Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2529 Ceratophyllum demersum HOM05D001593 ORTHO05D010032 1.6e-64 249.2 124 100.0
Prupe.4G188300 Prunus persica HOM05D001593 ORTHO05D010032 6.7e-26 120.9 116 51.7
Sabra16G0268900 Salix brachista HOM05D001593 ORTHO05D010032 4.4e-25 118.2 118 50.0
Potri.001G405600 Populus trichocarpa HOM05D001593 ORTHO05D010032 9.7e-25 117.1 118 49.2
Manes.03G115300 Manihot esculenta HOM05D001593 ORTHO05D010032 1.3e-24 116.7 118 52.5
TWI38G2157 Tripterygium wilfordii HOM05D001593 ORTHO05D010032 1.3e-24 116.7 117 50.4
CiPaw.12G122400 Carya illinoinensis HOM05D001593 ORTHO05D010032 2.2e-24 115.9 119 51.3
Sabra16G0267000 Salix brachista HOM05D001593 ORTHO05D010032 3.7e-24 115.2 118 48.3
Potri.011G127800 Populus trichocarpa HOM05D001593 ORTHO05D010032 4.1e-23 111.7 118 48.3
SalBow7G3151 Salvia bowleyana HOM05D001593 ORTHO05D010032 5.3e-23 111.3 116 48.3
Aqoxy4G01373 Aquilegia oxysepala HOM05D001593 ORTHO05D010032 7.0e-23 110.9 116 45.7
Eucgr.F03348 Eucalyptus grandis HOM05D001593 ORTHO05D010032 7.7e-22 107.5 116 50.9
QL08p018774 Quercus lobata HOM05D001593 ORTHO05D010032 1.3e-21 106.7 117 48.7
Eucgr.F03349 Eucalyptus grandis HOM05D001593 ORTHO05D010032 1.7e-21 106.3 118 46.6
Cc01_g01380 Coffea canephora HOM05D001593 ORTHO05D010032 2.9e-21 105.5 118 42.4
Lalb_Chr03g0030521 Lupinus albus HOM05D001593 ORTHO05D010032 5.0e-21 104.8 117 43.6
FvH4_3g20820 Fragaria vesca HOM05D001593 ORTHO05D010032 6.5e-21 104.4 119 45.4
Lalb_Chr03g0030461 Lupinus albus HOM05D001593 ORTHO05D010032 8.5e-21 104.0 117 46.2
Lalb_Chr17g0345681 Lupinus albus HOM05D001593 ORTHO05D010032 8.5e-21 104.0 120 42.5
ECA246G1386 Erigeron canadensis HOM05D001593 ORTHO05D010032 1.1e-20 103.6 116 42.2
Prupe.4G188400 Prunus persica HOM05D001593 ORTHO05D010032 1.1e-20 103.6 114 48.2
FAN16G2191 Fragaria x ananassa HOM05D001593 ORTHO05D010032 3.2e-20 102.1 118 45.8
ClCG10G006650 Citrullus lanatus HOM05D001593 ORTHO05D010032 5.5e-20 101.3 120 43.3
DCAR_009980 Daucus carota HOM05D001593 ORTHO05D010032 9.4e-20 100.5 116 44.8
Glyma.06G249800 Glycine max HOM05D001593 ORTHO05D010032 1.6e-19 99.8 118 44.1
HanXRQChr05g0156501 Helianthus annuus HOM05D001593 ORTHO05D010032 1.6e-19 99.8 116 42.2
Lalb_Chr19g0134421 Lupinus albus HOM05D001593 ORTHO05D010032 2.1e-19 99.4 117 41.9
Lsat_1_v5_gn_5_7021 Lactuca sativa HOM05D001593 ORTHO05D010032 2.7e-19 99.0 119 43.7
Lj3g0022181 Lotus japonicus HOM05D001593 ORTHO05D010032 2.7e-19 99.0 121 40.5
Lj3g0024706 Lotus japonicus HOM05D001593 ORTHO05D010032 3.6e-19 98.6 121 41.3
