Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2538 Ceratophyllum demersum HOM05D005603 ORTHO05D006944 3.4e-244 847.8 402 100.0
QL06p033966 Quercus lobata HOM05D005603 ORTHO05D006944 7.4e-215 750.4 400 88.2
Aqoxy5G01490 Aquilegia oxysepala HOM05D005603 ORTHO05D006944 1.6e-214 749.2 401 87.3
TAR376G0194 Trochodendron aralioides HOM05D005603 ORTHO05D006944 2.1e-214 748.8 402 87.8
Sc03g0003440 Simmondsia chinensis HOM05D005603 ORTHO05D006944 3.6e-214 748.0 401 86.5
TAR628G0819 Trochodendron aralioides HOM05D005603 ORTHO05D006944 6.2e-214 747.3 401 87.0
CSS0040106 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 2.4e-213 745.3 403 87.3
Prupe.7G165200 Prunus persica HOM05D005603 ORTHO05D006944 4.0e-213 744.6 402 86.6
Nn5g29214 Nelumbo nucifera HOM05D005603 ORTHO05D006944 5.3e-213 744.2 402 86.8
ATR0620G128 Amborella trichopoda HOM05D005603 ORTHO05D006944 2.0e-212 742.3 402 86.1
PSO541G2355 Papaver somniferum HOM05D005603 ORTHO05D006944 1.7e-211 739.2 402 85.8
PSO675G2068 Papaver somniferum HOM05D005603 ORTHO05D006944 1.7e-211 739.2 402 85.8
Eucgr.I02369 Eucalyptus grandis HOM05D005603 ORTHO05D006944 2.2e-211 738.8 402 85.6
MD15G1249000 Malus domestica HOM05D005603 ORTHO05D006944 6.4e-211 737.3 401 86.3
COL.COLO4_21962 Corchorus olitorius HOM05D005603 ORTHO05D006944 1.1e-210 736.5 402 87.1
AUR62007651 Chenopodium quinoa HOM05D005603 ORTHO05D006944 3.2e-210 734.9 401 85.3
FvH4_1g12160 Fragaria vesca HOM05D005603 ORTHO05D006944 4.2e-210 734.6 402 85.3
Manes.02G101300 Manihot esculenta HOM05D005603 ORTHO05D006944 4.2e-210 734.6 401 87.5
RcHm_v2.0_Chr2g0099911 Rosa chinensis HOM05D005603 ORTHO05D006944 4.2e-210 734.6 402 85.8
CiPaw.07G056000 Carya illinoinensis HOM05D005603 ORTHO05D006944 9.3e-210 733.4 403 86.6
Glyma.01G168600 Glycine max HOM05D005603 ORTHO05D006944 9.3e-210 733.4 404 85.6
Potri.005G117200 Populus trichocarpa HOM05D005603 ORTHO05D006944 9.3e-210 733.4 401 87.0
MSTRG.15764 Avicennia marina HOM05D005603 ORTHO05D006944 1.6e-209 732.6 402 84.8
Ca_24898_v3 Cicer arietinum L. HOM05D005603 ORTHO05D006944 1.6e-209 732.6 404 85.4
DCAR_021493 Daucus carota HOM05D005603 ORTHO05D006944 1.6e-209 732.6 399 85.7
HanXRQChr16g0531111 Helianthus annuus HOM05D005603 ORTHO05D006944 1.6e-209 732.6 401 85.0
TPR.G2333 Trifolium pratense HOM05D005603 ORTHO05D006944 1.6e-209 732.6 404 85.1
CANSAT01G2298 Cannabis sativa HOM05D005603 ORTHO05D006944 3.5e-209 731.5 400 86.5
Sopen02g029190 Solanum pennellii HOM05D005603 ORTHO05D006944 4.6e-209 731.1 403 85.4
VMungo1215G2039 Vigna mungo HOM05D005603 ORTHO05D006944 4.6e-209 731.1 404 85.6
Glyma.11G074800 Glycine max HOM05D005603 ORTHO05D006944 6.0e-209 730.7 404 85.4
Phvul.002G111500 Phaseolus vulgaris HOM05D005603 ORTHO05D006944 6.0e-209 730.7 404 85.4
Nitab4.5_0008176g0030 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.0e-208 729.9 418 82.8
Hma1.2p1_0743F.1_g211450 Hydrangea macrophylla HOM05D005603 ORTHO05D006944 1.3e-208 729.6 414 84.5
