Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2537 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 4.0e-54 214.5 110 100.0
CDE02G0163 Ceratophyllum demersum HOM05D004191 ORTHO05D004887 6.3e-52 207.2 106 98.1
Cpa.g.sc97.62 Carica papaya HOM05D004191 ORTHO05D004887 2.3e-49 198.7 106 90.6
MD03G1210500 Malus domestica HOM05D004191 ORTHO05D004887 2.9e-49 198.4 106 90.6
FvH4_3g21920 Fragaria vesca HOM05D004191 ORTHO05D004887 3.8e-49 198.0 106 89.6
FAN16G1028 Fragaria x ananassa HOM05D004191 ORTHO05D004887 3.8e-49 198.0 106 89.6
Prupe.4G204700 Prunus persica HOM05D004191 ORTHO05D004887 3.8e-49 198.0 106 89.6
QL08p013180 Quercus lobata HOM05D004191 ORTHO05D004887 3.8e-49 198.0 106 90.6
RcHm_v2.0_Chr5g0037731 Rosa chinensis HOM05D004191 ORTHO05D004887 3.8e-49 198.0 106 89.6
Ca_18852_v3 Cicer arietinum L. HOM05D004191 ORTHO05D004887 5.0e-49 197.6 106 89.6
Dinv22301 Davidia involucrata HOM05D004191 ORTHO05D004887 5.0e-49 197.6 107 90.7
FAN25G1832 Fragaria x ananassa HOM05D004191 ORTHO05D004887 5.0e-49 197.6 106 88.7
Thecc.05G140700 Theobroma cacao HOM05D004191 ORTHO05D004887 5.0e-49 197.6 106 90.6
Cc05_g13280 Coffea canephora HOM05D004191 ORTHO05D004887 6.6e-49 197.2 106 90.6
FAN21G0017 Fragaria x ananassa HOM05D004191 ORTHO05D004887 8.6e-49 196.8 106 88.7
MD11G1225200 Malus domestica HOM05D004191 ORTHO05D004887 8.6e-49 196.8 106 89.6
Medtr4g081170 Medicago truncatula HOM05D004191 ORTHO05D004887 8.6e-49 196.8 106 88.7
vmacro16476 Vaccinium macrocarpon HOM05D004191 ORTHO05D004887 8.6e-49 196.8 107 88.8
CANSAT80G0944 Cannabis sativa HOM05D004191 ORTHO05D004887 1.5e-48 196.1 106 90.6
CiPaw.12G126500 Carya illinoinensis HOM05D004191 ORTHO05D004887 1.5e-48 196.1 106 90.6
Oeu032442.1 Olea europaea HOM05D004191 ORTHO05D004887 1.5e-48 196.1 107 89.7
Duzib093G1201 Durio zibethinus HOM05D004191 ORTHO05D004887 1.9e-48 195.7 106 89.6
Duzib106G0849 Durio zibethinus HOM05D004191 ORTHO05D004887 1.9e-48 195.7 106 89.6
Lj1A865T18 Lonicera japonica HOM05D004191 ORTHO05D004887 1.9e-48 195.7 106 89.6
Rhsim12G0150700 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.9e-48 195.7 107 87.9
CiPaw.11G184500 Carya illinoinensis HOM05D004191 ORTHO05D004887 2.5e-48 195.3 106 89.6
Lj3g0027602 Lotus japonicus HOM05D004191 ORTHO05D004887 2.5e-48 195.3 106 88.7
Nn1g08677 Nelumbo nucifera HOM05D004191 ORTHO05D004887 2.5e-48 195.3 107 89.7
Nitab4.5_0002838g0150 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.5e-48 195.3 106 89.6
GSVIVG01002004001 Vitis vinifera HOM05D004191 ORTHO05D004887 2.5e-48 195.3 107 87.9
ATR0609G026 Amborella trichopoda HOM05D004191 ORTHO05D004887 3.3e-48 194.9 107 88.8
Ciclev10009626m.g Citrus clementina HOM05D004191 ORTHO05D004887 3.3e-48 194.9 106 87.7
COL.COLO4_05062 Corchorus olitorius HOM05D004191 ORTHO05D004887 3.3e-48 194.9 106 89.6