Sed0008194 Sechium edule HOM05D001593 ORTHO05D010032 4.7e-19 98.2 120 40.8
Psat4g174160 Pisum sativum HOM05D001593 ORTHO05D010032 6.1e-19 97.8 117 41.9
TPR.G23028 Trifolium pratense HOM05D001593 ORTHO05D010032 6.1e-19 97.8 120 43.3
ClCG10G006610 Citrullus lanatus HOM05D001593 ORTHO05D010032 1.0e-18 97.1 122 44.3
CsaV3_3G006040 Cucumis sativus L. HOM05D001593 ORTHO05D010032 1.0e-18 97.1 120 40.8
arahy.Tifrunner.gnm1.ann1.SVGI7B Arachis hypogaea HOM05D001593 ORTHO05D010032 1.4e-18 96.7 120 41.7
TPR.G7332 Trifolium pratense HOM05D001593 ORTHO05D010032 3.0e-18 95.5 117 41.0
MELO3C016546.2 Cucumis melo HOM05D001593 ORTHO05D010032 5.2e-18 94.7 122 41.8
VMungo1309G1650 Vigna mungo HOM05D001593 ORTHO05D010032 5.2e-18 94.7 117 42.7
arahy.Tifrunner.gnm1.ann1.I7A6WZ Arachis hypogaea HOM05D001593 ORTHO05D010032 6.8e-18 94.4 120 40.8
Medtr3g055120 Medicago truncatula HOM05D001593 ORTHO05D010032 6.8e-18 94.4 118 41.5
VMungo1127G1295 Vigna mungo HOM05D001593 ORTHO05D010032 1.5e-17 93.2 118 39.8
CsaV3_3G006030 Cucumis sativus L. HOM05D001593 ORTHO05D010032 2.6e-17 92.4 122 41.0
Lsat_1_v5_gn_5_7041 Lactuca sativa HOM05D001593 ORTHO05D010032 2.6e-17 92.4 119 41.2
Actinidia05168 Actinidia chinensis HOM05D001593 ORTHO05D010032 4.4e-17 91.7 150 35.3
Phvul.011G153600 Phaseolus vulgaris HOM05D001593 ORTHO05D010032 5.7e-17 91.3 117 39.3
CSS0027856 Camellia sinensis var. sinensis HOM05D001593 ORTHO05D010032 7.5e-17 90.9 178 34.3
Prupe.4G188200 Prunus persica HOM05D001593 ORTHO05D010032 7.5e-17 90.9 118 42.4
FvH4_3g20810 Fragaria vesca HOM05D001593 ORTHO05D010032 9.8e-17 90.5 115 44.3
FAN16G0784 Fragaria x ananassa HOM05D001593 ORTHO05D010032 9.8e-17 90.5 115 44.3
FAN25G3755 Fragaria x ananassa HOM05D001593 ORTHO05D010032 9.8e-17 90.5 115 44.3
RcHm_v2.0_Chr5g0035101 Rosa chinensis HOM05D001593 ORTHO05D010032 2.2e-16 89.4 115 42.6
ECA246G2813 Erigeron canadensis HOM05D001593 ORTHO05D010032 6.3e-16 87.8 120 36.7
MD11G1238400 Malus domestica HOM05D001593 ORTHO05D010032 1.4e-15 86.7 95 46.3
MD03G1220500 Malus domestica HOM05D001593 ORTHO05D010032 1.8e-15 86.3 119 43.7
Medtr3g055130 Medicago truncatula HOM05D001593 ORTHO05D010032 3.1e-15 85.5 119 39.5
SEGI_29216 Sequoiadendron giganteum HOM05D001593 ORTHO05D000001 1.6e-14 83.2 91 45.1
Phvul.011G154100 Phaseolus vulgaris HOM05D001593 ORTHO05D010032 2.7e-14 82.4 117 37.6
MD03G1220400 Malus domestica HOM05D001593 ORTHO05D010032 1.3e-13 80.1 114 43.9
SEGI_19703 Sequoiadendron giganteum HOM05D001593 ORTHO05D010032 2.5e-12 75.9 85 41.2
