Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2649 Ceratophyllum demersum HOM05D002015 ORTHO05D002395 1.2e-67 259.6 123 100.0
CDE05G1398 Ceratophyllum demersum HOM05D002015 ORTHO05D002395 7.3e-49 197.2 125 79.2
QL10p038838 Quercus lobata HOM05D002015 ORTHO05D002395 4.0e-47 191.4 119 78.2
PGR102G1995 Punica granatum HOM05D002015 ORTHO05D002395 9.0e-47 190.3 121 76.0
Actinidia36587 Actinidia chinensis HOM05D002015 ORTHO05D002395 3.4e-46 188.3 120 76.7
AUR62016371 Chenopodium quinoa HOM05D002015 ORTHO05D002395 4.5e-46 188.0 120 76.7
MELO3C019619.2 Cucumis melo HOM05D002015 ORTHO05D002395 4.5e-46 188.0 117 76.9
CsaV3_6G013410 Cucumis sativus L. HOM05D002015 ORTHO05D002395 4.5e-46 188.0 117 76.9
CANSAT54G1710 Cannabis sativa HOM05D002015 ORTHO05D002395 5.8e-46 187.6 120 76.7
EL10Ac9g21932 Beta vulgaris HOM05D002015 ORTHO05D002395 7.6e-46 187.2 120 76.7
Oeu034383.2 Olea europaea HOM05D002015 ORTHO05D002395 7.6e-46 187.2 120 75.0
Cc00_g22800 Coffea canephora HOM05D002015 ORTHO05D002395 9.9e-46 186.8 120 75.8
CiPaw.03G253200 Carya illinoinensis HOM05D002015 ORTHO05D002395 1.3e-45 186.4 119 75.6
AUR62011551 Chenopodium quinoa HOM05D002015 ORTHO05D002395 1.3e-45 186.4 120 75.8
Lj4A816T49 Lonicera japonica HOM05D002015 ORTHO05D002395 1.3e-45 186.4 120 76.7
Dinv20711 Davidia involucrata HOM05D002015 ORTHO05D002395 1.7e-45 186.0 120 75.0
arahy.Tifrunner.gnm1.ann1.FX45DR Arachis hypogaea HOM05D002015 ORTHO05D002395 2.2e-45 185.7 120 75.0
Lj4g0012822 Lotus japonicus HOM05D002015 ORTHO05D002395 2.2e-45 185.7 120 75.8
SEGI_30429 Sequoiadendron giganteum HOM05D002015 ORTHO05D002395 2.2e-45 185.7 120 75.8
Sc09g0004310 Simmondsia chinensis HOM05D002015 ORTHO05D002395 2.2e-45 185.7 120 75.0
Nn7g38228 Nelumbo nucifera HOM05D002015 ORTHO05D002395 2.9e-45 185.3 120 75.0
SGA_v2.0_scaffold54G19577 Striga asiatica HOM05D002015 ORTHO05D002395 2.9e-45 185.3 120 75.0
Thecc.01G237100 Theobroma cacao HOM05D002015 ORTHO05D002395 2.9e-45 185.3 120 75.0
Atru.chr4.1149 Acer truncatum HOM05D002015 ORTHO05D002395 3.8e-45 184.9 120 75.8
Haze_25423 Corylus avellana HOM05D002015 ORTHO05D002395 3.8e-45 184.9 129 72.1
Eucgr.H05051 Eucalyptus grandis HOM05D002015 ORTHO05D002395 3.8e-45 184.9 120 75.0
TPR.G12901 Trifolium pratense HOM05D002015 ORTHO05D002395 3.8e-45 184.9 120 75.0
COL.COLO4_04700 Corchorus olitorius HOM05D002015 ORTHO05D002395 4.9e-45 184.5 120 75.0
FAN02G0045 Fragaria x ananassa HOM05D002015 ORTHO05D002395 4.9e-45 184.5 117 76.1
FAN05G5628 Fragaria x ananassa HOM05D002015 ORTHO05D002395 4.9e-45 184.5 117 76.1
FAN09G0141 Fragaria x ananassa HOM05D002015 ORTHO05D002395 4.9e-45 184.5 117 76.1
