHO05D003105 5.9e-30 134.8 162 51.2
Sabra02G0012700 Salix brachista HOM05D002826 ORTHO05D003105 7.7e-30 134.4 137 57.7
COL.COLO4_26077 Corchorus olitorius HOM05D002826 ORTHO05D003105 1.7e-29 133.3 142 55.6
HanXRQChr11g0322251 Helianthus annuus HOM05D002826 ORTHO05D003105 1.7e-29 133.3 140 56.4
Nitab4.5_0003030g0020 Nicotiana tabacum HOM05D002826 ORTHO05D003105 1.7e-29 133.3 138 60.9
CSS0009204 Camellia sinensis var. sinensis HOM05D002826 ORTHO05D003105 2.3e-29 132.9 145 54.5
MD10G1129200 Malus domestica HOM05D002826 ORTHO05D003105 2.3e-29 132.9 132 56.1
CsaV3_7G001250 Cucumis sativus L. HOM05D002826 ORTHO05D003105 2.9e-29 132.5 130 55.4
Lj4A802T110 Lonicera japonica HOM05D002826 ORTHO05D003105 5.0e-29 131.7 144 54.9
MBI08_g05716_MAGBIO Magnolia biondii HOM05D002826 ORTHO05D003105 5.0e-29 131.7 103 68.9
SalBow6G2958 Salvia bowleyana HOM05D002826 ORTHO05D003105 6.6e-29 131.3 125 57.6
Aa31LG9G12360 Aethionema arabicum HOM05D002826 ORTHO05D003105 1.1e-28 130.6 128 60.2
ClCG02G003880 Citrullus lanatus HOM05D002826 ORTHO05D003105 1.1e-28 130.6 116 62.9
Haze_22718 Corylus avellana HOM05D002826 ORTHO05D003105 1.1e-28 130.6 139 53.2
MELO3C013330.2 Cucumis melo HOM05D002826 ORTHO05D003105 1.1e-28 130.6 130 54.6
Gohir.A01G108700 Gossypium hirsutum HOM05D002826 ORTHO05D003105 1.1e-28 130.6 103 67.0
Sc18g0006230 Simmondsia chinensis HOM05D002826 ORTHO05D003105 1.9e-28 129.8 106 63.2
HPP92_014544 Vanilla planifolia HOM05D002236 ORTHO05D002341 2.5e-28 129.4 141 55.3
ECA232G0330 Erigeron canadensis HOM05D002826 ORTHO05D003105 3.3e-28 129.0 142 52.8
FvH4_2g15740 Fragaria vesca HOM05D002826 ORTHO05D003105 3.3e-28 129.0 139 56.8
Gorai.002G120700 Gossypium raimondii HOM05D002826 ORTHO05D003105 3.3e-28 129.0 136 58.8
HanXRQChr06g0184841 Helianthus annuus HOM05D002826 ORTHO05D003105 3.3e-28 129.0 143 54.5
Rhsim06G0011300 Rhododendron simsii HOM05D002826 ORTHO05D003105 3.3e-28 129.0 136 55.9
Prupe.8G169800 Prunus persica HOM05D002826 ORTHO05D003105 4.2e-28 128.6 132 56.1
RcHm_v2.0_Chr6g0279051 Rosa chinensis HOM05D002826 ORTHO05D003105 4.2e-28 128.6 133 57.9
FAN15G0661 Fragaria x ananassa HOM05D002826 ORTHO05D003105 5.5e-28 128.3 142 53.5
Gohir.D01G095300 Gossypium hirsutum HOM05D002826 ORTHO05D003105 7.2e-28 127.9 136 58.8
Ah.01g023310 Amaranthus hybridus HOM05D002826 ORTHO05D003105 9.5e-28 127.5 131 55.7
Lsat_1_v5_gn_2_6900 Lactuca sativa HOM05D002826 ORTHO05D003105 9.5e-28 127.5 144 53.5
Migut.N03189 Erythranthe guttata HOM05D002826 ORTHO05D003105 1.2e-27 127.1 144 54.9
FAN27G0593 Fragaria x ananassa HOM05D002826 ORTHO05D003105 1.2e-27 127.1 140 55.0
BcaC03g16466 Brassica carinata HOM05D002826 ORTHO05D003105 1.6e-27 126.7 126 57.9