PSO832G0778 Papaver somniferum HOM05D001593 ORTHO05D010032 2.1e-11 72.8 118 39.8
RcHm_v2.0_Chr5g0035111 Rosa chinensis HOM05D001593 ORTHO05D010032 4.0e-10 68.6 88 47.7
PGR031G2663 Punica granatum HOM05D001593 ORTHO05D010032 1.2e-09 67.0 120 35.8
HPP92_000927 Vanilla planifolia HOM05D001593 ORTHO05D010032 2.0e-09 66.2 89 36.0
Sed0013638 Sechium edule HOM05D001593 ORTHO05D010032 2.6e-09 65.9 100 40.0
Phvul.011G019300 Phaseolus vulgaris HOM05D001593 ORTHO05D002007 3.7e-08 62.0 118 29.7
VMungo1127G0865 Vigna mungo HOM05D001593 ORTHO05D002007 6.3e-08 61.2 117 29.1
CsaV3_2G036450 Cucumis sativus L. HOM05D001593 ORTHO05D002007 1.1e-07 60.5 116 31.9
Glyma.12G017100 Glycine max HOM05D001593 ORTHO05D002007 1.1e-07 60.5 118 31.4
Hma1.2p1_2000F.1_g310590 Hydrangea macrophylla HOM05D001593 ORTHO05D002007 1.1e-07 60.5 115 27.8
MELO3C003859.2 Cucumis melo HOM05D001593 ORTHO05D002007 1.8e-07 59.7 116 33.6
ClCG09G016940 Citrullus lanatus HOM05D001593 ORTHO05D002007 2.4e-07 59.3 92 39.1
Dinv17248 Davidia involucrata HOM05D001593 ORTHO05D002007 3.1e-07 58.9 115 29.6
Ca_18955_v3 Cicer arietinum L. HOM05D001593 ORTHO05D002007 4.1e-07 58.5 117 29.9
ClCG09G016960 Citrullus lanatus HOM05D001593 ORTHO05D002007 5.4e-07 58.2 92 40.2
MELO3C003860.2 Cucumis melo HOM05D001593 ORTHO05D002007 5.4e-07 58.2 117 30.8
CsaV3_2G036430 Cucumis sativus L. HOM05D001593 ORTHO05D002007 5.4e-07 58.2 106 34.0
Gohir.A11G303200 Gossypium hirsutum HOM05D001593 ORTHO05D002007 5.4e-07 58.2 123 26.0
PSO170G1879 Papaver somniferum HOM05D001593 ORTHO05D002007 5.4e-07 58.2 117 34.2
PSO170G3368 Papaver somniferum HOM05D001593 ORTHO05D002007 5.4e-07 58.2 117 34.2
Lj3g0025090 Lotus japonicus HOM05D001593 ORTHO05D002007 7.0e-07 57.8 116 31.9
PSO170G6165 Papaver somniferum HOM05D001593 ORTHO05D002007 7.0e-07 57.8 117 34.2
PGSC0003DMG400003399 Solanum tuberosum HOM05D001593 ORTHO05D002007 7.0e-07 57.8 117 30.8
CANSAT56G3263 Cannabis sativa HOM05D001593 ORTHO05D002007 9.2e-07 57.4 95 31.6
MELO3C021886.2 Cucumis melo HOM05D001593 ORTHO05D002007 9.2e-07 57.4 107 36.4
PSO170G2063 Papaver somniferum HOM05D001593 ORTHO05D002007 9.2e-07 57.4 117 33.3
PGSC0003DMG400041243 Solanum tuberosum HOM05D001593 ORTHO05D002007 9.2e-07 57.4 117 30.8
Peaxi162Scf00372g00122 Petunia axillaris HOM05D001593 ORTHO05D002007 1.2e-06 57.0 122 28.7
Cc00_g12290 Coffea canephora HOM05D001593 ORTHO05D002007 1.6e-06 56.6 118 33.9
Cc00_g16670 Coffea canephora HOM05D001593 ORTHO05D002007 1.6e-06 56.6 118 33.9
MELO3C021884.2 Cucumis melo HOM05D001593 ORTHO05D002007 2.0e-06 56.2 116 31.9