Dinv40713 Davidia involucrata HOM05D004191 ORTHO05D004887 3.3e-48 194.9 105 90.5
Migut.M01809 Erythranthe guttata HOM05D004191 ORTHO05D004887 3.3e-48 194.9 106 88.7
MBI02_g10101_MAGBIO Magnolia biondii HOM05D004191 ORTHO05D004887 3.3e-48 194.9 107 87.9
Nitab4.5_0005420g0050 Nicotiana tabacum HOM05D004191 ORTHO05D004887 3.3e-48 194.9 106 88.7
THA.LOC104799884 Tarenaya hassleriana HOM05D004191 ORTHO05D004887 3.3e-48 194.9 106 87.7
Aa31LG3G10650 Aethionema arabicum HOM05D004191 ORTHO05D004887 4.3e-48 194.5 106 87.7
Manes.03G123300 Manihot esculenta HOM05D004191 ORTHO05D004887 4.3e-48 194.5 106 89.6
TPR.G25893 Trifolium pratense HOM05D004191 ORTHO05D004887 4.3e-48 194.5 106 87.7
TAR371G0103 Trochodendron aralioides HOM05D004191 ORTHO05D004887 4.3e-48 194.5 107 87.9
Aqoxy4G00334 Aquilegia oxysepala HOM05D004191 ORTHO05D004887 5.6e-48 194.1 107 87.9
SGA_v2.0_scaffold416G51230 Striga asiatica HOM05D004191 ORTHO05D004887 7.3e-48 193.7 106 86.8
AL8G30180 Arabidopsis lyrata HOM05D004191 ORTHO05D004887 9.5e-48 193.4 106 86.8
arahy.Tifrunner.gnm1.ann1.HY89VY Arachis hypogaea HOM05D004191 ORTHO05D004887 9.5e-48 193.4 106 86.8
Lsat_1_v5_gn_7_108481 Lactuca sativa HOM05D004191 ORTHO05D004887 9.5e-48 193.4 106 88.7
PGR031G0276 Punica granatum HOM05D004191 ORTHO05D004887 9.5e-48 193.4 103 90.3
PGSC0003DMG400005405 Solanum tuberosum HOM05D004191 ORTHO05D004887 9.5e-48 193.4 106 88.7
TPR.G24299 Trifolium pratense HOM05D004191 ORTHO05D004887 9.5e-48 193.4 106 87.7
unitig_0.g2386 Utricularia gibba HOM05D004191 ORTHO05D004887 9.5e-48 193.4 106 87.7
CSS0034391 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.2e-47 193.0 106 89.6
ECA236G4841 Erigeron canadensis HOM05D004191 ORTHO05D004887 1.2e-47 193.0 106 87.7
Hma1.2p1_0049F.1_g028640 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 1.2e-47 193.0 105 89.5
Lalb_Chr19g0134771 Lupinus albus HOM05D004191 ORTHO05D004887 1.2e-47 193.0 106 86.8
Potri.001G418400 Populus trichocarpa HOM05D004191 ORTHO05D004887 1.2e-47 193.0 106 87.7
CSS0028201 Camellia sinensis var. sinensis HOM05D004191 ORTHO05D004887 1.6e-47 192.6 106 89.6
HanXRQChr02g0054141 Helianthus annuus HOM05D004191 ORTHO05D004887 1.6e-47 192.6 106 87.7
Sabra16G0284100 Salix brachista HOM05D004191 ORTHO05D004887 1.6e-47 192.6 106 86.8
TAR626G0300 Trochodendron aralioides HOM05D004191 ORTHO05D004887 1.6e-47 192.6 105 88.6
AT5G54750 Arabidopsis thaliana HOM05D004191 ORTHO05D004887 2.1e-47 192.2 106 85.8
arahy.Tifrunner.gnm1.ann1.B9KZG1 Arachis hypogaea HOM05D004191 ORTHO05D004887 2.1e-47 192.2 106 86.8
Gohir.A09G118400 Gossypium hirsutum HOM05D004191 ORTHO05D004887 2.1e-47 192.2 106 87.7
Gohir.D09G115300 Gossypium hirsutum HOM05D004191 ORTHO05D004887 2.1e-47 192.2 106 87.7