FAN14G1337 Fragaria x ananassa HOM05D002015 ORTHO05D002395 4.9e-45 184.5 117 76.1
Lalb_Chr07g0184031 Lupinus albus HOM05D002015 ORTHO05D002395 4.9e-45 184.5 120 75.0
Sed0000399 Sechium edule HOM05D002015 ORTHO05D002395 4.9e-45 184.5 117 76.9
Sed0021813 Sechium edule HOM05D002015 ORTHO05D002395 4.9e-45 184.5 111 78.4
GSVIVG01022426001 Vitis vinifera HOM05D002015 ORTHO05D002395 4.9e-45 184.5 120 75.0
CSS0012423 Camellia sinensis var. sinensis HOM05D002015 ORTHO05D002395 6.4e-45 184.1 120 75.0
TWI79G0872 Tripterygium wilfordii HOM05D002015 ORTHO05D002395 6.4e-45 184.1 117 76.9
CAN.G148.11 Capsicum annuum HOM05D002015 ORTHO05D002395 8.4e-45 183.7 120 75.0
Duzib187G1484 Durio zibethinus HOM05D002015 ORTHO05D002395 8.4e-45 183.7 120 74.2
Hma1.2p1_0057F.1_g032120 Hydrangea macrophylla HOM05D002015 ORTHO05D002395 8.4e-45 183.7 119 75.6
ATR0753G032 Amborella trichopoda HOM05D002015 ORTHO05D002395 1.1e-44 183.3 120 75.0
Psat7g042040 Pisum sativum HOM05D002015 ORTHO05D002395 1.1e-44 183.3 120 73.3
Aqoxy6G00054 Aquilegia oxysepala HOM05D002015 ORTHO05D002395 1.4e-44 183.0 120 74.2
Gorai.003G066400 Gossypium raimondii HOM05D002015 ORTHO05D002395 1.4e-44 183.0 120 74.2
DCAR_026834 Daucus carota HOM05D002015 ORTHO05D002395 1.9e-44 182.6 120 74.2
Medtr8g095320 Medicago truncatula HOM05D002015 ORTHO05D002395 1.9e-44 182.6 120 73.3
Prupe.6G357500 Prunus persica HOM05D002015 ORTHO05D002395 1.9e-44 182.6 120 75.8
TAR376G0144 Trochodendron aralioides HOM05D002015 ORTHO05D002395 1.9e-44 182.6 120 75.0
DCAR_023536 Daucus carota HOM05D002015 ORTHO05D002395 2.4e-44 182.2 120 75.0
Sopen05g015850 Solanum pennellii HOM05D002015 ORTHO05D002395 2.4e-44 182.2 120 73.3
TAR628G0593 Trochodendron aralioides HOM05D002015 ORTHO05D002395 2.4e-44 182.2 120 75.0
Ca_17592_v3 Cicer arietinum L. HOM05D002015 ORTHO05D002395 3.2e-44 181.8 120 74.2
Glyma.05G197600 Glycine max HOM05D002015 ORTHO05D002395 3.2e-44 181.8 120 75.0
Os05g0361200 Oryza sativa ssp. japonica HOM05D002015 ORTHO05D002395 3.2e-44 181.8 120 73.3
VMungo0251G0443 Vigna mungo HOM05D002015 ORTHO05D002395 3.2e-44 181.8 120 75.0
Solyc05g018650.4 Solanum lycopersicum HOM05D002015 ORTHO05D002395 4.2e-44 181.4 119 73.1
unitig_744.g23970 Utricularia gibba HOM05D002015 ORTHO05D002395 4.2e-44 181.4 120 74.2
Manes.13G076501 Manihot esculenta HOM05D002015 ORTHO05D002395 5.4e-44 181.0 120 73.3
TWI31G0257 Tripterygium wilfordii HOM05D002015 ORTHO05D002395 5.4e-44 181.0 120 72.5
Gohir.D11G232400 Gossypium hirsutum HOM05D002015 ORTHO05D002395 7.1e-44 180.6 120 73.3
MD04G1239600 Malus domestica HOM05D002015 ORTHO05D002395 7.1e-44 180.6 120 74.2
MD12G1256700 Malus domestica HOM05D002015 ORTHO05D002395 7.1e-44 180.6 120 74.2
