Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2589 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 0.0e+00 1690.2 877 100.0
CDE05G0998 Ceratophyllum demersum HOM05D005351 ORTHO05D006542 1.7e-272 943.0 899 62.6
Nn1g02046 Nelumbo nucifera HOM05D005351 ORTHO05D006542 8.2e-102 375.9 1032 35.3
TAR626G0279 Trochodendron aralioides HOM05D005351 ORTHO05D006542 1.4e-101 375.2 1032 33.9
Haze_09867 Corylus avellana HOM05D005351 ORTHO05D006542 1.7e-99 368.2 998 36.1
Cfa021891 Carpinus fangiana HOM05D005351 ORTHO05D006542 1.8e-96 358.2 1003 34.9
MD11G1037100 Malus domestica HOM05D005351 ORTHO05D006542 1.5e-95 355.1 989 33.9
Duzib213G0009 Durio zibethinus HOM05D005351 ORTHO05D006542 4.8e-94 350.1 980 33.8
Gohir.D05G384000 Gossypium hirsutum HOM05D005351 ORTHO05D006542 4.8e-94 350.1 968 33.4
Gorai.009G450800 Gossypium raimondii HOM05D005351 ORTHO05D006542 8.2e-94 349.4 965 33.9
FAN25G1298 Fragaria x ananassa HOM05D005351 ORTHO05D006542 3.1e-93 347.4 960 34.8
Thecc.07G007900 Theobroma cacao HOM05D005351 ORTHO05D006542 9.1e-93 345.9 1004 33.7
TWI38G2212 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 7.7e-92 342.8 1047 32.5
Sabra16G0244200 Salix brachista HOM05D005351 ORTHO05D006542 1.3e-91 342.0 1016 34.4
FAN21G2745 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.7e-91 341.7 965 34.4
FAN11G1247 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.1e-90 339.0 961 34.2
PSO210G4843 Papaver somniferum HOM05D005351 ORTHO05D006542 1.1e-90 339.0 952 35.2
PSO210G4950 Papaver somniferum HOM05D005351 ORTHO05D006542 2.5e-90 337.8 965 35.2
Gohir.A04G005700 Gossypium hirsutum HOM05D005351 ORTHO05D006542 9.4e-90 335.9 965 33.4
FAN16G2746 Fragaria x ananassa HOM05D005351 ORTHO05D006542 1.6e-89 335.1 969 34.1
CSS0029070 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 1.4e-88 332.0 1011 33.1
CSS0045517 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 5.2e-88 330.1 1010 32.7
SalBow8G3039 Salvia bowleyana HOM05D005351 ORTHO05D006542 3.4e-87 327.4 973 32.6
CsaV3_7G023840 Cucumis sativus L. HOM05D005351 ORTHO05D006542 4.4e-87 327.0 978 33.2
Lj6g0009098 Lotus japonicus HOM05D005351 ORTHO05D006542 5.7e-87 326.6 978 33.9
Sed0019267 Sechium edule HOM05D005351 ORTHO05D006542 9.8e-87 325.9 979 33.9
TWI38G1324 Tripterygium wilfordii HOM05D005351 ORTHO05D006542 1.7e-86 325.1 991 32.3
VMungo0540G1402 Vigna mungo HOM05D005351 ORTHO05D006542 3.7e-86 323.9 976 31.5
Medtr3g461030 Medicago truncatula HOM05D005351 ORTHO05D006542 4.8e-86 323.6 986 33.3
COL.COLO4_07741 Corchorus olitorius HOM05D005351 ORTHO05D006542 1.4e-85 322.0 969 34.4
Phvul.006G059260 Phaseolus vulgaris HOM05D005351 ORTHO05D006542 5.4e-85 320.1 989 30.9
Nitab4.5_0005478g0030 Nicotiana tabacum HOM05D005351 ORTHO05D006542 4.5e-84 317.0 981 33.4
