Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2632 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 5.5e-276 953.7 501 100.0
CDE11G0983 Ceratophyllum demersum HOM05D003929 ORTHO05D004499 5.8e-209 731.1 505 79.2
TAR374G1605 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.2e-100 371.3 529 49.1
GSVIVG01007750001 Vitis vinifera HOM05D003929 ORTHO05D004499 1.0e-96 358.2 510 48.0
TAR622G0564 Trochodendron aralioides HOM05D003929 ORTHO05D004499 1.1e-95 354.8 532 46.4
Aqoxy3G02955 Aquilegia oxysepala HOM05D003929 ORTHO05D004499 5.6e-95 352.4 529 47.3
PSO063G6021 Papaver somniferum HOM05D003929 ORTHO05D004499 2.3e-93 347.1 505 45.3
Nitab4.5_0001017g0080 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.4e-90 337.8 504 45.2
ECA232G3264 Erigeron canadensis HOM05D003929 ORTHO05D004499 6.0e-89 332.4 514 44.9
FAN13G1321 Fragaria x ananassa HOM05D003929 ORTHO05D004499 3.9e-88 329.7 514 45.9
Hma1.2p1_0176F.1_g077430 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 1.1e-87 328.2 493 45.4
FAN18G3294 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.5e-87 327.8 524 45.4
QL10p011722 Quercus lobata HOM05D003929 ORTHO05D004499 1.5e-87 327.8 513 44.6
Dinv20657 Davidia involucrata HOM05D003929 ORTHO05D004499 3.3e-87 326.6 541 43.8
RcHm_v2.0_Chr7g0193581 Rosa chinensis HOM05D003929 ORTHO05D004499 3.3e-87 326.6 496 46.6
FvH4_5g05290 Fragaria vesca HOM05D003929 ORTHO05D004499 5.6e-87 325.9 514 45.5
CAN.G628.79 Capsicum annuum HOM05D003929 ORTHO05D004499 7.3e-87 325.5 532 42.9
FAN18G3765 Fragaria x ananassa HOM05D003929 ORTHO05D004499 7.3e-87 325.5 524 45.4
CSS0017959 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 9.5e-87 325.1 479 45.5
PGSC0003DMG400027090 Solanum tuberosum HOM05D003929 ORTHO05D004499 1.6e-86 324.3 531 44.4
SalBow5G2324 Salvia bowleyana HOM05D003929 ORTHO05D004499 2.1e-86 323.9 487 45.0
CiPaw.11G026500 Carya illinoinensis HOM05D003929 ORTHO05D004499 8.0e-86 322.0 523 43.2
FAN04G3176 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.4e-85 321.2 533 43.9
Solyc06g071470.4 Solanum lycopersicum HOM05D003929 ORTHO05D004499 1.4e-85 321.2 530 44.3
MBI10_g41915_MAGBIO Magnolia biondii HOM05D003929 ORTHO05D004499 2.3e-85 320.5 526 44.3
Peaxi162Scf00017g02914 Petunia axillaris HOM05D003929 ORTHO05D004499 2.3e-85 320.5 532 44.0
CAN.G781.12 Capsicum annuum HOM05D003929 ORTHO05D004499 8.9e-85 318.5 507 43.6
DCAR_026132 Daucus carota HOM05D003929 ORTHO05D004499 7.5e-84 315.5 527 43.8
Duzib068G1333 Durio zibethinus HOM05D003929 ORTHO05D004499 1.3e-83 314.7 512 44.7
Cpa.g.sc770.1 Carica papaya HOM05D003929 ORTHO05D004499 1.7e-83 314.3 492 46.1
Sopen06g027750 Solanum pennellii HOM05D003929 ORTHO05D004499 2.2e-83 313.9 530 43.6
Atru.chr9.2475 Acer truncatum HOM05D003929 ORTHO05D004499 4.9e-83 312.8 475 45.7
BcaB02g09694 Brassica carinata HOM05D003929 ORTHO05D004499 6.4e-83 312.4 449 45.9
HanXRQChr16g0504021 Helianthus annuus HOM05D003929 ORTHO05D004499 6.4e-83 312.4 487 45.0
Gohir.A12G274000 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.1e-82 311.6 536 42.4
