Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2526 Ceratophyllum demersum HOM05D003993 ORTHO05D005336 4.5e-62 241.1 124 100.0
Gohir.A01G074400 Gossypium hirsutum HOM05D003993 ORTHO05D005336 8.8e-42 173.7 97 93.8
Cc05_g13220 Coffea canephora HOM05D003993 ORTHO05D005336 1.5e-41 172.9 97 92.8
CSS0003157 Camellia sinensis var. sinensis HOM05D003993 ORTHO05D005336 2.0e-41 172.6 97 91.8
CSS0014856 Camellia sinensis var. sinensis HOM05D003993 ORTHO05D005336 2.0e-41 172.6 97 91.8
Lj3g0021702 Lotus japonicus HOM05D003993 ORTHO05D005336 2.0e-41 172.6 95 92.6
MD11G1227200 Malus domestica HOM05D003993 ORTHO05D005336 2.0e-41 172.6 97 92.8
MD03G1211800 Malus domestica HOM05D003993 ORTHO05D005336 2.5e-41 172.2 97 92.8
Actinidia09963 Actinidia chinensis HOM05D003993 ORTHO05D005336 3.3e-41 171.8 98 89.8
SGA_v2.0_scaffold320G48573 Striga asiatica HOM05D003993 ORTHO05D005336 4.3e-41 171.4 97 90.7
CiPaw.11G183500 Carya illinoinensis HOM05D003993 ORTHO05D005336 5.7e-41 171.0 99 87.9
Nn1g03663 Nelumbo nucifera HOM05D003993 ORTHO05D005336 5.7e-41 171.0 98 88.8
ClCG10G005790 Citrullus lanatus HOM05D003993 ORTHO05D005336 7.4e-41 170.6 98 87.8
MELO3C025431.2 Cucumis melo HOM05D003993 ORTHO05D005336 7.4e-41 170.6 98 87.8
Duzib213G0987 Durio zibethinus HOM05D003993 ORTHO05D005336 7.4e-41 170.6 97 91.8
Nitab4.5_0000397g0110 Nicotiana tabacum HOM05D003993 ORTHO05D005336 7.4e-41 170.6 97 91.8
Nitab4.5_0009192g0040 Nicotiana tabacum HOM05D003993 ORTHO05D005336 7.4e-41 170.6 97 91.8
Thecc.07G054200 Theobroma cacao HOM05D003993 ORTHO05D005336 9.7e-41 170.2 97 90.7
COL.COLO4_09564 Corchorus olitorius HOM05D003993 ORTHO05D005336 1.3e-40 169.9 97 90.7
Dinv22306 Davidia involucrata HOM05D003993 ORTHO05D005336 1.3e-40 169.9 97 89.7
Migut.H01858 Erythranthe guttata HOM05D003993 ORTHO05D005336 1.3e-40 169.9 97 90.7
TAR626G1606 Trochodendron aralioides HOM05D003993 ORTHO05D005336 1.3e-40 169.9 97 90.7
vmacro11768 Vaccinium macrocarpon HOM05D003993 ORTHO05D005336 1.3e-40 169.9 98 88.8
Cpa.g.sc97.71 Carica papaya HOM05D003993 ORTHO05D005336 1.7e-40 169.5 95 91.6
CsaV3_3G005470 Cucumis sativus L. HOM05D003993 ORTHO05D005336 1.7e-40 169.5 98 86.7
Gorai.002G082300 Gossypium raimondii HOM05D003993 ORTHO05D005336 2.2e-40 169.1 97 91.8
Psat7g122440 Pisum sativum HOM05D003993 ORTHO05D005336 2.2e-40 169.1 95 89.5
Sed0012816 Sechium edule HOM05D003993 ORTHO05D005336 2.2e-40 169.1 101 85.1
Gohir.D01G060900 Gossypium hirsutum HOM05D003993 ORTHO05D005336 2.8e-40 168.7 97 91.8
PSO541G2178 Papaver somniferum HOM05D003993 ORTHO05D005336 2.8e-40 168.7 97 89.7
