Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2574 Ceratophyllum demersum HOM05D005031 ORTHO05D006098 1.1e-90 336.7 174 100.0
Nn8g40193 Nelumbo nucifera HOM05D005031 ORTHO05D006098 5.3e-69 264.6 174 75.3
TWI73G0469 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 8.5e-67 257.3 174 73.0
arahy.Tifrunner.gnm1.ann1.QFVN2V Arachis hypogaea HOM05D005031 ORTHO05D006098 4.2e-66 255.0 174 73.6
Gohir.D08G098400 Gossypium hirsutum HOM05D005031 ORTHO05D006098 5.5e-66 254.6 174 72.4
Gorai.004G106100 Gossypium raimondii HOM05D005031 ORTHO05D006098 7.2e-66 254.2 174 72.4
CsaV3_2G007780 Cucumis sativus L. HOM05D005031 ORTHO05D006098 9.3e-66 253.8 174 74.1
PGR031G2537 Punica granatum HOM05D005031 ORTHO05D006098 9.3e-66 253.8 174 72.4
GSVIVG01033204001 Vitis vinifera HOM05D005031 ORTHO05D006098 9.3e-66 253.8 174 74.1
Thecc.09G157500 Theobroma cacao HOM05D005031 ORTHO05D006098 1.2e-65 253.4 174 73.0
Gohir.A08G087500 Gossypium hirsutum HOM05D005031 ORTHO05D006098 3.6e-65 251.9 174 71.3
Duzib168G1565 Durio zibethinus HOM05D005031 ORTHO05D006098 6.1e-65 251.1 174 72.4
VMungo1215G0734 Vigna mungo HOM05D005031 ORTHO05D006098 6.1e-65 251.1 174 71.3
Prupe.1G100400 Prunus persica HOM05D005031 ORTHO05D006098 7.9e-65 250.8 174 71.8
Potri.018G101100 Populus trichocarpa HOM05D005031 ORTHO05D006098 1.0e-64 250.4 174 71.3
Glyma.02G207700 Glycine max HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 71.3
Lj6g0018969 Lotus japonicus HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 71.3
Phvul.003G152700 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 1.8e-64 249.6 174 70.7
Duzib187G1655 Durio zibethinus HOM05D005031 ORTHO05D006098 3.0e-64 248.8 174 71.8
Phvul.010G125500 Phaseolus vulgaris HOM05D005031 ORTHO05D006098 3.9e-64 248.4 174 70.1
RcHm_v2.0_Chr4g0405231 Rosa chinensis HOM05D005031 ORTHO05D006098 3.9e-64 248.4 174 71.8
Glyma.17G070000 Glycine max HOM05D005031 ORTHO05D006098 5.1e-64 248.1 174 70.7
PSO017G4787 Papaver somniferum HOM05D005031 ORTHO05D006098 5.1e-64 248.1 174 69.0
Hma1.2p1_2290F.1_g319050 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 6.7e-64 247.7 174 70.7
Ciclev10012924m.g Citrus clementina HOM05D005031 ORTHO05D006098 8.7e-64 247.3 174 70.7
Duzib187G0728 Durio zibethinus HOM05D005031 ORTHO05D006098 8.7e-64 247.3 174 71.3
Medtr4g130180 Medicago truncatula HOM05D005031 ORTHO05D006098 2.5e-63 245.7 174 69.5
Sed0023985 Sechium edule HOM05D005031 ORTHO05D006098 2.5e-63 245.7 174 71.3
FvH4_3g25860 Fragaria vesca HOM05D005031 ORTHO05D006098 4.3e-63 245.0 174 70.1
FAN11G2096 Fragaria x ananassa HOM05D005031 ORTHO05D006098 4.3e-63 245.0 174 70.1
FAN21G1649 Fragaria x ananassa HOM05D005031 ORTHO05D006098 4.3e-63 245.0 174 70.7
RcHm_v2.0_Chr5g0047191 Rosa chinensis HOM05D005031 ORTHO05D006098 4.3e-63 245.0 174 70.7
Hund18050 Selenicereus undatus HOM05D005031 ORTHO05D006098 4.3e-63 245.0 174 70.1
PSO478G0084 Papaver somniferum HOM05D005031 ORTHO05D006098 7.4e-63 244.2 174 68.4
EL10Ac7g17961 Beta vulgaris HOM05D005031 ORTHO05D006098 9.7e-63 243.8 174 69.0