Gohir.D12G274700 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.1e-82 311.6 534 42.5
Gorai.008G295200 Gossypium raimondii HOM05D003929 ORTHO05D004499 1.4e-82 311.2 530 42.8
Rhsim08G0171800 Rhododendron simsii HOM05D003929 ORTHO05D004499 1.4e-82 311.2 525 43.4
Dinv02898 Davidia involucrata HOM05D003929 ORTHO05D004499 4.1e-82 309.7 534 42.5
TWI14G0242 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 4.1e-82 309.7 544 42.5
Glyma.06G182600 Glycine max HOM05D003929 ORTHO05D004499 5.4e-82 309.3 477 44.4
Nn1g01975 Nelumbo nucifera HOM05D003929 ORTHO05D004499 5.4e-82 309.3 509 45.2
Prupe.5G174100 Prunus persica HOM05D003929 ORTHO05D004499 9.2e-82 308.5 491 44.8
Sp2g25960 Schrenkiella parvula HOM05D003929 ORTHO05D004499 2.7e-81 307.0 500 42.4
Aa31LG11G880 Aethionema arabicum HOM05D003929 ORTHO05D004499 3.5e-81 306.6 486 43.6
BraA06t25903Z Brassica rapa HOM05D003929 ORTHO05D004499 6.0e-81 305.8 476 43.9
Oeu016382.1 Olea europaea HOM05D003929 ORTHO05D004499 6.0e-81 305.8 515 42.1
PSO832G4520 Papaver somniferum HOM05D003929 ORTHO05D004499 7.8e-81 305.4 505 42.6
ClCG06G017000 Citrullus lanatus HOM05D003929 ORTHO05D004499 1.0e-80 305.1 530 42.3
A06p29570 Brassica napus HOM05D003929 ORTHO05D004499 2.3e-80 303.9 472 43.6
Lj5C124G9 Lonicera japonica HOM05D003929 ORTHO05D004499 3.0e-80 303.5 517 42.9
Manes.14G066000 Manihot esculenta HOM05D003929 ORTHO05D004499 5.1e-80 302.8 535 43.4
PGR083G1389 Punica granatum HOM05D003929 ORTHO05D004499 5.1e-80 302.8 531 41.8
Thhalv10004017m.g Eutrema salsugineum HOM05D003929 ORTHO05D004499 6.6e-80 302.4 496 42.1
Sed0022246 Sechium edule HOM05D003929 ORTHO05D004499 6.6e-80 302.4 540 40.0
MSTRG.11449 Avicennia marina HOM05D003929 ORTHO05D004499 8.6e-80 302.0 524 41.4
C03p63930 Brassica napus HOM05D003929 ORTHO05D004499 8.6e-80 302.0 487 42.9
BolC9t53798H Brassica oleracea HOM05D003929 ORTHO05D004499 8.6e-80 302.0 483 41.8
Lsat_1_v5_gn_4_75281 Lactuca sativa HOM05D003929 ORTHO05D004499 8.6e-80 302.0 491 42.8
THA.LOC104821459 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 1.5e-79 301.2 425 48.7
BcaC01g02523 Brassica carinata HOM05D003929 ORTHO05D004499 1.9e-79 300.8 487 42.7
BcaC04g23392 Brassica carinata HOM05D003929 ORTHO05D004499 3.3e-79 300.1 483 41.6
C09p08860 Brassica napus HOM05D003929 ORTHO05D004499 3.3e-79 300.1 465 42.4
Nitab4.5_0009783g0030 Nicotiana tabacum HOM05D003929 ORTHO05D004499 3.3e-79 300.1 490 42.7
Manes.06G104600 Manihot esculenta HOM05D003929 ORTHO05D004499 5.6e-79 299.3 521 44.0
arahy.Tifrunner.gnm1.ann1.S02CG0 Arachis hypogaea HOM05D003929 ORTHO05D004499 7.3e-79 298.9 514 42.0
Duzib205G0135 Durio zibethinus HOM05D003929 ORTHO05D004499 9.5e-79 298.5 498 43.8
BolC3t18647H Brassica oleracea HOM05D003929 ORTHO05D004499 1.2e-78 298.1 487 42.5
Carub.0008s2353 Capsella rubella HOM05D003929 ORTHO05D004499 1.2e-78 298.1 508 41.1
CARHR276590 Cardamine hirsuta HOM05D003929 ORTHO05D004499 1.2e-78 298.1 492 41.1
AL8G39770 Arabidopsis lyrata HOM05D003929 ORTHO05D004499 1.6e-78 297.7 497 41.6