Phvul.002G278100 Phaseolus vulgaris HOM05D002015 ORTHO05D002395 7.1e-44 180.6 120 74.2
RcHm_v2.0_Chr3g0448431 Rosa chinensis HOM05D002015 ORTHO05D002395 9.3e-44 180.3 117 75.2
Lsat_1_v5_gn_2_36961 Lactuca sativa HOM05D002015 ORTHO05D002395 1.2e-43 179.9 117 73.5
Ciclev10025338m.g Citrus clementina HOM05D002015 ORTHO05D002395 1.6e-43 179.5 120 72.5
Potri.T010900 Populus trichocarpa HOM05D002015 ORTHO05D002395 1.6e-43 179.5 116 75.0
Potri.T010901 Populus trichocarpa HOM05D002015 ORTHO05D002395 1.6e-43 179.5 116 75.0
Lalb_Chr12g0202801 Lupinus albus HOM05D002015 ORTHO05D002395 2.1e-43 179.1 120 71.7
PSO017G5697 Papaver somniferum HOM05D002015 ORTHO05D002395 2.7e-43 178.7 118 73.7
PSO170G6825 Papaver somniferum HOM05D002015 ORTHO05D002395 2.7e-43 178.7 118 73.7
Sabra19G0002900 Salix brachista HOM05D002015 ORTHO05D002395 2.7e-43 178.7 116 75.0
Sabra19G0009300 Salix brachista HOM05D002015 ORTHO05D002395 2.7e-43 178.7 120 72.5
Zm00001eb244110 Zea mays HOM05D002015 ORTHO05D002395 3.5e-43 178.3 120 72.5
Gohir.A05G375550 Gossypium hirsutum HOM05D002015 ORTHO05D002395 4.6e-43 177.9 120 72.5
Gohir.D04G040200 Gossypium hirsutum HOM05D002015 ORTHO05D002395 4.6e-43 177.9 120 72.5
Gorai.012G045300 Gossypium raimondii HOM05D002015 ORTHO05D002395 4.6e-43 177.9 120 72.5
THA.LOC104819475 Tarenaya hassleriana HOM05D002015 ORTHO05D002395 4.6e-43 177.9 117 74.4
Glyma.08G005000 Glycine max HOM05D002015 ORTHO05D002395 7.9e-43 177.2 120 73.3
ClCG02G018770 Citrullus lanatus HOM05D002015 ORTHO05D002395 5.1e-42 174.5 141 63.8
Nitab4.5_0001557g0010 Nicotiana tabacum HOM05D002015 ORTHO05D002395 8.7e-42 173.7 114 73.7
Potri.004G138400 Populus trichocarpa HOM05D002015 ORTHO05D002395 8.7e-42 173.7 120 71.7
CARHR123740 Cardamine hirsuta HOM05D002015 ORTHO05D002395 1.5e-41 172.9 117 72.6
Aa31LG5G9230 Aethionema arabicum HOM05D002015 ORTHO05D002395 1.9e-41 172.6 116 73.3
AL4G25250 Arabidopsis lyrata HOM05D002015 ORTHO05D002395 2.5e-41 172.2 116 73.3
AT2G30390 Arabidopsis thaliana HOM05D002015 ORTHO05D002395 2.5e-41 172.2 116 73.3
Carub.0004s1154 Capsella rubella HOM05D002015 ORTHO05D002395 2.5e-41 172.2 116 73.3
Migut.H00791 Erythranthe guttata HOM05D002015 ORTHO05D002395 2.5e-41 172.2 117 70.1
Thhalv10001248m.g Eutrema salsugineum HOM05D002015 ORTHO05D002395 2.5e-41 172.2 116 73.3
Sp4g08120 Schrenkiella parvula HOM05D002015 ORTHO05D002395 2.5e-41 172.2 116 73.3
Mapoly0046s0095 Marchantia polymorpha HOM05D002015 ORTHO05D002395 3.3e-41 171.8 120 70.8
Pp3c2_31600 Physcomitrium patens HOM05D002015 ORTHO05D002395 3.3e-41 171.8 120 70.0
BcaB08g35290 Brassica carinata HOM05D002015 ORTHO05D002395 5.6e-41 171.0 116 72.4