MSTRG.15808 Avicennia marina HOM05D005351 ORTHO05D006542 1.0e-83 315.8 1000 32.7
PGSC0003DMG400014404 Solanum tuberosum HOM05D005351 ORTHO05D006542 1.7e-83 315.1 982 32.7
GSVIVG01014743001 Vitis vinifera HOM05D005351 ORTHO05D006542 1.9e-82 311.6 935 31.3
Cc05_g15290 Coffea canephora HOM05D005351 ORTHO05D006542 3.2e-82 310.8 996 33.2
HanXRQChr11g0334131 Helianthus annuus HOM05D005351 ORTHO05D006542 4.2e-82 310.5 931 34.4
MBI14_g37362_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 7.2e-82 309.7 975 32.1
ATR0751G017 Amborella trichopoda HOM05D005351 ORTHO05D006542 1.2e-81 308.9 1044 32.0
MD03G1035400 Malus domestica HOM05D005351 ORTHO05D006542 1.2e-81 308.9 914 32.7
CAN.G492.50 Capsicum annuum HOM05D005351 ORTHO05D006542 2.7e-81 307.8 986 33.0
Nitab4.5_0003328g0090 Nicotiana tabacum HOM05D005351 ORTHO05D006542 2.7e-81 307.8 996 32.3
Manes.01G003500 Manihot esculenta HOM05D005351 ORTHO05D006542 8.0e-81 306.2 1010 32.2
Ca_12455_v3 Cicer arietinum L. HOM05D005351 ORTHO05D006542 1.0e-80 305.8 962 31.7
Prupe.6G028400 Prunus persica HOM05D005351 ORTHO05D006542 1.0e-80 305.8 922 32.3
RcHm_v2.0_Chr5g0075571 Rosa chinensis HOM05D005351 ORTHO05D006542 3.0e-80 304.3 906 31.6
DCAR_013254 Daucus carota HOM05D005351 ORTHO05D006542 2.6e-79 301.2 981 32.8
PGR083G0334 Punica granatum HOM05D005351 ORTHO05D006542 3.4e-79 300.8 1012 31.5
Nn3g19476 Nelumbo nucifera HOM05D005351 ORTHO05D006542 4.4e-79 300.4 980 32.0
Actinidia03651 Actinidia chinensis HOM05D005351 ORTHO05D006542 5.7e-79 300.1 960 32.3
AUR62017130 Chenopodium quinoa HOM05D005351 ORTHO05D006542 7.5e-79 299.7 1007 32.4
Dinv40885 Davidia involucrata HOM05D005351 ORTHO05D006542 1.3e-78 298.9 976 31.9
THA.LOC104815687 Tarenaya hassleriana HOM05D005351 ORTHO05D006542 1.8e-77 295.0 962 32.0
TPR.G17956 Trifolium pratense HOM05D005351 ORTHO05D006542 3.1e-77 294.3 964 32.6
Hund23091 Selenicereus undatus HOM05D005351 ORTHO05D006542 2.0e-76 291.6 984 32.0
AUR62035679 Chenopodium quinoa HOM05D005351 ORTHO05D006542 5.9e-76 290.0 998 31.8
unitig_0.g707 Utricularia gibba HOM05D005351 ORTHO05D006542 5.9e-76 290.0 950 32.3
Lalb_Chr15g0082311 Lupinus albus HOM05D005351 ORTHO05D006542 1.0e-75 289.3 977 31.1
Cpa.g.sc12.108 Carica papaya HOM05D005351 ORTHO05D006542 3.8e-75 287.3 933 30.4
Oeu049420.1 Olea europaea HOM05D005351 ORTHO05D006542 5.0e-75 287.0 993 31.1
Migut.M01635 Erythranthe guttata HOM05D005351 ORTHO05D006542 1.9e-74 285.0 942 31.8
CiPaw.12G140700 Carya illinoinensis HOM05D005351 ORTHO05D006542 2.1e-73 281.6 796 33.4
Psat5g166400 Pisum sativum HOM05D005351 ORTHO05D006542 2.8e-73 281.2 1011 30.6
Lj8A180G96 Lonicera japonica HOM05D005351 ORTHO05D006542 2.3e-72 278.1 963 31.5
Carub.0003s1261 Capsella rubella HOM05D005351 ORTHO05D006542 5.2e-72 276.9 946 32.3
Potri.001G371600 Populus trichocarpa HOM05D005351 ORTHO05D006542 1.5e-71 275.4 829 33.9