arahy.Tifrunner.gnm1.ann1.R24CC5 Arachis hypogaea HOM05D003929 ORTHO05D004499 2.1e-78 297.4 521 42.0
Lalb_Chr13g0297821 Lupinus albus HOM05D003929 ORTHO05D004499 2.1e-78 297.4 499 42.5
Cc04_g14000 Coffea canephora HOM05D003929 ORTHO05D004499 3.6e-78 296.6 511 41.7
VMungo1309G0717 Vigna mungo HOM05D003929 ORTHO05D004499 3.6e-78 296.6 485 42.7
TPR.G37553 Trifolium pratense HOM05D003929 ORTHO05D004499 6.2e-78 295.8 475 44.0
Potri.012G080800 Populus trichocarpa HOM05D003929 ORTHO05D004499 1.1e-77 295.0 471 44.6
AT5G62810 Arabidopsis thaliana HOM05D003929 ORTHO05D004499 1.4e-77 294.7 500 41.0
MD14G1180600 Malus domestica HOM05D003929 ORTHO05D004499 1.8e-77 294.3 448 46.4
Potri.015G076100 Populus trichocarpa HOM05D003929 ORTHO05D004499 2.3e-77 293.9 455 45.3
CANSAT80G0843 Cannabis sativa HOM05D003929 ORTHO05D004499 4.0e-77 293.1 531 42.0
Hund09434 Selenicereus undatus HOM05D003929 ORTHO05D004499 6.8e-77 292.4 536 40.3
MELO3C026291.2 Cucumis melo HOM05D003929 ORTHO05D004499 8.9e-77 292.0 529 41.0
A09p07860 Brassica napus HOM05D003929 ORTHO05D004499 1.5e-76 291.2 463 42.3
BraA09t36437Z Brassica rapa HOM05D003929 ORTHO05D004499 1.5e-76 291.2 449 43.0
Lalb_Chr11g0071231 Lupinus albus HOM05D003929 ORTHO05D004499 2.0e-76 290.8 496 41.3
EL10Ac5g10751 Beta vulgaris HOM05D003929 ORTHO05D004499 4.4e-76 289.7 484 42.4
Phvul.009G178800 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 4.4e-76 289.7 484 42.1
MD06G1174100 Malus domestica HOM05D003929 ORTHO05D004499 5.8e-76 289.3 446 45.5
Eucgr.B00317 Eucalyptus grandis HOM05D003929 ORTHO05D004499 2.2e-75 287.3 492 41.9
CsaV3_1G001520 Cucumis sativus L. HOM05D003929 ORTHO05D004499 6.4e-75 285.8 532 40.8
TWI39G0937 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 6.4e-75 285.8 518 41.9
Medtr4g106880 Medicago truncatula HOM05D003929 ORTHO05D004499 2.4e-74 283.9 509 41.7
THA.LOC104818232 Tarenaya hassleriana HOM05D003929 ORTHO05D004499 2.4e-74 283.9 428 46.3
Thecc.03G012300 Theobroma cacao HOM05D003929 ORTHO05D004499 5.4e-74 282.7 517 41.8
TWI31G0970 Tripterygium wilfordii HOM05D003929 ORTHO05D004499 7.1e-74 282.3 518 42.3
FAN08G2589 Fragaria x ananassa HOM05D003929 ORTHO05D004499 2.1e-73 280.8 513 42.7
Migut.I00015 Erythranthe guttata HOM05D003929 ORTHO05D004499 2.7e-73 280.4 496 41.7
Lj1g0005514 Lotus japonicus HOM05D003929 ORTHO05D004499 2.7e-73 280.4 479 43.2
Cfa019114 Carpinus fangiana HOM05D003929 ORTHO05D004499 3.5e-73 280.0 550 40.0
Lj4g0023186 Lotus japonicus HOM05D003929 ORTHO05D004499 1.3e-72 278.1 480 43.8
ATR0730G040 Amborella trichopoda HOM05D003929 ORTHO05D004499 2.3e-72 277.3 545 39.1
CiPaw.12G026400 Carya illinoinensis HOM05D003929 ORTHO05D004499 1.1e-71 275.0 518 41.1
Solyc03g114330.3 Solanum lycopersicum HOM05D003929 ORTHO05D004499 1.9e-71 274.2 500 40.0
HPP92_021833 Vanilla planifolia HOM05D003929 ORTHO05D004499 1.6e-70 271.2 386 46.4
Nitab4.5_0007719g0020 Nicotiana tabacum HOM05D003929 ORTHO05D004499 2.1e-70 270.8 500 39.8
vmacro19383 Vaccinium macrocarpon HOM05D003929 ORTHO05D004499 8.1e-70 268.9 489 39.5