Gorai.006G132900 Gossypium raimondii HOM05D004191 ORTHO05D004887 2.1e-47 192.2 106 87.7
Lalb_Chr03g0030141 Lupinus albus HOM05D004191 ORTHO05D004887 2.1e-47 192.2 106 85.8
Carub.0008s1502 Capsella rubella HOM05D004191 ORTHO05D004887 2.8e-47 191.8 106 85.8
CARHR268090 Cardamine hirsuta HOM05D004191 ORTHO05D004887 2.8e-47 191.8 106 85.8
Eucgr.F03430 Eucalyptus grandis HOM05D004191 ORTHO05D004887 2.8e-47 191.8 102 91.2
Lsat_1_v5_gn_5_5821 Lactuca sativa HOM05D004191 ORTHO05D004887 2.8e-47 191.8 107 86.0
Sp2g07630 Schrenkiella parvula HOM05D004191 ORTHO05D004887 2.8e-47 191.8 106 85.8
SpUn0117_0020 Schrenkiella parvula HOM05D004191 ORTHO05D004887 2.8e-47 191.8 106 85.8
Sopen01g040260 Solanum pennellii HOM05D004191 ORTHO05D004887 2.8e-47 191.8 106 87.7
CAN.G134.12 Capsicum annuum HOM05D004191 ORTHO05D004887 3.6e-47 191.4 106 86.8
PSO675G8300 Papaver somniferum HOM05D004191 ORTHO05D004887 3.6e-47 191.4 107 86.0
SalBow7G2717 Salvia bowleyana HOM05D004191 ORTHO05D004887 4.7e-47 191.0 106 85.8
Hund11592 Selenicereus undatus HOM05D004191 ORTHO05D004887 4.7e-47 191.0 106 86.8
HPP92_013205 Vanilla planifolia HOM05D001003 ORTHO05D004887 4.7e-47 191.0 107 86.9
MSTRG.12958 Avicennia marina HOM05D004191 ORTHO05D004887 6.1e-47 190.7 106 84.9
Eucgr.F00978 Eucalyptus grandis HOM05D004191 ORTHO05D004887 6.1e-47 190.7 106 87.7
Thhalv10019192m.g Eutrema salsugineum HOM05D004191 ORTHO05D004887 6.1e-47 190.7 106 84.9
Phvul.011G139700 Phaseolus vulgaris HOM05D004191 ORTHO05D004887 6.1e-47 190.7 106 86.8
Solyc10g006490.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 6.1e-47 190.7 106 86.8
SGA_v2.0_scaffold24G10288 Striga asiatica HOM05D004191 ORTHO05D004887 6.1e-47 190.7 106 85.8
Actinidia34670 Actinidia chinensis HOM05D004191 ORTHO05D004887 8.0e-47 190.3 106 86.8
Peaxi162Scf00082g00016 Petunia axillaris HOM05D004191 ORTHO05D004887 8.0e-47 190.3 106 85.8
Sp4g10480 Schrenkiella parvula HOM05D004191 ORTHO05D004887 8.0e-47 190.3 106 84.9
TWI39G0061 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 8.0e-47 190.3 106 85.8
Oeu007633.1 Olea europaea HOM05D004191 ORTHO05D004887 1.0e-46 189.9 115 83.5
Solyc01g096530.3 Solanum lycopersicum HOM05D004191 ORTHO05D004887 1.0e-46 189.9 106 86.8
BcaB07g31034 Brassica carinata HOM05D004191 ORTHO05D004887 1.4e-46 189.5 106 84.0
BcaC04g21960 Brassica carinata HOM05D004191 ORTHO05D004887 1.4e-46 189.5 106 84.0
A09p20070 Brassica napus HOM05D004191 ORTHO05D004887 1.4e-46 189.5 106 84.0
C09p25460 Brassica napus HOM05D004191 ORTHO05D004887 1.4e-46 189.5 106 84.0
BraA09t37620Z Brassica rapa HOM05D004191 ORTHO05D004887 1.4e-46 189.5 106 84.0
Migut.H01854 Erythranthe guttata HOM05D004191 ORTHO05D004887 1.4e-46 189.5 106 84.9
PSO170G1932 Papaver somniferum HOM05D004191 ORTHO05D004887 1.4e-46 189.5 107 84.1