AT3G13225 Arabidopsis thaliana HOM05D005351 ORTHO05D006542 2.2e-70 271.6 971 29.9
Os06g0298400 Oryza sativa ssp. japonica HOM05D005351 ORTHO05D006542 1.2e-68 265.8 946 30.5
vmacro09623 Vaccinium macrocarpon HOM05D005351 ORTHO05D006542 1.7e-67 261.9 977 30.9
HPP92_017874 Vanilla planifolia HOM05D005351 ORTHO05D006542 5.0e-67 260.4 916 32.0
FvH4_3g42241 Fragaria vesca HOM05D005351 ORTHO05D006542 6.6e-67 260.0 889 32.3
Ah.06g181500 Amaranthus hybridus HOM05D005351 ORTHO05D006542 8.6e-67 259.6 1039 29.7
Sp3g11430 Schrenkiella parvula HOM05D005351 ORTHO05D006542 8.6e-67 259.6 971 29.6
Aqoxy1G04296 Aquilegia oxysepala HOM05D005351 ORTHO05D006542 5.6e-66 256.9 999 30.1
SEGI_31992 Sequoiadendron giganteum HOM05D005351 ORTHO05D006542 1.2e-65 255.8 1088 30.2
Rhsim04G0010500 Rhododendron simsii HOM05D005351 ORTHO05D006542 3.6e-65 254.2 1109 29.1
Solyc10g005850.4 Solanum lycopersicum HOM05D005351 ORTHO05D006542 1.0e-64 252.7 898 30.8
BcaB04g21006 Brassica carinata HOM05D005351 ORTHO05D006542 1.4e-64 252.3 951 29.3
QL08p002685 Quercus lobata HOM05D005351 ORTHO05D006542 3.1e-64 251.1 960 29.7
BcaC09g48295 Brassica carinata HOM05D005351 ORTHO05D006542 4.0e-64 250.8 953 30.6
ECA236G3149 Erigeron canadensis HOM05D005351 ORTHO05D006542 5.2e-64 250.4 941 30.6
SGA_v2.0_scaffold168G38576 Striga asiatica HOM05D005351 ORTHO05D006542 1.2e-63 249.2 822 31.4
Zm00001eb381020 Zea mays HOM05D005351 ORTHO05D006542 2.6e-63 248.1 931 30.8
Sopen10g001810 Solanum pennellii HOM05D005351 ORTHO05D006542 5.8e-63 246.9 916 30.5
BolC1t05130H Brassica oleracea HOM05D005351 ORTHO05D006542 2.9e-62 244.6 960 30.5
Glyma.08G332700 Glycine max HOM05D005351 ORTHO05D006542 2.9e-62 244.6 836 29.8
Glyma.18G074300 Glycine max HOM05D005351 ORTHO05D006542 1.9e-61 241.9 807 31.6
EL10Ac4g07541 Beta vulgaris HOM05D005351 ORTHO05D006542 2.4e-61 241.5 1051 29.6
BraA01t04066Z Brassica rapa HOM05D005351 ORTHO05D006542 7.0e-61 240.0 982 29.5
CANSAT11G0508 Cannabis sativa HOM05D005351 ORTHO05D006542 6.0e-60 236.9 808 32.2
arahy.Tifrunner.gnm1.ann1.1R5J8M Arachis hypogaea HOM05D005351 ORTHO05D006542 3.0e-59 234.6 939 30.9
ClCG09G021540 Citrullus lanatus HOM05D005351 ORTHO05D006542 1.2e-57 229.2 1017 28.6
Ciclev10007493m.g Citrus clementina HOM05D005351 ORTHO05D006542 4.4e-55 220.7 826 31.6
Thhalv10020110m.g Eutrema salsugineum HOM05D005351 ORTHO05D006542 1.3e-54 219.2 770 31.7
Eucgr.F02026 Eucalyptus grandis HOM05D005351 ORTHO05D006542 2.2e-54 218.4 806 30.0
Aa31LG8G460 Aethionema arabicum HOM05D005351 ORTHO05D006542 2.9e-54 218.0 995 29.9
Peaxi162Scf00018g00155 Petunia axillaris HOM05D005351 ORTHO05D006542 8.3e-54 216.5 895 30.4
arahy.Tifrunner.gnm1.ann1.LDHF9L Arachis hypogaea HOM05D005351 ORTHO05D006542 5.4e-53 213.8 937 29.8
CARHR087840 Cardamine hirsuta HOM05D005351 ORTHO05D006542 5.4e-53 213.8 768 31.4