EL10Ac4g07982 Beta vulgaris HOM05D003993 ORTHO05D005336 3.7e-40 168.3 97 87.6
Duzib170G0292 Durio zibethinus HOM05D003993 ORTHO05D005336 3.7e-40 168.3 97 90.7
TAR624G0674 Trochodendron aralioides HOM05D003993 ORTHO05D005336 3.7e-40 168.3 95 91.6
Nn1g06997 Nelumbo nucifera HOM05D003993 ORTHO05D005336 6.3e-40 167.5 95 90.5
PSO675G0751 Papaver somniferum HOM05D003993 ORTHO05D005336 6.3e-40 167.5 97 89.7
arahy.Tifrunner.gnm1.ann1.M0TH05 Arachis hypogaea HOM05D003993 ORTHO05D005336 8.2e-40 167.2 95 90.5
Glyma.12G214500 Glycine max HOM05D003993 ORTHO05D005336 8.2e-40 167.2 97 88.7
Solyc07g064080.4 Solanum lycopersicum HOM05D003993 ORTHO05D005336 8.2e-40 167.2 97 89.7
GSVIVG01014604001 Vitis vinifera HOM05D003993 ORTHO05D005336 8.2e-40 167.2 97 88.7
Ca_01754_v3 Cicer arietinum L. HOM05D003993 ORTHO05D005336 1.1e-39 166.8 97 87.6
Prupe.4G202100 Prunus persica HOM05D003993 ORTHO05D005336 1.1e-39 166.8 97 89.7
TWI39G1096 Tripterygium wilfordii HOM05D003993 ORTHO05D005336 1.4e-39 166.4 97 88.7
Aqoxy4G02086 Aquilegia oxysepala HOM05D003993 ORTHO05D005336 1.8e-39 166.0 97 85.6
Phvul.005G091400 Phaseolus vulgaris HOM05D003993 ORTHO05D005336 1.8e-39 166.0 97 88.7
Sopen07g032220 Solanum pennellii HOM05D003993 ORTHO05D005336 1.8e-39 166.0 97 88.7
HanXRQChr11g0332991 Helianthus annuus HOM05D003993 ORTHO05D005336 2.4e-39 165.6 97 87.6
VMungo1080G1710 Vigna mungo HOM05D003993 ORTHO05D005336 2.4e-39 165.6 97 88.7
CANSAT11G1844 Cannabis sativa HOM05D003993 ORTHO05D005336 3.1e-39 165.2 98 87.8
DCAR_010016 Daucus carota HOM05D003993 ORTHO05D005336 3.1e-39 165.2 97 86.6
Glyma.13G287100 Glycine max HOM05D003993 ORTHO05D005336 3.1e-39 165.2 97 87.6
Lsat_1_v5_gn_7_108360 Lactuca sativa HOM05D003993 ORTHO05D005336 3.1e-39 165.2 97 86.6
Lalb_Chr14g0366101 Lupinus albus HOM05D003993 ORTHO05D005336 3.1e-39 165.2 97 87.6
Cfa020417 Carpinus fangiana HOM05D003993 ORTHO05D005336 4.1e-39 164.9 95 89.5
Haze_09608 Corylus avellana HOM05D003993 ORTHO05D005336 4.1e-39 164.9 95 89.5
AUR62015640 Chenopodium quinoa HOM05D003993 ORTHO05D005336 5.3e-39 164.5 95 87.4
THA.LOC104817894 Tarenaya hassleriana HOM05D003993 ORTHO05D005336 5.3e-39 164.5 99 84.8
TWI38G0109 Tripterygium wilfordii HOM05D003993 ORTHO05D005336 5.3e-39 164.5 97 87.6
ECA236G0263 Erigeron canadensis HOM05D003993 ORTHO05D005336 6.9e-39 164.1 97 85.6
FvH4_3g21780 Fragaria vesca HOM05D003993 ORTHO05D005336 9.1e-39 163.7 97 86.6
FAN11G2565 Fragaria x ananassa HOM05D003993 ORTHO05D005336 9.1e-39 163.7 97 86.6
FAN16G1112 Fragaria x ananassa HOM05D003993 ORTHO05D005336 9.1e-39 163.7 97 86.6
