Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 9.7e-156 553.5 295 100.0
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 5.8e-84 315.1 213 79.8
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 3.1e-45 186.4 205 51.2
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 3.8e-43 179.5 287 41.1
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 5.0e-43 179.1 205 48.8
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 1.1e-42 177.9 288 41.0
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 9.4e-42 174.9 256 41.8
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 3.6e-41 172.9 205 48.3
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 6.1e-41 172.2 290 40.0
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.4e-40 171.0 205 46.3
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 1.8e-40 170.6 280 39.6
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 1.8e-40 170.6 269 41.3
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 3.0e-40 169.9 217 46.5
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 3.0e-40 169.9 205 47.8
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 3.0e-40 169.9 205 45.9
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 3.9e-40 169.5 205 47.3
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 3.9e-40 169.5 205 46.8
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 8.8e-40 168.3 205 45.9
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 1.5e-39 167.5 252 42.5
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 1.5e-39 167.5 287 39.0
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 2.0e-39 167.2 290 40.3
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 4.3e-39 166.0 278 40.6
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 5.7e-39 165.6 284 40.1
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 7.4e-39 165.2 262 40.8
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.3e-38 164.5 226 44.7
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 2.8e-38 163.3 230 43.5
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 2.8e-38 163.3 282 39.7
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 2.8e-38 163.3 295 39.0
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 8.2e-38 161.8 252 41.3
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.4e-37 161.0 227 43.6
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.8e-37 160.6 243 45.3
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 2.4e-37 160.2 208 47.1
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 2.4e-37 160.2 226 43.8
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 4.1e-37 159.5 262 40.1
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 4.1e-37 159.5 286 39.2
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 5.3e-37 159.1 209 45.5
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 6.9e-37 158.7 258 41.5
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 9.1e-37 158.3 209 42.6
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 9.1e-37 158.3 324 36.4
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 1.5e-36 157.5 302 40.4
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 2.0e-36 157.1 208 43.3
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 7.7e-36 155.2 205 45.4
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 1.3e-35 154.5 304 38.8
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 1.3e-35 154.5 219 41.1
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.7e-35 154.1 235 41.3
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 2.2e-35 153.7 262 39.3
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 2.9e-35 153.3 294 39.8
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 3.8e-35 152.9 275 36.7
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 5.0e-35 152.5 281 38.4
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 6.5e-35 152.1 207 43.5
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 8.5e-35 151.8 231 39.8
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 1.4e-34 151.0 195 44.1
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 3.2e-34 149.8 221 42.1
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 4.2e-34 149.4 282 38.3
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 4.2e-34 149.4 255 38.8
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 4.2e-34 149.4 254 39.0
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 5.5e-34 149.1 242 41.3
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 5.5e-34 149.1 265 41.1
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 7.2e-34 148.7 306 37.6
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 9.4e-34 148.3 235 41.7
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 1.2e-33 147.9 248 39.9
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 1.2e-33 147.9 251 41.0
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.6e-33 147.5 205 43.9
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 2.7e-33 146.7 227 40.1
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.7e-33 146.7 292 36.3
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 3.6e-33 146.4 285 37.9
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 4.7e-33 146.0 220 41.8
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 4.7e-33 146.0 262 38.2
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 4.7e-33 146.0 141 56.0
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 6.1e-33 145.6 269 35.7
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 6.1e-33 145.6 290 39.0
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 6.1e-33 145.6 200 45.0
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 6.1e-33 145.6 281 39.9
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 6.1e-33 145.6 141 56.0
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 7.9e-33 145.2 186 42.5
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 7.9e-33 145.2 256 36.7
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 7.9e-33 145.2 207 41.5
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.0e-32 144.8 221 41.2
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 1.8e-32 144.1 144 52.8
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 1.8e-32 144.1 207 40.6
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 1.8e-32 144.1 248 39.5
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 1.8e-32 144.1 261 39.1
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 2.3e-32 143.7 229 40.2
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 2.3e-32 143.7 159 49.7
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 3.9e-32 142.9 205 43.4
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 5.1e-32 142.5 227 40.1
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 6.7e-32 142.1 208 39.9
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 8.8e-32 141.7 266 36.8
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 1.1e-31 141.4 195 42.6
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 1.5e-31 141.0 273 34.8
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.5e-31 141.0 270 34.4
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.5e-31 141.0 216 42.1
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 2.0e-31 140.6 271 34.7
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 3.3e-31 139.8 312 34.0
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 4.4e-31 139.4 264 37.1
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 7.4e-31 138.7 229 39.7
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 7.4e-31 138.7 289 35.3
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 9.7e-31 138.3 233 38.2
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.3e-30 137.9 215 41.4
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 2.2e-30 137.1 191 43.5
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 6.3e-30 135.6 220 37.7
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 6.3e-30 135.6 259 37.1
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 1.8e-29 134.0 303 33.0
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 1.8e-29 134.0 249 36.1
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.4e-29 133.7 253 37.9
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 5.3e-29 132.5 284 33.8
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 5.3e-29 132.5 220 36.8
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 7.0e-29 132.1 284 33.8
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 7.0e-29 132.1 284 33.8
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 7.0e-29 132.1 299 34.4
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 9.1e-29 131.7 254 34.3
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 1.2e-28 131.3 290 35.5
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 1.5e-28 131.0 266 33.1
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 2.0e-28 130.6 250 36.0
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.6e-28 130.2 218 39.4
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.6e-28 130.2 218 39.4
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 3.5e-28 129.8 245 36.3
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 4.5e-28 129.4 253 33.2
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 7.7e-28 128.6 263 35.0
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 7.7e-28 128.6 171 42.1
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 1.3e-27 127.9 269 33.1
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 1.3e-27 127.9 244 36.5
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 1.7e-27 127.5 227 38.3
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 5.0e-27 125.9 227 37.9
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 9.4e-26 121.7 209 37.3
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 2.1e-25 120.6 283 33.6
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 4.4e-23 112.8 207 37.2
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 4.4e-23 112.8 235 34.9
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 7.4e-23 112.1 204 35.3
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 2.2e-22 110.5 198 36.9
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 2.8e-22 110.2 196 37.2
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 8.2e-22 108.6 138 43.5
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 1.8e-21 107.5 115 46.1
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 1.6e-20 104.4 192 37.0
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 1.3e-19 101.3 229 34.1
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 1.5e-15 87.8 210 32.4
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 3.4e-15 86.7 136 38.2
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 2.0e-12 77.4 182 34.6
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 2.7e-12 77.0 107 42.1
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 3.2e-10 70.1 122 37.7
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 3.2e-10 70.1 189 29.6
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 4.2e-10 69.7 64 53.1
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 1.2e-09 68.2 105 32.4
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 4.7e-09 66.2 223 29.1
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 4.7e-09 66.2 223 29.1
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 4.0e-08 63.2 125 35.2
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 5.2e-08 62.8 63 50.8
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 4.8e-06 56.2 134 27.6
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 8.3e-06 55.5 119 28.6


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