Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2620 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 7.7e-158 560.5 288 100.0
CDE05G2026 Ceratophyllum demersum HOM05D006486 ORTHO05D007888 9.6e-108 394.0 256 80.1
arahy.Tifrunner.gnm1.ann1.3M60GY Arachis hypogaea HOM05D006486 ORTHO05D007888 2.3e-29 133.7 264 39.4
Prupe.4G037000 Prunus persica HOM05D006486 ORTHO05D007888 2.9e-27 126.7 261 36.4
arahy.Tifrunner.gnm1.ann1.4FF3SU Arachis hypogaea HOM05D006486 ORTHO05D007888 4.9e-27 125.9 268 36.9
Nn1g06762 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.3e-27 125.2 248 39.5
Lj4g0025313 Lotus japonicus HOM05D006486 ORTHO05D007888 1.8e-26 124.0 248 38.7
TAR624G1400 Trochodendron aralioides HOM05D006486 ORTHO05D007888 9.2e-26 121.7 266 36.1
RcHm_v2.0_Chr5g0006301 Rosa chinensis HOM05D006486 ORTHO05D007888 2.0e-25 120.6 251 38.6
Glyma.15G067400 Glycine max HOM05D006486 ORTHO05D007888 7.8e-25 118.6 247 36.8
MD10G1303500 Malus domestica HOM05D006486 ORTHO05D007888 1.3e-24 117.9 257 37.7
TPR.G36802 Trifolium pratense HOM05D006486 ORTHO05D007888 1.3e-24 117.9 251 39.4
FAN16G2112 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.9e-24 116.3 263 37.3
CANSAT56G1095 Cannabis sativa HOM05D006486 ORTHO05D007888 1.5e-23 114.4 295 33.6
Lalb_Chr20g0122301 Lupinus albus HOM05D006486 ORTHO05D007888 1.5e-23 114.4 252 36.9
Glyma.13G246500 Glycine max HOM05D006486 ORTHO05D007888 2.5e-23 113.6 247 36.4
QL04p018235 Quercus lobata HOM05D006486 ORTHO05D007888 5.6e-23 112.5 261 39.1
FAN25G3184 Fragaria x ananassa HOM05D006486 ORTHO05D007888 9.5e-23 111.7 257 35.8
MD05G1325600 Malus domestica HOM05D006486 ORTHO05D007888 9.5e-23 111.7 257 36.2
CiPaw.09G157800 Carya illinoinensis HOM05D006486 ORTHO05D007888 1.2e-22 111.3 259 37.1
Cfa000350 Carpinus fangiana HOM05D006486 ORTHO05D007888 1.6e-22 110.9 257 39.3
FAN21G2539 Fragaria x ananassa HOM05D006486 ORTHO05D007888 3.6e-22 109.8 257 35.4
Cc02_g12410 Coffea canephora HOM05D006486 ORTHO05D007888 4.7e-22 109.4 251 39.0
SGA_v2.0_scaffold7G03946 Striga asiatica HOM05D006486 ORTHO05D007888 4.0e-21 106.3 254 34.3
Ca_00252_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 5.2e-21 105.9 252 36.5
Rhsim02G0119500 Rhododendron simsii HOM05D006486 ORTHO05D007888 6.8e-21 105.5 250 36.4
Nn1g03891 Nelumbo nucifera HOM05D006486 ORTHO05D007888 8.9e-21 105.1 247 35.6
Haze_06576 Corylus avellana HOM05D006486 ORTHO05D007888 1.5e-20 104.4 254 37.0
Haze_06575 Corylus avellana HOM05D006486 ORTHO05D007888 2.6e-20 103.6 254 37.0
GSVIVG01003184001 Vitis vinifera HOM05D006486 ORTHO05D007888 1.7e-19 100.9 245 35.1
Cpa.g.sc27.128 Carica papaya HOM05D006486 ORTHO05D007888 2.2e-19 100.5 259 34.7
COL.COLO4_31586 Corchorus olitorius HOM05D006486 ORTHO05D007888 2.2e-19 100.5 248 36.7
Medtr2g011760 Medicago truncatula HOM05D006486 ORTHO05D007888 2.2e-19 100.5 248 36.3
Solyc02g079160.2 Solanum lycopersicum HOM05D006486 ORTHO05D007888 2.2e-19 100.5 251 33.9
MSTRG.7289 Avicennia marina HOM05D006486 ORTHO05D007888 2.9e-19 100.1 254 33.1
FvH4_3g03970 Fragaria vesca HOM05D006486 ORTHO05D007888 4.9e-19 99.4 257 33.1
FAN11G1020 Fragaria x ananassa HOM05D006486 ORTHO05D007888 4.9e-19 99.4 257 33.1