Eucgr.F00980 Eucalyptus grandis HOM05D004191 ORTHO05D004887 1.8e-46 189.1 106 86.8
Sed0000628 Sechium edule HOM05D004191 ORTHO05D004887 1.8e-46 189.1 106 86.8
VMungo1127G0852 Vigna mungo HOM05D004191 ORTHO05D004887 1.8e-46 189.1 106 84.9
FAN11G1314 Fragaria x ananassa HOM05D004191 ORTHO05D004887 2.3e-46 188.7 119 79.8
MSTRG.6892 Avicennia marina HOM05D004191 ORTHO05D004887 3.0e-46 188.3 106 84.0
ATR0109G002 Amborella trichopoda HOM05D004191 ORTHO05D004887 4.0e-46 188.0 107 86.0
MELO3C018102.2 Cucumis melo HOM05D004191 ORTHO05D004887 4.0e-46 188.0 106 86.8
CsaV3_3G023130 Cucumis sativus L. HOM05D004191 ORTHO05D004887 4.0e-46 188.0 106 86.8
Glyma.06G269400 Glycine max HOM05D004191 ORTHO05D004887 4.0e-46 188.0 106 84.9
Glyma.12G135200 Glycine max HOM05D004191 ORTHO05D004887 4.0e-46 188.0 106 84.9
Medtr8g027700 Medicago truncatula HOM05D004191 ORTHO05D004887 6.8e-46 187.2 106 84.0
arahy.Tifrunner.gnm1.ann1.N3PQ25 Arachis hypogaea HOM05D004191 ORTHO05D004887 8.9e-46 186.8 107 82.2
arahy.Tifrunner.gnm1.ann1.T6DWBF Arachis hypogaea HOM05D004191 ORTHO05D004887 8.9e-46 186.8 107 82.2
EL10Ac5g13057 Beta vulgaris HOM05D004191 ORTHO05D004887 8.9e-46 186.8 106 84.0
Os03g0402000 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 8.9e-46 186.8 103 87.4
Os07g0642300 Oryza sativa ssp. japonica HOM05D004191 ORTHO05D004887 8.9e-46 186.8 103 87.4
Zm00001eb067130 Zea mays HOM05D004191 ORTHO05D004887 8.9e-46 186.8 105 85.7
AUR62039960 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.5e-45 186.0 106 83.0
Zm00001eb433090 Zea mays HOM05D004191 ORTHO05D004887 2.6e-45 185.3 105 84.8
Ah.02g116780 Amaranthus hybridus HOM05D004191 ORTHO05D004887 3.4e-45 184.9 106 82.1
Sc15g0001730 Simmondsia chinensis HOM05D004191 ORTHO05D004887 3.4e-45 184.9 106 82.1
Sed0012224 Sechium edule HOM05D004191 ORTHO05D004887 5.8e-45 184.1 106 84.0
Hma1.2p1_0774F.1_g216345 Hydrangea macrophylla HOM05D004191 ORTHO05D004887 9.8e-45 183.3 105 86.7
Sc22g0000820 Simmondsia chinensis HOM05D004191 ORTHO05D004887 2.9e-44 181.8 106 81.1
CAN.G1110.10 Capsicum annuum HOM05D004191 ORTHO05D004887 3.7e-44 181.4 120 76.7
PGR083G1136 Punica granatum HOM05D004191 ORTHO05D004887 8.3e-44 180.3 112 80.4
PSO782G4612 Papaver somniferum HOM05D004191 ORTHO05D004887 1.8e-43 179.1 123 73.2
BolC9t55449H Brassica oleracea HOM05D004191 ORTHO05D004887 4.1e-43 177.9 125 71.2
Sopen10g002440 Solanum pennellii HOM05D004191 ORTHO05D004887 5.4e-43 177.6 125 72.8
TWI38G1569 Tripterygium wilfordii HOM05D004191 ORTHO05D004887 2.0e-42 175.6 127 71.7
Manes.15G076000 Manihot esculenta HOM05D004191 ORTHO05D004887 1.0e-41 173.3 105 80.0
Mapoly0006s0106 Marchantia polymorpha HOM05D004191 ORTHO05D004887 3.0e-41 171.8 104 79.8
Hund24114 Selenicereus undatus HOM05D004191 ORTHO05D004887 1.9e-40 169.1 130 68.5