Ca_21160_v3 Cicer arietinum L. HOM05D005031 ORTHO05D006098 2.2e-62 242.7 174 68.4
MD00G1059200 Malus domestica HOM05D005031 ORTHO05D006098 2.2e-62 242.7 174 69.5
TPR.G1244 Trifolium pratense HOM05D005031 ORTHO05D006098 2.8e-62 242.3 174 67.8
ATR0580G158 Amborella trichopoda HOM05D005031 ORTHO05D006098 3.7e-62 241.9 174 69.0
Eucgr.H00166 Eucalyptus grandis HOM05D005031 ORTHO05D006098 3.7e-62 241.9 174 69.5
Lalb_Chr07g0180011 Lupinus albus HOM05D005031 ORTHO05D006098 3.7e-62 241.9 175 69.7
FAN25G2017 Fragaria x ananassa HOM05D005031 ORTHO05D006098 4.8e-62 241.5 174 70.1
Sp7g28380 Schrenkiella parvula HOM05D005031 ORTHO05D006098 4.8e-62 241.5 174 67.2
Hma1.2p1_1493F.1_g286836 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 6.3e-62 241.1 174 69.5
AL4G13970 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 8.2e-62 240.7 174 69.0
Thhalv10026393m.g Eutrema salsugineum HOM05D005031 ORTHO05D006098 1.1e-61 240.4 174 66.7
Manes.06G033000 Manihot esculenta HOM05D005031 ORTHO05D006098 1.1e-61 240.4 174 70.7
C01p08550 Brassica napus HOM05D005031 ORTHO05D006098 2.4e-61 239.2 174 65.5
Carub.0004s0310 Capsella rubella HOM05D005031 ORTHO05D006098 2.4e-61 239.2 174 68.4
MELO3C004109.2 Cucumis melo HOM05D005031 ORTHO05D006098 2.4e-61 239.2 174 70.1
CANSAT11G2524 Cannabis sativa HOM05D005031 ORTHO05D006098 3.1e-61 238.8 174 67.8
CAN.G1190.6 Capsicum annuum HOM05D005031 ORTHO05D006098 4.1e-61 238.4 174 68.4
MD00G1091200 Malus domestica HOM05D005031 ORTHO05D006098 4.1e-61 238.4 174 67.8
AT2G23940 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 5.3e-61 238.0 174 67.2
BcaNung00560 Brassica carinata HOM05D005031 ORTHO05D006098 5.3e-61 238.0 174 64.9
BcaNung00561 Brassica carinata HOM05D005031 ORTHO05D006098 5.3e-61 238.0 174 64.9
C07p57970 Brassica napus HOM05D005031 ORTHO05D006098 5.3e-61 238.0 174 64.9
BolC7t46255H Brassica oleracea HOM05D005031 ORTHO05D006098 5.3e-61 238.0 174 64.9
HPP92_025776 Vanilla planifolia HOM05D005031 ORTHO05D006098 5.3e-61 238.0 174 68.4
A03p59910 Brassica napus HOM05D005031 ORTHO05D006098 6.9e-61 237.7 174 64.9
THA.LOC104819960 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 6.9e-61 237.7 174 67.8
Aa31LG2G20010 Aethionema arabicum HOM05D005031 ORTHO05D006098 9.1e-61 237.3 174 68.4
COL.COLO4_10074 Corchorus olitorius HOM05D005031 ORTHO05D006098 9.1e-61 237.3 174 68.4
THA.LOC104803530 Tarenaya hassleriana HOM05D005031 ORTHO05D006098 1.2e-60 236.9 174 67.2
BraA03t15048Z Brassica rapa HOM05D005031 ORTHO05D006098 1.5e-60 236.5 174 64.4
AL7G21640 Arabidopsis lyrata HOM05D005031 ORTHO05D006098 2.0e-60 236.1 174 66.1
arahy.Tifrunner.gnm1.ann1.0TL0BP Arachis hypogaea HOM05D005031 ORTHO05D006098 2.6e-60 235.7 198 63.6
PSO675G4517 Papaver somniferum HOM05D005031 ORTHO05D006098 2.6e-60 235.7 174 65.5
Sabra18G0087000 Salix brachista HOM05D005031 ORTHO05D006098 3.4e-60 235.3 194 62.9
BcaC09g51840 Brassica carinata HOM05D005031 ORTHO05D006098 7.7e-60 234.2 174 64.4
Oeu045637.1 Olea europaea HOM05D005031 ORTHO05D006098 1.3e-59 233.4 174 66.7
TAR636G0261 Trochodendron aralioides HOM05D005031 ORTHO05D006098 1.3e-59 233.4 171 67.3