SGA_v2.0_scaffold47G17673 Striga asiatica HOM05D005603 ORTHO05D006944 1.3e-208 729.6 409 84.8
Gohir.A02G169100 Gossypium hirsutum HOM05D005603 ORTHO05D006944 3.0e-208 728.4 402 85.8
Gohir.D03G010900 Gossypium hirsutum HOM05D005603 ORTHO05D006944 5.1e-208 727.6 402 85.6
Gorai.003G011300 Gossypium raimondii HOM05D005603 ORTHO05D006944 5.1e-208 727.6 402 85.6
Psat2g155920 Pisum sativum HOM05D005603 ORTHO05D006944 5.1e-208 727.6 404 85.1
Medtr5g021520 Medicago truncatula HOM05D005603 ORTHO05D006944 6.7e-208 727.2 405 84.9
TWI09G0997 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 6.7e-208 727.2 402 85.3
ClCG01G020120 Citrullus lanatus HOM05D005603 ORTHO05D006944 1.1e-207 726.5 402 84.8
MELO3C007885.2 Cucumis melo HOM05D005603 ORTHO05D006944 1.9e-207 725.7 401 85.3
MD02G1111100 Malus domestica HOM05D005603 ORTHO05D006944 4.3e-207 724.5 401 84.5
CsaV3_6G046890 Cucumis sativus L. HOM05D005603 ORTHO05D006944 5.6e-207 724.2 401 85.0
Thecc.01G023100 Theobroma cacao HOM05D005603 ORTHO05D006944 9.6e-207 723.4 402 85.6
arahy.Tifrunner.gnm1.ann1.V913IW Arachis hypogaea HOM05D005603 ORTHO05D006944 2.8e-206 721.8 404 84.7
GSVIVG01018824001 Vitis vinifera HOM05D005603 ORTHO05D006944 3.7e-206 721.5 390 87.4
Migut.L00039 Erythranthe guttata HOM05D005603 ORTHO05D006944 4.8e-206 721.1 403 83.9
Hund14030 Selenicereus undatus HOM05D005603 ORTHO05D006944 4.8e-206 721.1 401 83.8
Lj2g0023828 Lotus japonicus HOM05D005603 ORTHO05D006944 1.1e-205 719.9 409 84.8
EL10As8g23850 Beta vulgaris HOM05D005603 ORTHO05D006944 6.9e-205 717.2 396 84.1
Lsat_1_v5_gn_3_73720 Lactuca sativa HOM05D005603 ORTHO05D006944 6.9e-205 717.2 395 85.1
Sed0002868 Sechium edule HOM05D005603 ORTHO05D006944 9.0e-205 716.8 402 84.6
Os06g0714000 Oryza sativa ssp. japonica HOM05D005603 ORTHO05D006944 1.2e-204 716.5 399 83.7
Ciclev10025760m.g Citrus clementina HOM05D005603 ORTHO05D006944 2.6e-204 715.3 401 83.3
Potri.007G015800 Populus trichocarpa HOM05D005603 ORTHO05D006944 5.8e-204 714.1 402 84.3
SalBow8G5567 Salvia bowleyana HOM05D005603 ORTHO05D006944 1.0e-203 713.4 414 82.4
THA.LOC104819186 Tarenaya hassleriana HOM05D005603 ORTHO05D006944 1.7e-203 712.6 402 83.3
Cc07_g10420 Coffea canephora HOM05D005603 ORTHO05D006944 2.9e-203 711.8 391 85.4
HPP92_025419 Vanilla planifolia HOM05D005603 ORTHO05D006944 2.9e-203 711.8 400 83.0
arahy.Tifrunner.gnm1.ann1.8YZ064 Arachis hypogaea HOM05D005603 ORTHO05D006944 2.5e-202 708.8 433 79.2
Duzib147G0771 Durio zibethinus HOM05D005603 ORTHO05D006944 2.5e-202 708.8 390 85.4
ECA246G4842 Erigeron canadensis HOM05D005603 ORTHO05D006944 3.2e-202 708.4 390 84.6
Carub.0005s1753 Capsella rubella HOM05D005603 ORTHO05D006944 4.2e-202 708.0 402 82.1
Nitab4.5_0000912g0020 Nicotiana tabacum HOM05D005603 ORTHO05D006944 1.2e-201 706.4 410 82.2
Thhalv10010418m.g Eutrema salsugineum HOM05D005603 ORTHO05D006944 1.6e-201 706.1 402 81.8
Peaxi162Scf00083g01233 Petunia axillaris HOM05D005603 ORTHO05D006944 2.1e-201 705.7 395 84.3