BcaB07g30600 Brassica carinata HOM05D004191 ORTHO05D004887 5.6e-40 167.5 105 78.1
AagrBONN_evm.TU.Sc2ySwM_344.5600 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.6e-39 166.0 106 76.4
AagrBONN_evm.TU.Sc2ySwM_344.5601 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.6e-39 166.0 106 76.4
ClCG05G014740 Citrullus lanatus HOM05D004191 ORTHO05D004887 1.6e-39 166.0 160 58.1
AagrBONN_evm.TU.Sc2ySwM_362.1580 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.1e-38 163.3 106 75.5
AagrBONN_evm.TU.Sc2ySwM_362.1587 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.1e-38 163.3 106 75.5
CBR_g9060 Chara braunii HOM05D004191 ORTHO05D004887 5.2e-38 161.0 106 72.6
SMO165G0074 Selaginella moellendorffii HOM05D004191 ORTHO05D004887 1.2e-37 159.8 106 71.7
Nn5g28123 Nelumbo nucifera HOM05D004191 ORTHO05D004887 9.8e-37 156.8 85 91.8
AagrBONN_evm.TU.Sc2ySwM_344.5599 Anthoceros agrestis HOM05D004191 ORTHO05D004887 1.4e-35 152.9 91 79.1
Pp3c6_29730 Physcomitrium patens HOM05D004191 ORTHO05D004887 7.8e-34 147.1 94 74.5
AUR62030012 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.0e-33 146.7 89 80.9
Cpa.g.sc2.173 Carica papaya HOM05D004191 ORTHO05D004887 1.5e-32 142.9 135 56.3
Peaxi162Scf01434g00020 Petunia axillaris HOM05D004191 ORTHO05D004887 1.5e-32 142.9 106 71.7
Peaxi162Scf01475g00001 Petunia axillaris HOM05D004191 ORTHO05D004887 7.3e-32 140.6 97 73.2
Nitab4.5_0002229g0200 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.6e-29 132.1 106 64.2
Nitab4.5_0002342g0090 Nicotiana tabacum HOM05D004191 ORTHO05D004887 2.6e-29 132.1 106 64.2
Cre03.g145607 Chlamydomonas reinhardtii HOM05D004191 ORTHO05D004887 7.5e-29 130.6 104 59.6
MCO14G457 Micromonas commoda HOM05D004191 ORTHO05D004887 2.9e-28 128.6 111 59.5
Peaxi162Scf08257g00003 Petunia axillaris HOM05D004191 ORTHO05D004887 2.7e-26 122.1 85 72.9
Pp3c2_32190 Physcomitrium patens HOM05D004191 ORTHO05D004887 9.9e-21 103.6 68 72.1
PRCOL_00004686 Prasinoderma coloniale HOM05D004191 ORTHO05D004887 3.8e-20 101.7 88 54.5
AUR62007507 Chenopodium quinoa HOM05D004191 ORTHO05D004887 1.1e-19 100.1 77 63.6
Cfa020409 Carpinus fangiana HOM05D004191 ORTHO05D004887 5.4e-19 97.8 52 92.3
COL.COLO4_37955 Corchorus olitorius HOM05D004191 ORTHO05D004887 7.8e-18 94.0 52 90.4
Haze_09622 Corylus avellana HOM05D004191 ORTHO05D004887 1.3e-17 93.2 49 93.9
Haze_09618 Corylus avellana HOM05D004191 ORTHO05D004887 1.8e-14 82.8 45 88.9
PGSC0003DMG400029125 Solanum tuberosum HOM05D004191 ORTHO05D004887 1.5e-13 79.7 106 44.3
Medtr4g027400 Medicago truncatula HOM05D004191 ORTHO05D004887 6.4e-12 74.3 47 74.5
Rhsim01G0090000 Rhododendron simsii HOM05D004191 ORTHO05D004887 1.9e-11 72.8 70 60.0
HanXRQChr11g0332951 Helianthus annuus HOM05D004191 ORTHO05D004887 1.0e-09 67.0 37 81.1


User provided reference genes

Program Settings