CsaV3_2G036440 Cucumis sativus L. HOM05D001593 ORTHO05D002007 2.0e-06 56.2 122 33.6
Migut.C00401 Erythranthe guttata HOM05D001593 ORTHO05D002007 2.0e-06 56.2 114 29.8
Gorai.007G348500 Gossypium raimondii HOM05D001593 ORTHO05D002007 2.0e-06 56.2 123 26.8
Psat0ss5398g0080 Pisum sativum HOM05D001593 ORTHO05D002007 2.0e-06 56.2 118 33.1
Gohir.D03G052400 Gossypium hirsutum HOM05D001593 ORTHO05D002007 2.7e-06 55.8 118 25.4
PGR004G1553 Punica granatum HOM05D001593 ORTHO05D002007 2.7e-06 55.8 115 28.7
Gorai.003G054200 Gossypium raimondii HOM05D001593 ORTHO05D002007 3.5e-06 55.5 118 24.6
Nitab4.5_0000045g0530 Nicotiana tabacum HOM05D005604 ORTHO05D006745 3.5e-06 55.5 117 27.4
QL09p023063 Quercus lobata HOM05D001593 ORTHO05D002007 3.5e-06 55.5 114 30.7
SalBow2G0136 Salvia bowleyana HOM05D001593 ORTHO05D002007 3.5e-06 55.5 121 28.9
Sed0003698 Sechium edule HOM05D001593 ORTHO05D002007 3.5e-06 55.5 115 28.7
Actinidia33613 Actinidia chinensis HOM05D001593 ORTHO05D002007 4.5e-06 55.1 90 33.3
CSS0033929 Camellia sinensis var. sinensis HOM05D001593 ORTHO05D002007 4.5e-06 55.1 116 29.3
Cc00_g26360 Coffea canephora HOM05D001593 ORTHO05D002007 4.5e-06 55.1 118 33.1
Gohir.A02G141800 Gossypium hirsutum HOM05D001593 ORTHO05D002007 4.5e-06 55.1 118 24.6
Gohir.D03G052300 Gossypium hirsutum HOM05D001593 ORTHO05D002007 4.5e-06 55.1 118 24.6
Gohir.D03G052700 Gossypium hirsutum HOM05D001593 ORTHO05D002007 4.5e-06 55.1 118 24.6
Gorai.003G054400 Gossypium raimondii HOM05D001593 ORTHO05D002007 4.5e-06 55.1 118 24.6
TPR.G8406 Trifolium pratense HOM05D001593 ORTHO05D002007 4.5e-06 55.1 117 27.4
CSS0017776 Camellia sinensis var. sinensis HOM05D001593 ORTHO05D002007 5.9e-06 54.7 116 29.3
Gohir.D11G318500 Gossypium hirsutum HOM05D001593 ORTHO05D002007 5.9e-06 54.7 123 25.2
Nn1g00166 Nelumbo nucifera HOM05D001593 ORTHO05D002007 5.9e-06 54.7 96 29.2
Nitab4.5_0003317g0030 Nicotiana tabacum HOM05D005604 ORTHO05D006745 5.9e-06 54.7 117 27.4
PSO210G0118 Papaver somniferum HOM05D001593 ORTHO05D002007 5.9e-06 54.7 116 33.6
PSO732G0696 Papaver somniferum HOM05D001593 ORTHO05D002007 5.9e-06 54.7 95 30.5
PGR102G1865 Punica granatum HOM05D001593 ORTHO05D002007 5.9e-06 54.7 114 26.3
TAR629G0649 Trochodendron aralioides HOM05D001593 ORTHO05D002007 5.9e-06 54.7 118 25.4
CAN.G869.19 Capsicum annuum HOM05D001593 ORTHO05D002007 7.7e-06 54.3 91 33.0
Lj1g0022825 Lotus japonicus HOM05D001593 ORTHO05D002007 7.7e-06 54.3 116 31.9
Peaxi162Scf00372g00127 Petunia axillaris HOM05D001593 ORTHO05D002007 7.7e-06 54.3 91 34.1


User provided reference genes

Program Settings