C02p42780 Brassica napus HOM05D002826 ORTHO05D003105 1.6e-27 126.7 126 57.9
BolC2t10314H Brassica oleracea HOM05D002826 ORTHO05D003105 1.6e-27 126.7 126 57.9
FAN24G2039 Fragaria x ananassa HOM05D002826 ORTHO05D003105 1.6e-27 126.7 139 56.1
Actinidia17021 Actinidia chinensis HOM05D002826 ORTHO05D003105 2.1e-27 126.3 143 53.8
Cc10_g01070 Coffea canephora HOM05D002826 ORTHO05D003105 2.1e-27 126.3 111 67.6
Sed0003034 Sechium edule HOM05D002826 ORTHO05D003105 2.1e-27 126.3 132 56.1
Medtr1g112990 Medicago truncatula HOM05D002826 ORTHO05D003105 3.6e-27 125.6 106 63.2
DCAR_013893 Daucus carota HOM05D002826 ORTHO05D003105 4.7e-27 125.2 107 63.6
Lj5g0014599 Lotus japonicus HOM05D002826 ORTHO05D003105 4.7e-27 125.2 80 77.5
Haze_02092 Corylus avellana HOM05D002826 ORTHO05D003105 8.0e-27 124.4 147 53.1
SGA_v2.0_scaffold145G36105 Striga asiatica HOM05D002826 ORTHO05D003105 8.0e-27 124.4 140 55.7
vmacro21847 Vaccinium macrocarpon HOM05D002826 ORTHO05D003105 8.0e-27 124.4 136 54.4
Glyma.10G283900 Glycine max HOM05D002826 ORTHO05D003105 1.0e-26 124.0 78 79.5
Glyma.20G105800 Glycine max HOM05D002826 ORTHO05D003105 1.0e-26 124.0 78 79.5
SGA_v2.0_scaffold275G46539 Striga asiatica HOM05D002826 ORTHO05D003105 1.0e-26 124.0 140 55.0
Sp7g08460 Schrenkiella parvula HOM05D002826 ORTHO05D003105 1.8e-26 123.2 126 57.1
Zm00001eb228290 Zea mays HOM05D002826 ORTHO05D003105 2.3e-26 122.9 138 55.1
Os06g0724400 Oryza sativa ssp. japonica HOM05D002826 ORTHO05D003105 3.0e-26 122.5 94 67.0
Sed0001204 Sechium edule HOM05D002826 ORTHO05D003105 3.0e-26 122.5 106 63.2
Zm00001eb272170 Zea mays HOM05D002826 ORTHO05D003105 3.0e-26 122.5 90 70.0
Thhalv10027929m.g Eutrema salsugineum HOM05D002826 ORTHO05D003105 4.0e-26 122.1 126 56.3
PSO675G0007 Papaver somniferum HOM05D002826 ORTHO05D003105 4.0e-26 122.1 143 52.4
CARHR185890 Cardamine hirsuta HOM05D002826 ORTHO05D003105 6.8e-26 121.3 130 57.7
Cfa005295 Carpinus fangiana HOM05D002826 ORTHO05D003105 6.8e-26 121.3 147 53.7
CANSAT25G1892 Cannabis sativa HOM05D002826 ORTHO05D003105 8.9e-26 120.9 132 54.5
CANSAT25G2885 Cannabis sativa HOM05D002826 ORTHO05D003105 8.9e-26 120.9 132 54.5
AUR62010005 Chenopodium quinoa HOM05D002826 ORTHO05D003105 8.9e-26 120.9 106 58.5
PSO541G5721 Papaver somniferum HOM05D002826 ORTHO05D003105 8.9e-26 120.9 143 52.4
PGR142G1133 Punica granatum HOM05D002826 ORTHO05D003105 1.5e-25 120.2 121 55.4
MD05G1126400 Malus domestica HOM05D002826 ORTHO05D003105 2.0e-25 119.8 129 55.8
AL6G39820 Arabidopsis lyrata HOM05D002826 ORTHO05D003105 2.6e-25 119.4 129 57.4
CiPaw.05G085900 Carya illinoinensis HOM05D002826 ORTHO05D003105 2.6e-25 119.4 157 47.1
Ca_03293_v3 Cicer arietinum L. HOM05D002826 ORTHO05D003105 2.6e-25 119.4 152 49.3