Ciclev10024320m.g Citrus clementina HOM05D003929 ORTHO05D004499 1.4e-69 268.1 373 50.1
SEGI_11105 Sequoiadendron giganteum HOM05D003929 ORTHO05D004499 4.0e-69 266.5 598 36.5
Glyma.05G037400 Glycine max HOM05D003929 ORTHO05D004499 6.8e-69 265.8 459 42.0
AUR62030967 Chenopodium quinoa HOM05D003929 ORTHO05D004499 2.0e-68 264.2 522 40.0
Ca_21916_v3 Cicer arietinum L. HOM05D003929 ORTHO05D004499 7.6e-68 262.3 453 42.8
Peaxi162Scf00689g00222 Petunia axillaris HOM05D003929 ORTHO05D004499 9.9e-68 261.9 531 38.6
Psat4g057880 Pisum sativum HOM05D003929 ORTHO05D004499 8.4e-67 258.8 363 46.3
Glyma.17G089700 Glycine max HOM05D003929 ORTHO05D004499 1.1e-66 258.5 474 41.6
Sc04g0001820 Simmondsia chinensis HOM05D003929 ORTHO05D004499 1.4e-66 258.1 381 47.2
SGA_v2.0_scaffold90G27941 Striga asiatica HOM05D003929 ORTHO05D004499 1.4e-66 258.1 465 41.7
Phvul.003G200200 Phaseolus vulgaris HOM05D003929 ORTHO05D004499 2.3e-64 250.8 470 41.5
PGR044G0511 Punica granatum HOM05D003929 ORTHO05D004499 5.1e-64 249.6 500 39.0
Sed0009068 Sechium edule HOM05D003929 ORTHO05D004499 7.3e-63 245.7 385 46.0
AUR62008214 Chenopodium quinoa HOM05D003929 ORTHO05D004499 1.3e-62 245.0 416 42.3
Atru.chr11.2035 Acer truncatum HOM05D003929 ORTHO05D004499 1.6e-62 244.6 432 42.1
Actinidia33066 Actinidia chinensis HOM05D003929 ORTHO05D004499 2.8e-62 243.8 413 41.9
Sopen03g033430 Solanum pennellii HOM05D003929 ORTHO05D004499 3.6e-62 243.4 498 38.2
Ah.11g051630 Amaranthus hybridus HOM05D003618 ORTHO05D004302 4.8e-62 243.0 532 36.5
VMungo1215G1851 Vigna mungo HOM05D003929 ORTHO05D004499 6.2e-62 242.7 494 39.3
SalBow5G2758 Salvia bowleyana HOM05D003929 ORTHO05D004499 3.1e-61 240.4 479 37.0
Haze_07467 Corylus avellana HOM05D003929 ORTHO05D004499 5.3e-61 239.6 609 35.5
Hma1.2p1_0000F.1_g000890 Hydrangea macrophylla HOM05D003929 ORTHO05D004499 4.4e-60 236.5 502 37.5
Migut.D01928 Erythranthe guttata HOM05D003929 ORTHO05D004499 8.4e-59 232.3 463 38.7
Lalb_Chr07g0182721 Lupinus albus HOM05D003929 ORTHO05D004499 8.7e-56 222.2 453 39.5
Oeu024692.2 Olea europaea HOM05D003929 ORTHO05D004499 3.6e-54 216.9 277 51.6
Actinidia19318 Actinidia chinensis HOM05D003929 ORTHO05D004499 2.0e-52 211.1 367 40.9
Nitab4.5_0000003g0590 Nicotiana tabacum HOM05D003929 ORTHO05D004499 1.3e-51 208.4 499 35.1
arahy.Tifrunner.gnm1.ann1.W2DQVT Arachis hypogaea HOM05D003929 ORTHO05D004499 1.4e-50 204.9 531 35.4
CSS0023375 Camellia sinensis var. sinensis HOM05D003929 ORTHO05D004499 3.2e-50 203.8 245 51.4
Thecc.02G250700 Theobroma cacao HOM05D003929 ORTHO05D004499 1.0e-48 198.7 375 37.3
COL.COLO4_30035 Corchorus olitorius HOM05D003929 ORTHO05D004499 3.9e-48 196.8 528 34.1
Zm00001eb356320 Zea mays HOM05D003929 ORTHO05D004499 6.7e-48 196.1 462 34.2
unitig_749.g13474 Utricularia gibba HOM05D003929 ORTHO05D004499 3.3e-47 193.7 397 35.5
COL.COLO4_24172 Corchorus olitorius HOM05D003929 ORTHO05D004499 1.8e-45 188.0 397 37.5
Zm00001eb267680 Zea mays HOM05D003929 ORTHO05D004499 1.8e-45 188.0 466 33.0