A01p07680 Brassica napus HOM05D005031 ORTHO05D006098 2.2e-59 232.6 174 63.2
BolC1t00837H Brassica oleracea HOM05D005031 ORTHO05D006098 2.9e-59 232.3 167 65.9
BraA01t00711Z Brassica rapa HOM05D005031 ORTHO05D006098 2.9e-59 232.3 173 63.0
ClCG11G012690 Citrullus lanatus HOM05D005031 ORTHO05D006098 5.0e-59 231.5 174 67.2
BolC1t00831H Brassica oleracea HOM05D005031 ORTHO05D006098 1.1e-58 230.3 167 65.3
Lj4g0007960 Lotus japonicus HOM05D005031 ORTHO05D006098 1.1e-58 230.3 175 65.1
Oeu031856.2 Olea europaea HOM05D005031 ORTHO05D006098 3.2e-58 228.8 174 63.8
TWI23G1034 Tripterygium wilfordii HOM05D005031 ORTHO05D006098 3.2e-58 228.8 158 70.3
CARHR184610 Cardamine hirsuta HOM05D005031 ORTHO05D006098 4.2e-58 228.4 167 67.1
CiPaw.06G050600 Carya illinoinensis HOM05D005031 ORTHO05D006098 9.4e-58 227.3 174 64.9
Peaxi162Scf00038g00324 Petunia axillaris HOM05D005031 ORTHO05D006098 3.6e-57 225.3 174 66.1
AT4G30500 Arabidopsis thaliana HOM05D005031 ORTHO05D006098 1.4e-56 223.4 174 63.2
Hma1.2p1_2438F.1_g322190 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.4e-56 223.4 156 70.5
QL01p011713 Quercus lobata HOM05D005031 ORTHO05D006098 1.4e-56 223.4 143 75.5
Aqoxy5G00990 Aquilegia oxysepala HOM05D005031 ORTHO05D006098 2.0e-55 219.5 171 64.3
Atru.chr12.1707 Acer truncatum HOM05D005031 ORTHO05D006098 5.7e-55 218.0 174 64.4
MBI14_g16418_MAGBIO Magnolia biondii HOM05D005031 ORTHO05D006098 7.4e-55 217.6 146 73.3
ECA234G3840 Erigeron canadensis HOM05D005031 ORTHO05D006098 2.2e-54 216.1 174 62.1
Zm00001eb186920 Zea mays HOM05D005031 ORTHO05D006098 3.7e-54 215.3 175 65.1
SalBow1G8617 Salvia bowleyana HOM05D005031 ORTHO05D006098 1.1e-53 213.8 174 62.6
Solyc07g006150.3 Solanum lycopersicum HOM05D005031 ORTHO05D006098 1.4e-53 213.4 174 62.1
Sopen07g002260 Solanum pennellii HOM05D005031 ORTHO05D006098 1.4e-53 213.4 174 62.1
PGSC0003DMG400011218 Solanum tuberosum HOM05D005031 ORTHO05D006098 1.4e-53 213.4 174 61.5
Atru.chr12.1715 Acer truncatum HOM05D005031 ORTHO05D006098 1.8e-53 213.0 143 70.6
Nitab4.5_0001036g0100 Nicotiana tabacum HOM05D005031 ORTHO05D006098 2.4e-53 212.6 174 62.6
HanXRQChr10g0307831 Helianthus annuus HOM05D005031 ORTHO05D006098 3.1e-53 212.2 174 63.2
BolC1t00834H Brassica oleracea HOM05D005031 ORTHO05D006098 1.5e-52 209.9 151 64.2
Nitab4.5_0002545g0040 Nicotiana tabacum HOM05D005031 ORTHO05D006098 2.0e-52 209.5 174 61.5
vmacro01000 Vaccinium macrocarpon HOM05D005031 ORTHO05D006098 7.7e-52 207.6 174 60.3
SGA_v2.0_scaffold12G06032 Striga asiatica HOM05D005031 ORTHO05D006098 1.7e-51 206.5 174 61.5
Actinidia38656 Actinidia chinensis HOM05D005031 ORTHO05D006098 3.8e-51 205.3 174 59.2
Sed0023066 Sechium edule HOM05D005031 ORTHO05D006098 8.5e-51 204.1 155 69.0
Migut.K00291 Erythranthe guttata HOM05D005031 ORTHO05D006098 1.1e-50 203.8 174 58.0
Actinidia33308 Actinidia chinensis HOM05D005031 ORTHO05D006098 9.4e-50 200.7 174 59.8
Dinv41325 Davidia involucrata HOM05D005031 ORTHO05D006098 3.6e-49 198.7 174 58.0
Sc05g0001840 Simmondsia chinensis HOM05D005031 ORTHO05D006098 4.7e-49 198.4 122 74.6