unitig_744.g24605 Utricularia gibba HOM05D002826 ORTHO05D003105 3.4e-25 119.0 134 55.2
Phvul.007G017400 Phaseolus vulgaris HOM05D002826 ORTHO05D003105 5.7e-25 118.2 78 78.2
Lalb_Chr06g0163761 Lupinus albus HOM05D002826 ORTHO05D003105 9.8e-25 117.5 111 57.7
Carub.0006s2525 Capsella rubella HOM05D002826 ORTHO05D003105 1.3e-24 117.1 96 65.6
VMungo0720G1494 Vigna mungo HOM05D002826 ORTHO05D003105 1.3e-24 117.1 107 61.7
SalBow7G0593 Salvia bowleyana HOM05D002826 ORTHO05D003105 1.7e-24 116.7 147 52.4
Oeu041361.1 Olea europaea HOM05D002826 ORTHO05D003105 2.2e-24 116.3 141 52.5
EL10Ac9g21332 Beta vulgaris HOM05D002826 ORTHO05D003105 2.8e-24 115.9 119 52.1
Eucgr.I01459 Eucalyptus grandis HOM05D002826 ORTHO05D003105 4.9e-24 115.2 104 57.7
FAN20G0297 Fragaria x ananassa HOM05D002236 ORTHO05D002341 8.3e-24 114.4 75 72.0
AT5G27280 Arabidopsis thaliana HOM05D002826 ORTHO05D003105 1.4e-23 113.6 103 64.1
TPR.G2417 Trifolium pratense HOM05D002826 ORTHO05D003105 1.8e-23 113.2 81 69.1
ATR0661G310 Amborella trichopoda HOM05D002826 ORTHO05D003105 2.4e-23 112.8 127 52.0
AUR62012994 Chenopodium quinoa HOM05D002826 ORTHO05D003105 4.1e-23 112.1 138 48.6
CAN.G311.81 Capsicum annuum HOM05D002826 ORTHO05D003105 5.4e-23 111.7 68 79.4
Hund06451 Selenicereus undatus HOM05D002826 ORTHO05D003105 9.2e-23 110.9 77 71.4
Psat3g175920 Pisum sativum HOM05D002826 ORTHO05D003105 1.6e-22 110.2 69 75.4
Atru.chr13.209 Acer truncatum HOM05D002826 ORTHO05D003105 1.3e-21 107.1 68 76.5
SEGI_27970 Sequoiadendron giganteum HOM05D002826 ORTHO05D003105 8.6e-21 104.4 77 67.5
arahy.Tifrunner.gnm1.ann1.9X5JNZ Arachis hypogaea HOM05D002826 ORTHO05D003105 2.8e-19 99.4 114 53.5
arahy.Tifrunner.gnm1.ann1.DU76ZX Arachis hypogaea HOM05D002826 ORTHO05D003105 2.8e-19 99.4 114 53.5
AagrBONN_evm.TU.Sc2ySwM_362.1913 Anthoceros agrestis HOM05D002826 ORTHO05D003105 3.1e-18 95.9 75 64.0
Mapoly0030s0011 Marchantia polymorpha HOM05D002826 ORTHO05D003105 9.2e-15 84.3 75 58.7
Pp3c5_3740 Physcomitrium patens HOM05D002826 ORTHO05D003105 1.2e-14 84.0 78 55.1
SMO170G0032 Selaginella moellendorffii HOM05D002826 ORTHO05D003105 1.6e-14 83.6 74 56.8
Lalb_Chr21g0306971 Lupinus albus HOM05D002826 ORTHO05D003105 3.6e-11 72.4 58 60.3
Psat6g234560 Pisum sativum HOM05D002826 ORTHO05D003105 8.0e-11 71.2 139 39.6
CiPaw.01G092300 Carya illinoinensis HOM05D002826 ORTHO05D003105 4.9e-08 62.0 67 53.7
Zm00001eb240610 Zea mays HOM05D002826 ORTHO05D003105 1.6e-06 57.0 52 53.8
Zm00001eb342600 Zea mays HOM05D002826 ORTHO05D003105 3.5e-06 55.8 83 44.6
CBR_g45372 Chara braunii HOM05D002826 ORTHO05D003105 7.8e-06 54.7 76 43.4


User provided reference genes

Program Settings