Oeu032440.1 Olea europaea HOM05D003993 ORTHO05D005336 9.1e-39 163.7 97 86.6
unitig_26.g9969 Utricularia gibba HOM05D003993 ORTHO05D005336 9.1e-39 163.7 97 84.5
Eucgr.F03424 Eucalyptus grandis HOM05D003993 ORTHO05D005336 1.2e-38 163.3 97 86.6
AT3G20720 Arabidopsis thaliana HOM05D003993 ORTHO05D005336 1.5e-38 162.9 98 84.7
BcaB04g20636 Brassica carinata HOM05D003993 ORTHO05D005336 1.5e-38 162.9 98 84.7
BcaC09g49013 Brassica carinata HOM05D003993 ORTHO05D005336 1.5e-38 162.9 98 84.7
A01p34110 Brassica napus HOM05D003993 ORTHO05D005336 1.5e-38 162.9 98 84.7
C01p43520 Brassica napus HOM05D003993 ORTHO05D005336 1.5e-38 162.9 98 84.7
BolC1t04312H Brassica oleracea HOM05D003993 ORTHO05D005336 1.5e-38 162.9 98 84.7
BraA01t03515Z Brassica rapa HOM05D003993 ORTHO05D005336 1.5e-38 162.9 98 84.7
Lj3g0011163 Lotus japonicus HOM05D003993 ORTHO05D005336 1.5e-38 162.9 97 85.6
PGR031G1242 Punica granatum HOM05D003993 ORTHO05D005336 1.5e-38 162.9 98 88.8
AL3G34640 Arabidopsis lyrata HOM05D003993 ORTHO05D005336 2.0e-38 162.5 98 83.7
Carub.0003s2068 Capsella rubella HOM05D003993 ORTHO05D005336 2.0e-38 162.5 98 83.7
Aa31LG8G7470 Aethionema arabicum HOM05D003993 ORTHO05D005336 2.6e-38 162.2 98 84.7
arahy.Tifrunner.gnm1.ann1.C7DQ5B Arachis hypogaea HOM05D003993 ORTHO05D005336 2.6e-38 162.2 97 84.5
arahy.Tifrunner.gnm1.ann1.YETR49 Arachis hypogaea HOM05D003993 ORTHO05D005336 2.6e-38 162.2 97 84.5
FAN25G1663 Fragaria x ananassa HOM05D003993 ORTHO05D005336 2.6e-38 162.2 97 85.6
Sp3g18740 Schrenkiella parvula HOM05D003993 ORTHO05D005336 2.6e-38 162.2 98 82.7
CARHR096540 Cardamine hirsuta HOM05D003993 ORTHO05D005336 4.5e-38 161.4 98 82.7
FAN21G3569 Fragaria x ananassa HOM05D003993 ORTHO05D005336 5.9e-38 161.0 97 85.6
Potri.011G132800 Populus trichocarpa HOM05D003993 ORTHO05D005336 5.9e-38 161.0 97 83.5
QL08p013350 Quercus lobata HOM05D003993 ORTHO05D005336 5.9e-38 161.0 98 85.7
SEGI_25073 Sequoiadendron giganteum HOM05D003993 ORTHO05D005336 7.7e-38 160.6 100 83.0
Ciclev10007272m.g Citrus clementina HOM05D003993 ORTHO05D005336 1.3e-37 159.8 98 84.7
ATR0073G006 Amborella trichopoda HOM05D003993 ORTHO05D005336 1.7e-37 159.5 98 82.7
Manes.15G076600 Manihot esculenta HOM05D003993 ORTHO05D005336 1.7e-37 159.5 97 83.5
Peaxi162Scf01086g00149 Petunia axillaris HOM05D003993 ORTHO05D005336 1.7e-37 159.5 91 90.1
TPR.G36724 Trifolium pratense HOM05D003993 ORTHO05D005336 2.2e-37 159.1 97 83.5
Medtr2g082910 Medicago truncatula HOM05D003993 ORTHO05D005336 2.9e-37 158.7 97 84.5
HPP92_011131 Vanilla planifolia HOM05D003993 ORTHO05D005336 2.9e-37 158.7 97 85.6