Actinidia24058 Actinidia chinensis HOM05D006486 ORTHO05D007888 8.3e-19 98.6 159 44.7
Phvul.006G192300 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 8.3e-19 98.6 247 35.2
Lj6g0020154 Lotus japonicus HOM05D006486 ORTHO05D007888 1.1e-18 98.2 252 34.5
TWI63G1620 Tripterygium wilfordii HOM05D006486 ORTHO05D007888 1.1e-18 98.2 247 33.6
VMungo0540G0810 Vigna mungo HOM05D006486 ORTHO05D007888 2.4e-18 97.1 247 34.4
Duzib235G1194 Durio zibethinus HOM05D006486 ORTHO05D007888 4.1e-18 96.3 252 36.9
TAR629G2100 Trochodendron aralioides HOM05D006486 ORTHO05D007888 4.1e-18 96.3 248 33.5
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 5.4e-18 95.9 168 42.9
Oeu014709.1 Olea europaea HOM05D006486 ORTHO05D007888 7.0e-18 95.5 252 34.1
Aqoxy1G03879 Aquilegia oxysepala HOM05D006486 ORTHO05D007888 9.2e-18 95.1 254 32.3
Thecc.06G199700 Theobroma cacao HOM05D006486 ORTHO05D007888 9.2e-18 95.1 252 35.7
Medtr4g091220 Medicago truncatula HOM05D006486 ORTHO05D007888 4.6e-17 92.8 277 34.7
TPR.G25690 Trifolium pratense HOM05D006486 ORTHO05D007888 6.0e-17 92.4 278 32.7
Sopen02g023960 Solanum pennellii HOM05D006486 ORTHO05D007888 1.0e-16 91.7 251 33.1
Psat1g208760 Pisum sativum HOM05D006486 ORTHO05D007888 2.3e-16 90.5 243 35.4
Actinidia11810 Actinidia chinensis HOM05D006486 ORTHO05D007888 3.0e-16 90.1 188 39.4
Manes.17G039100 Manihot esculenta HOM05D006486 ORTHO05D007888 3.9e-16 89.7 252 33.3
Lj1P1213T18 Lonicera japonica HOM05D006486 ORTHO05D007888 6.6e-16 89.0 127 46.5
HanXRQChr08g0224091 Helianthus annuus HOM05D006486 ORTHO05D007888 8.6e-16 88.6 338 30.5
Ca_18481_v3 Cicer arietinum L. HOM05D006486 ORTHO05D007888 1.1e-15 88.2 119 47.1
MSTRG.15936 Avicennia marina HOM05D006486 ORTHO05D007888 1.5e-15 87.8 265 33.2
Oeu043421.1 Olea europaea HOM05D006486 ORTHO05D007888 1.9e-15 87.4 155 41.9
Atru.chr10.2014 Acer truncatum HOM05D006486 ORTHO05D007888 2.5e-15 87.0 277 32.9
Peaxi162Scf00083g00023 Petunia axillaris HOM05D006486 ORTHO05D007888 3.3e-15 86.7 254 32.3
Aa31LG6G3500 Aethionema arabicum HOM05D006486 ORTHO05D007888 7.3e-15 85.5 274 31.8
HanXRQChr16g0517421 Helianthus annuus HOM05D006486 ORTHO05D007888 9.5e-15 85.1 286 30.4
SalBow8G4438 Salvia bowleyana HOM05D006486 ORTHO05D007888 9.5e-15 85.1 123 45.5
Ciclev10016271m.g Citrus clementina HOM05D006486 ORTHO05D007888 1.2e-14 84.7 256 33.2
Lsat_1_v5_gn_4_56921 Lactuca sativa HOM05D006486 ORTHO05D007888 1.2e-14 84.7 120 45.0
THA.LOC104812719 Tarenaya hassleriana HOM05D006486 ORTHO05D007888 1.2e-14 84.7 254 32.3
Oeu059548.1 Olea europaea HOM05D006486 ORTHO05D007888 1.6e-14 84.3 240 31.2
Psat7g109320 Pisum sativum HOM05D006486 ORTHO05D007888 2.1e-14 84.0 252 31.7
Nitab4.5_0006573g0010 Nicotiana tabacum HOM05D006486 ORTHO05D007888 3.6e-14 83.2 265 33.2
CSS0009661 Camellia sinensis var. sinensis HOM05D006486 ORTHO05D007888 4.7e-14 82.8 249 32.9
ATR0693G170 Amborella trichopoda HOM05D006486 ORTHO05D007888 1.1e-13 81.6 135 45.2
Gohir.D10G021800 Gossypium hirsutum HOM05D006486 ORTHO05D007888 1.8e-13 80.9 256 31.2
Gorai.011G022900 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.3e-13 80.5 256 31.2
Manes.16G020500 Manihot esculenta HOM05D006486 ORTHO05D007888 4.0e-13 79.7 258 31.8