Hma1.2p1_2725F.1_g327560 Hydrangea macrophylla HOM05D005031 ORTHO05D006098 1.0e-48 197.2 122 75.4
Cc06_g14310 Coffea canephora HOM05D005031 ORTHO05D006098 6.7e-48 194.5 174 59.2
Psat0s2826g0160 Pisum sativum HOM05D005031 ORTHO05D006098 4.4e-47 191.8 122 72.1
Lsat_1_v5_gn_5_88201 Lactuca sativa HOM05D005031 ORTHO05D006098 1.3e-46 190.3 176 57.4
CSS0024126 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 1.7e-46 189.9 172 57.6
CSS0012616 Camellia sinensis var. sinensis HOM05D005031 ORTHO05D006098 2.2e-46 189.5 172 57.6
MSTRG.10716 Avicennia marina HOM05D005031 ORTHO05D006098 8.2e-46 187.6 174 56.9
Rhsim03G0261100 Rhododendron simsii HOM05D005031 ORTHO05D006098 4.1e-45 185.3 196 51.5
AagrBONN_evm.TU.Sc2ySwM_368.3216 Anthoceros agrestis HOM05D005031 ORTHO05D006098 1.6e-44 183.3 171 53.2
Mapoly0003s0226 Marchantia polymorpha HOM05D005031 ORTHO05D006098 5.9e-44 181.4 172 54.1
Os02g0666800 Oryza sativa ssp. japonica HOM05D005031 ORTHO05D006098 6.5e-43 177.9 175 55.4
Rhsim03G0260600 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.4e-40 170.2 239 42.3
SMO164G0234 Selaginella moellendorffii HOM05D005031 ORTHO05D006098 1.8e-40 169.9 179 50.8
AUR62001168 Chenopodium quinoa HOM05D005031 ORTHO05D006098 2.0e-39 166.4 182 52.2
Pp3c11_17250 Physcomitrium patens HOM05D005031 ORTHO05D006098 1.8e-37 159.8 173 49.1
CBR_g3690 Chara braunii HOM05D005031 ORTHO05D006098 4.5e-36 155.2 176 44.9
Ah.08g218880 Amaranthus hybridus HOM05D005031 ORTHO05D006098 1.7e-35 153.3 94 73.4
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 1.5e-34 150.2 94 71.3
Haze_21256 Corylus avellana HOM05D005031 ORTHO05D006098 1.5e-34 150.2 95 71.6
Cpa.g.sc743.3 Carica papaya HOM05D005031 ORTHO05D006098 4.4e-31 138.7 93 66.7
BcaNung01743 Brassica carinata HOM05D005031 ORTHO05D006098 7.2e-26 121.3 82 63.4
BcaB08g34788 Brassica carinata HOM05D005031 ORTHO05D006098 1.0e-24 117.5 127 51.2
CARHR238390 Cardamine hirsuta HOM05D005031 ORTHO05D006098 7.5e-23 111.3 96 52.1
Cre02.g096850 Chlamydomonas reinhardtii HOM05D005031 ORTHO05D006098 9.8e-23 110.9 172 39.0
BcaB04g19089 Brassica carinata HOM05D005031 ORTHO05D006098 2.2e-22 109.8 119 47.9
Lj7A465G52 Lonicera japonica HOM05D005031 ORTHO05D006098 2.0e-20 103.2 67 68.7
MELO3C020438.2 Cucumis melo HOM05D005031 ORTHO05D006098 3.5e-20 102.4 55 81.8
MELO3C010414.2 Cucumis melo HOM05D005031 ORTHO05D006098 5.6e-18 95.1 53 79.2
MELO3C032992.2 Cucumis melo HOM05D005031 ORTHO05D006098 4.0e-16 89.0 48 81.2
MCO15G043 Micromonas commoda HOM05D005031 ORTHO05D006098 1.3e-14 84.0 173 32.9
unitig_62.g23488 Utricularia gibba HOM05D005031 ORTHO05D006098 4.9e-14 82.0 85 52.9
MELO3C033057.2 Cucumis melo HOM05D005031 ORTHO05D006098 1.6e-12 77.0 38 84.2
PRCOL_00004780 Prasinoderma coloniale HOM05D005031 ORTHO05D006098 2.7e-12 76.3 176 29.0
Rhsim03G0261000 Rhododendron simsii HOM05D005031 ORTHO05D006098 1.2e-07 60.8 93 40.9
CARHR184590 Cardamine hirsuta HOM05D005031 ORTHO05D006098 3.7e-06 55.8 50 56.0


User provided reference genes

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