Hund16476 Selenicereus undatus HOM05D005603 ORTHO05D006944 2.7e-201 705.3 432 78.2
Aa31LG4G19220 Aethionema arabicum HOM05D005603 ORTHO05D006944 6.0e-201 704.1 402 83.1
AT3G51130 Arabidopsis thaliana HOM05D005603 ORTHO05D006944 1.0e-200 703.4 402 81.8
CSS0042462 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.0e-200 701.8 401 82.8
AL5G31550 Arabidopsis lyrata HOM05D005603 ORTHO05D006944 3.9e-200 701.4 402 82.1
Oeu035330.1 Olea europaea HOM05D005603 ORTHO05D006944 3.9e-200 701.4 403 82.1
PGSC0003DMG400003547 Solanum tuberosum HOM05D005603 ORTHO05D006944 5.1e-200 701.0 389 84.6
CSS0001882 Camellia sinensis var. sinensis HOM05D005603 ORTHO05D006944 3.3e-199 698.4 401 82.3
Sed0017160 Sechium edule HOM05D005603 ORTHO05D006944 8.2e-198 693.7 405 81.5
CAN.G358.2 Capsicum annuum HOM05D005603 ORTHO05D006944 1.8e-197 692.6 391 83.6
Haze_03808 Corylus avellana HOM05D005603 ORTHO05D006944 6.9e-197 690.6 400 82.8
Sp5g11080 Schrenkiella parvula HOM05D005603 ORTHO05D006944 2.6e-196 688.7 402 80.6
BcaC06g33053 Brassica carinata HOM05D005603 ORTHO05D006944 3.4e-196 688.3 402 80.6
Rhsim08G0035200 Rhododendron simsii HOM05D005603 ORTHO05D006944 5.9e-196 687.6 413 79.9
FAN28G0526 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.0e-195 686.8 402 81.1
CARHR160730 Cardamine hirsuta HOM05D005603 ORTHO05D006944 2.7e-193 678.7 402 78.9
A03p48150 Brassica napus HOM05D005603 ORTHO05D006944 1.5e-191 672.9 386 80.6
BraA03t13922Z Brassica rapa HOM05D005603 ORTHO05D006944 1.5e-191 672.9 386 80.6
FAN23G1635 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.5e-191 672.9 396 80.3
BolC7t45134H Brassica oleracea HOM05D005603 ORTHO05D006944 2.4e-189 665.6 388 80.2
Cpa.g.sc6.214 Carica papaya HOM05D005603 ORTHO05D006944 4.1e-189 664.8 419 77.8
TWI53G1238 Tripterygium wilfordii HOM05D005603 ORTHO05D006944 1.3e-187 659.8 364 84.6
MSTRG.3829 Avicennia marina HOM05D005603 ORTHO05D006944 1.1e-186 656.8 403 77.2
Lj4C215G4 Lonicera japonica HOM05D005603 ORTHO05D006944 1.1e-186 656.8 402 79.1
FAN19G0288 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.4e-186 656.4 386 80.6
Zm00001eb227930 Zea mays HOM05D005603 ORTHO05D006944 7.9e-185 650.6 399 77.2
C07p46180 Brassica napus HOM05D005603 ORTHO05D006944 1.0e-184 650.2 409 75.8
unitig_32.g11821 Utricularia gibba HOM05D005603 ORTHO05D006944 2.3e-184 649.0 385 78.7
vmacro22086 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 1.5e-183 646.4 357 84.0
Sabra05G0096200 Salix brachista HOM05D005603 ORTHO05D006944 5.7e-183 644.4 410 78.5
BraA09t39879Z Brassica rapa HOM05D005603 ORTHO05D006944 9.7e-183 643.7 387 77.3
FAN26G2705 Fragaria x ananassa HOM05D005603 ORTHO05D006944 1.7e-182 642.9 379 80.2
A09p44190 Brassica napus HOM05D005603 ORTHO05D006944 2.2e-182 642.5 387 77.0
BolC8t50258H Brassica oleracea HOM05D005603 ORTHO05D006944 1.4e-181 639.8 387 77.0
Duzib264G0505 Durio zibethinus HOM05D005603 ORTHO05D006944 7.7e-180 634.0 402 77.1