Nitab4.5_0002222g0020 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.0e-13 79.7 255 31.4
Gohir.A10G021000 Gossypium hirsutum HOM05D006486 ORTHO05D007888 5.2e-13 79.3 256 31.6
Sabra11G0029300 Salix brachista HOM05D006486 ORTHO05D007888 5.2e-13 79.3 276 30.8
Glyma.08G059200 Glycine max HOM05D006486 ORTHO05D007888 6.8e-13 79.0 264 31.8
PGSC0003DMG400022406 Solanum tuberosum HOM05D006486 ORTHO05D007888 6.8e-13 79.0 248 31.9
Potri.011G042600 Populus trichocarpa HOM05D006486 ORTHO05D007888 1.5e-12 77.8 260 32.3
Gohir.D09G070600 Gossypium hirsutum HOM05D006486 ORTHO05D007888 2.6e-12 77.0 124 43.5
Gorai.006G085300 Gossypium raimondii HOM05D006486 ORTHO05D007888 2.6e-12 77.0 124 43.5
Gohir.D06G211933 Gossypium hirsutum HOM05D006486 ORTHO05D007888 3.4e-12 76.6 144 41.7
Nitab4.5_0000190g0060 Nicotiana tabacum HOM05D006486 ORTHO05D007888 4.4e-12 76.3 266 32.0
Potri.004G034200 Populus trichocarpa HOM05D006486 ORTHO05D007888 9.8e-12 75.1 145 40.0
Migut.M01215 Erythranthe guttata HOM05D006486 ORTHO05D007888 1.3e-11 74.7 120 45.8
ECA234G0536 Erigeron canadensis HOM05D006486 ORTHO05D007888 1.7e-11 74.3 142 38.0
Gorai.010G254200 Gossypium raimondii HOM05D006486 ORTHO05D007888 1.7e-11 74.3 144 42.4
AL7G32570 Arabidopsis lyrata HOM05D006486 ORTHO05D007888 2.2e-11 73.9 271 30.3
Sed0019218 Sechium edule HOM05D006486 ORTHO05D007888 3.7e-11 73.2 253 29.2
PSO832G0007 Papaver somniferum HOM05D006486 ORTHO05D007888 8.3e-11 72.0 240 27.9
Carub.0007s1992 Capsella rubella HOM05D006486 ORTHO05D007888 1.9e-10 70.9 276 29.7
Sed0006081 Sechium edule HOM05D006486 ORTHO05D007888 9.2e-10 68.6 117 40.2
PSO210G7027 Papaver somniferum HOM05D006486 ORTHO05D007888 3.5e-09 66.6 240 26.7
AT4G21500 Arabidopsis thaliana HOM05D006486 ORTHO05D007888 4.6e-09 66.2 267 30.3
A01p12810 Brassica napus HOM05D006486 ORTHO05D007888 3.0e-08 63.5 268 30.6
VMungo0251G3177 Vigna mungo HOM05D006486 ORTHO05D007888 3.9e-08 63.2 125 41.6
Phvul.002G221700 Phaseolus vulgaris HOM05D006486 ORTHO05D007888 8.6e-08 62.0 161 36.6
PGR004G0715 Punica granatum HOM05D006486 ORTHO05D007888 1.1e-07 61.6 262 30.2
BolC1t01497H Brassica oleracea HOM05D006486 ORTHO05D007888 2.5e-07 60.5 264 29.2
BcaNung02794 Brassica carinata HOM05D006486 ORTHO05D007888 3.3e-07 60.1 273 28.9
CARHR228160 Cardamine hirsuta HOM05D006486 ORTHO05D007888 3.3e-07 60.1 270 27.8
Oeu030052.1 Olea europaea HOM05D006486 ORTHO05D007888 4.3e-07 59.7 234 27.4
C01p15430 Brassica napus HOM05D006486 ORTHO05D007888 5.6e-07 59.3 264 29.2
HPP92_012357 Vanilla planifolia HOM05D006486 ORTHO05D007888 5.6e-07 59.3 259 27.0
Sc24g0000710 Simmondsia chinensis HOM05D006486 ORTHO05D007888 7.3e-07 58.9 126 38.1
ClCG01G022550 Citrullus lanatus HOM05D006486 ORTHO05D007888 1.6e-06 57.8 254 28.0
CsaV3_6G049740 Cucumis sativus L. HOM05D006486 ORTHO05D007888 1.6e-06 57.8 132 37.1
Oeu051330.1 Olea europaea HOM05D006486 ORTHO05D007888 1.6e-06 57.8 70 52.9
BraA01t01225Z Brassica rapa HOM05D006486 ORTHO05D007888 3.6e-06 56.6 144 30.6
EL10Ac8g20532 Beta vulgaris HOM05D006486 ORTHO05D007888 4.7e-06 56.2 216 25.9


User provided reference genes

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