Gohir.A03G139300 Gossypium hirsutum HOM05D003929 ORTHO05D004499 3.8e-43 180.3 336 37.2
Os05g0101200 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 7.9e-41 172.6 431 34.1
Gohir.D02G162200 Gossypium hirsutum HOM05D003929 ORTHO05D004499 1.9e-39 167.9 337 37.4
Gorai.005G182200 Gossypium raimondii HOM05D003929 ORTHO05D004499 5.7e-39 166.4 337 37.4
Psat4g209200 Pisum sativum HOM05D003929 ORTHO05D004499 1.6e-38 164.9 307 40.7
Zm00001eb126680 Zea mays HOM05D003929 ORTHO05D004499 2.9e-35 154.1 427 33.7
Mapoly0102s0017 Marchantia polymorpha HOM05D003929 ORTHO05D004499 6.5e-35 152.9 231 43.7
Os01g0107000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 3.5e-33 147.1 203 43.3
PSO135G0191 Papaver somniferum HOM05D003929 ORTHO05D004499 6.7e-32 142.9 188 50.0
Lj9A449T48 Lonicera japonica HOM05D003929 ORTHO05D004499 1.1e-29 135.6 211 44.1
Oeu022163.1 Olea europaea HOM05D003929 ORTHO05D004499 1.2e-28 132.1 251 39.0
Hund02741 Selenicereus undatus HOM05D003929 ORTHO05D004499 7.7e-28 129.4 432 31.5
CBR_g3508 Chara braunii HOM05D003929 ORTHO05D004499 1.3e-27 128.6 280 35.4
Pp3c9_20380 Physcomitrium patens HOM05D003929 ORTHO05D004499 1.4e-26 125.2 248 38.3
Pp3c15_21860 Physcomitrium patens HOM05D003929 ORTHO05D004499 3.2e-26 124.0 209 39.7
PGR044G1312 Punica granatum HOM05D003929 ORTHO05D004499 7.9e-25 119.4 191 42.9
HanXRQChr16g0526511 Helianthus annuus HOM05D004647 ORTHO05D005349 3.0e-24 117.5 184 44.6
AagrBONN_evm.TU.Sc2ySwM_117.2261 Anthoceros agrestis HOM05D003929 ORTHO05D004499 1.4e-21 108.6 193 38.9
SHI17029 Sapria himalayana HOM05D003929 ORTHO05D004499 6.9e-21 106.3 140 47.1
FAN24G3310 Fragaria x ananassa HOM05D003929 ORTHO05D004499 1.3e-19 102.1 131 51.9
Lj9A449G50 Lonicera japonica HOM05D003929 ORTHO05D004499 2.5e-18 97.8 121 51.2
PGSC0003DMG400024502 Solanum tuberosum HOM05D003929 ORTHO05D004499 9.4e-18 95.9 105 55.2
SHI17030 Sapria himalayana HOM05D003929 ORTHO05D004499 3.6e-17 94.0 76 59.2
Nitab4.5_0000866g0190 Nicotiana tabacum HOM05D003929 ORTHO05D004499 7.9e-17 92.8 119 46.2
Cfa019127 Carpinus fangiana HOM05D003929 ORTHO05D004499 1.7e-14 85.1 167 38.3
ClCG01G013120 Citrullus lanatus HOM05D003929 ORTHO05D004499 2.0e-12 78.2 117 41.0
CBR_g10793 Chara braunii HOM05D027206 ORTHO05D004499 4.5e-12 77.0 94 45.7
Actinidia19319 Actinidia chinensis HOM05D003618 ORTHO05D004302 5.9e-12 76.6 202 34.2
Zm00001eb296750 Zea mays HOM05D003929 ORTHO05D004499 1.0e-11 75.9 71 59.2
Cre10.g454025 Chlamydomonas reinhardtii HOM05D003929 ORTHO05D004499 3.2e-10 70.9 81 53.1
Os05g0578000 Oryza sativa ssp. japonica HOM05D003929 ORTHO05D004499 9.4e-10 69.3 87 49.4
MCO04G191 Micromonas commoda HOM05D003929 ORTHO05D004499 5.2e-08 63.5 402 23.6
CBR_g3506 Chara braunii HOM05D003929 ORTHO05D004499 2.6e-07 61.2 60 53.3
AagrBONN_evm.TU.Sc2ySwM_117.2262 Anthoceros agrestis HOM05D003929 ORTHO05D004499 7.4e-07 59.7 47 59.6
arahy.Tifrunner.gnm1.ann1.49JIZL Arachis hypogaea HOM05D003929 ORTHO05D004499 9.7e-07 59.3 240 30.4


User provided reference genes

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