BcaB01g00547 Brassica carinata HOM05D005603 ORTHO05D006944 4.2e-178 628.2 375 77.9
Sabra07G0013000 Salix brachista HOM05D005603 ORTHO05D006944 1.2e-177 626.7 402 76.4
vmacro18394 Vaccinium macrocarpon HOM05D005603 ORTHO05D006944 2.8e-174 615.5 341 83.9
Pp3c2_6370 Physcomitrium patens HOM05D005603 ORTHO05D006944 3.2e-170 602.1 393 72.0
C08p26410 Brassica napus HOM05D005603 ORTHO05D006944 3.6e-169 598.6 356 78.4
AagrBONN_evm.TU.Sc2ySwM_228.543 Anthoceros agrestis HOM05D005603 ORTHO05D006944 1.1e-167 593.6 398 71.4
Lalb_Chr16g0377611 Lupinus albus HOM05D005603 ORTHO05D006944 2.6e-167 592.4 325 84.0
Pp3c10_8990 Physcomitrium patens HOM05D005603 ORTHO05D006944 8.2e-166 587.4 394 70.1
Ah.02g124640 Amaranthus hybridus HOM05D005603 ORTHO05D006944 5.3e-165 584.7 395 72.4
SMO117G0153 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 3.8e-163 578.6 395 69.6
Dinv40059 Davidia involucrata HOM05D005603 ORTHO05D006944 1.8e-157 559.7 305 86.2
Dinv33602 Davidia involucrata HOM05D005603 ORTHO05D006944 4.2e-154 548.5 306 84.6
SEGI_22640 Sequoiadendron giganteum HOM05D005603 ORTHO05D006944 1.6e-153 546.6 345 75.4
Actinidia31012 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.5e-151 540.0 306 84.0
Mapoly0152s0028 Marchantia polymorpha HOM05D005603 ORTHO05D006944 2.0e-151 539.7 400 65.2
Mapoly0094s0075 Marchantia polymorpha HOM05D005603 ORTHO05D006944 2.0e-148 529.6 393 64.4
Lalb_Chr09g0321921 Lupinus albus HOM05D005603 ORTHO05D006944 3.2e-117 426.0 242 84.7
SMO037G0002 Selaginella moellendorffii HOM05D005603 ORTHO05D006944 5.6e-106 388.7 266 68.8
Solyc02g075630.3 Solanum lycopersicum HOM05D005603 ORTHO05D006944 3.0e-99 366.3 208 83.2
Atru.chr3.766 Acer truncatum HOM05D005603 ORTHO05D006944 8.1e-89 331.6 186 83.3
Nn015s41468 Nelumbo nucifera HOM05D005603 ORTHO05D006944 5.3e-88 328.9 171 88.3
Actinidia26078 Actinidia chinensis HOM05D005603 ORTHO05D006944 1.0e-86 324.7 218 75.7
Migut.H02480 Erythranthe guttata HOM05D005603 ORTHO05D006944 1.1e-85 321.2 371 51.2
CBR_g36682 Chara braunii HOM05D005603 ORTHO05D000002 1.4e-80 304.3 224 64.7
Lalb_Chr09g0321931 Lupinus albus HOM05D005603 ORTHO05D006944 1.8e-80 303.9 160 85.6
PRCOL_00000516 Prasinoderma coloniale HOM05D005603 ORTHO05D006944 2.2e-78 297.0 434 39.9
Nn015s41469 Nelumbo nucifera HOM05D005603 ORTHO05D006944 4.8e-73 279.3 146 87.7
CBR_g36680 Chara braunii HOM05D005603 ORTHO05D006944 1.8e-59 234.2 172 62.2
BcaC06g33054 Brassica carinata HOM05D005603 ORTHO05D006944 7.0e-56 222.2 144 73.6
Atru.chr2.40 Acer truncatum HOM05D005603 ORTHO05D006944 3.2e-45 186.8 189 54.5
Actinidia31013 Actinidia chinensis HOM05D005603 ORTHO05D006944 4.5e-31 139.8 72 87.5
RcHm_v2.0_Chr7g0231521 Rosa chinensis HOM05D005603 ORTHO05D006944 1.2e-20 105.1 201 39.8
Cfa027245 Carpinus fangiana HOM05D005603 ORTHO05D006944 2.9e-17 94.0 274 29.2
COL.COLO4_32114 Corchorus olitorius HOM05D000931 ORTHO05D002226 4.6e-07 60.1 51 56.9


User provided reference genes

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