BcaC07g40814 Brassica carinata HOM05D002015 ORTHO05D002395 5.6e-41 171.0 116 72.4
BolC8t51382H Brassica oleracea HOM05D002015 ORTHO05D002395 5.6e-41 171.0 116 72.4
BraA09t40922Z Brassica rapa HOM05D002015 ORTHO05D002395 5.6e-41 171.0 116 72.4
ECA238G3540 Erigeron canadensis HOM05D002015 ORTHO05D002395 5.6e-41 171.0 117 70.9
Peaxi162Scf00090g00207 Petunia axillaris HOM05D002015 ORTHO05D002395 1.3e-40 169.9 112 74.1
CiPaw.04G178800 Carya illinoinensis HOM05D002015 ORTHO05D002395 2.8e-40 168.7 115 73.0
Pp3c1_7090 Physcomitrium patens HOM05D002015 ORTHO05D002395 8.1e-40 167.2 120 67.5
Pp3c1_7091 Physcomitrium patens HOM05D002015 ORTHO05D002395 8.1e-40 167.2 120 67.5
Glyma.04G205600 Glycine max HOM05D002015 ORTHO05D002395 2.4e-39 165.6 120 68.3
Phvul.009G157600 Phaseolus vulgaris HOM05D002015 ORTHO05D002395 3.1e-39 165.2 120 68.3
Lj1g0005010 Lotus japonicus HOM05D002015 ORTHO05D002395 4.0e-39 164.9 120 66.7
VMungo1309G2123 Vigna mungo HOM05D002015 ORTHO05D002395 4.0e-39 164.9 120 67.5
CBR_g28825 Chara braunii HOM05D002015 ORTHO05D002395 6.9e-39 164.1 120 65.0
Glyma.06G159900 Glycine max HOM05D002015 ORTHO05D002395 9.0e-39 163.7 120 68.3
Ah.01g020790 Amaranthus hybridus HOM05D002015 ORTHO05D002395 2.0e-38 162.5 111 72.1
Oeu053135.2 Olea europaea HOM05D002015 ORTHO05D002395 9.9e-38 160.2 113 71.7
Actinidia19953 Actinidia chinensis HOM05D002015 ORTHO05D002395 1.7e-37 159.5 104 76.9
SMO367G0693 Selaginella moellendorffii HOM05D002015 ORTHO05D002395 8.4e-37 157.1 116 65.5
Medtr3g097290 Medicago truncatula HOM05D002015 ORTHO05D002395 9.3e-36 153.7 121 66.1
TPR.G28696 Trifolium pratense HOM05D002015 ORTHO05D002395 9.3e-36 153.7 121 66.9
unitig_21.g20950 Utricularia gibba HOM05D002015 ORTHO05D002395 9.3e-36 153.7 112 68.8
Psat5g057560 Pisum sativum HOM05D002015 ORTHO05D002395 3.5e-35 151.8 115 66.1
Cfa002244 Carpinus fangiana HOM05D002015 ORTHO05D002395 1.0e-34 150.2 76 92.1
Hund06575 Selenicereus undatus HOM05D002015 ORTHO05D002395 3.9e-34 148.3 101 74.3
Pp3c11_6350 Physcomitrium patens HOM05D002015 ORTHO05D002395 9.6e-33 143.7 120 59.2
HPP92_004645 Vanilla planifolia HOM05D002015 ORTHO05D002395 4.0e-31 138.3 101 68.3
A09p55140 Brassica napus HOM05D001978 ORTHO05D003036 2.0e-30 136.0 102 67.6
C08p38070 Brassica napus HOM05D001978 ORTHO05D003036 2.0e-30 136.0 102 67.6
vmacro12732 Vaccinium macrocarpon HOM05D002015 ORTHO05D002395 6.5e-29 131.0 64 95.3
PRCOL_00003592 Prasinoderma coloniale HOM05D002015 ORTHO05D002395 3.7e-24 115.2 113 50.4
Cre07.g339750 Chlamydomonas reinhardtii HOM05D002015 ORTHO05D002395 1.5e-17 93.2 166 34.9
Medtr4g087690 Medicago truncatula HOM05D002015 ORTHO05D002395 1.1e-12 77.0 66 62.1


User provided reference genes

Program Settings