Psat5g251760 Pisum sativum HOM05D003993 ORTHO05D005336 3.8e-37 158.3 97 84.5
Sabra11G0119600 Salix brachista HOM05D003993 ORTHO05D005336 3.8e-37 158.3 97 82.5
Lalb_Chr19g0134741 Lupinus albus HOM05D003993 ORTHO05D005336 8.5e-37 157.1 98 83.7
Potri.001G417200 Populus trichocarpa HOM05D003993 ORTHO05D005336 8.5e-37 157.1 97 83.5
SalBow7G3755 Salvia bowleyana HOM05D003993 ORTHO05D005336 8.5e-37 157.1 105 81.0
Glyma.12G135700 Glycine max HOM05D003993 ORTHO05D005336 1.1e-36 156.8 95 83.2
Gohir.D05G365000 Gossypium hirsutum HOM05D003993 ORTHO05D005336 1.1e-36 156.8 97 82.5
Gorai.009G427300 Gossypium raimondii HOM05D003993 ORTHO05D005336 1.1e-36 156.8 97 82.5
Lj8C165T11 Lonicera japonica HOM05D003993 ORTHO05D005336 1.9e-36 156.0 115 74.8
HanXRQChr08g0234101 Helianthus annuus HOM05D003993 ORTHO05D005336 2.5e-36 155.6 97 82.5
Atru.chr2.3206 Acer truncatum HOM05D003993 ORTHO05D005336 1.2e-35 153.3 95 81.1
Os04g0628600 Oryza sativa ssp. japonica HOM05D003993 ORTHO05D005336 3.6e-35 151.8 97 80.4
RcHm_v2.0_Chr5g0037331 Rosa chinensis HOM05D003993 ORTHO05D005336 6.1e-35 151.0 98 80.6
arahy.Tifrunner.gnm1.ann1.9VYU83 Arachis hypogaea HOM05D003993 ORTHO05D005336 1.8e-34 149.4 107 78.5
SHI50190 Sapria himalayana HOM05D003993 ORTHO05D005336 9.7e-33 143.7 108 71.3
PGSC0003DMG401019261 Solanum tuberosum HOM05D003993 ORTHO05D005336 1.1e-31 140.2 97 75.3
SMO143G0035 Selaginella moellendorffii HOM05D003993 ORTHO05D005336 1.6e-30 136.3 97 70.1
HanXRQChr17g0562031 Helianthus annuus HOM05D003993 ORTHO05D005336 4.5e-30 134.8 97 73.2
Mapoly0007s0002 Marchantia polymorpha HOM05D003993 ORTHO05D005336 2.2e-29 132.5 94 69.1
Pp3c10_1850 Physcomitrium patens HOM05D003993 ORTHO05D005336 1.9e-28 129.4 92 68.5
MBI18_g40553_MAGBIO Magnolia biondii HOM05D003993 ORTHO05D005336 4.0e-26 121.7 68 89.7
CBR_g39891 Chara braunii HOM05D003993 ORTHO05D005336 6.7e-26 120.9 93 68.8
Pp3c15_5100 Physcomitrium patens HOM05D003993 ORTHO05D005336 1.7e-24 116.3 100 54.0
Ah.06g183050 Amaranthus hybridus HOM05D003993 ORTHO05D005336 3.7e-24 115.2 66 84.8
VMungo1127G0084 Vigna mungo HOM05D003993 ORTHO05D005336 9.1e-23 110.5 66 80.3
CAN.G337.149 Capsicum annuum HOM05D003993 ORTHO05D005336 9.4e-20 100.5 60 86.7
AagrBONN_evm.TU.Sc2ySwM_344.1679 Anthoceros agrestis HOM05D003993 ORTHO05D005336 2.0e-17 92.8 72 65.3
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 7.0e-15 84.3 63 68.3
Thhalv10019934m.g Eutrema salsugineum HOM05D003993 ORTHO05D005336 2.2e-13 79.3 50 78.0


User provided reference genes

Program Settings