Dinv10362 Davidia involucrata HOM05D005351 ORTHO05D006542 1.0e-51 209.5 864 31.4
AL3G25030 Arabidopsis lyrata HOM05D005351 ORTHO05D006542 3.0e-51 208.0 794 28.3
Lsat_1_v5_gn_7_114900 Lactuca sativa HOM05D005351 ORTHO05D006542 7.3e-50 203.4 993 28.3
A01p40300 Brassica napus HOM05D005351 ORTHO05D006542 9.5e-50 203.0 906 28.5
MELO3C024969.2 Cucumis melo HOM05D005351 ORTHO05D006542 3.1e-48 198.0 941 29.0
Zm00001eb281160 Zea mays HOM05D005351 ORTHO05D006542 2.0e-47 195.3 905 30.5
C01p51820 Brassica napus HOM05D005351 ORTHO05D006542 4.4e-47 194.1 885 28.0
Sc03g0011530 Simmondsia chinensis HOM05D005351 ORTHO05D006542 4.6e-44 184.1 596 32.9
Atru.chr2.3836 Acer truncatum HOM05D005351 ORTHO05D006542 6.0e-44 183.7 738 29.4
PSO782G2183 Papaver somniferum HOM05D005351 ORTHO05D006542 2.3e-35 155.2 126 66.7
Hma1.2p1_0193F.1_g083920 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 3.0e-35 154.8 1048 26.3
MBI14_g27041_MAGBIO Magnolia biondii HOM05D005351 ORTHO05D006542 2.5e-34 151.8 134 64.9
Oeu017994.1 Olea europaea HOM05D005351 ORTHO05D006542 1.1e-29 136.3 136 56.6
AagrBONN_evm.TU.Sc2ySwM_368.1722__1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 4.5e-23 114.4 1075 23.7
CBR_g12012 Chara braunii HOM05D005351 ORTHO05D006542 1.7e-22 112.5 202 40.1
CSS0030315 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 8.4e-22 110.2 389 27.8
SMO164G0196 Selaginella moellendorffii HOM05D005351 ORTHO05D006542 1.9e-21 109.0 149 46.3
CSS0028997 Camellia sinensis var. sinensis HOM05D005351 ORTHO05D006542 2.7e-20 105.1 381 27.8
HPP92_028497 Vanilla planifolia HOM05D005351 ORTHO05D006542 1.3e-19 102.8 151 45.0
Pp3c7_8580 Physcomitrium patens HOM05D005351 ORTHO05D006542 2.8e-17 95.1 977 23.5
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 2.0e-15 89.0 94 57.4
Dinv10361 Davidia involucrata HOM05D005351 ORTHO05D006542 1.3e-14 86.3 73 56.2
Actinidia00844 Actinidia chinensis HOM05D005351 ORTHO05D006542 6.5e-14 84.0 354 28.0
Hma1.2p1_3473F.1_g336230 Hydrangea macrophylla HOM05D005351 ORTHO05D006542 6.5e-14 84.0 82 59.8
PSO782G1978 Papaver somniferum HOM05D005351 ORTHO05D006542 2.1e-12 79.0 365 28.8
Lsat_1_v5_gn_6_88041 Lactuca sativa HOM05D005351 ORTHO05D006542 6.0e-12 77.4 207 32.9
CiPaw.12G140800 Carya illinoinensis HOM05D005351 ORTHO05D006542 1.4e-08 66.2 144 41.0
Solyc10g005860.3 Solanum lycopersicum HOM05D005351 ORTHO05D006542 5.3e-08 64.3 60 58.3
Peaxi162Scf00018g00154 Petunia axillaris HOM05D005351 ORTHO05D006542 4.5e-07 61.2 60 58.3
Cre09.g388430 Chlamydomonas reinhardtii HOM05D005351 ORTHO05D006542 7.6e-07 60.5 193 28.5
AagrBONN_evm.TU.Sc2ySwM_368.1723 Anthoceros agrestis HOM05D005351 ORTHO05D006542 1.3e-06 59.7 120 40.8


User provided reference genes

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