Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2517 Ceratophyllum demersum HOM05D003238 ORTHO05D003571 4.1e-82 308.9 291 100.0
FvH4_1g07820 Fragaria vesca HOM05D003238 ORTHO05D003571 1.8e-16 90.9 155 44.5
FAN19G2918 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.8e-16 90.9 155 44.5
Nn6g35523 Nelumbo nucifera HOM05D003238 ORTHO05D003571 1.8e-16 90.9 150 63.3
FAN23G0786 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.5e-15 87.0 155 45.2
FAN26G0800 Fragaria x ananassa HOM05D003238 ORTHO05D003571 2.5e-15 87.0 155 43.2
QL02p062228 Quercus lobata HOM05D003238 ORTHO05D003571 9.6e-15 85.1 161 46.0
FAN26G1453 Fragaria x ananassa HOM05D003238 ORTHO05D003571 1.6e-14 84.3 155 41.3
TWI32G0644 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 1.6e-14 84.3 159 55.3
RcHm_v2.0_Chr2g0093691 Rosa chinensis HOM05D003238 ORTHO05D003571 2.8e-14 83.6 159 41.5
Nitab4.5_0002824g0070 Nicotiana tabacum HOM05D003238 ORTHO05D003571 6.2e-14 82.4 156 46.2
Cfa003064 Carpinus fangiana HOM05D003238 ORTHO05D003571 8.1e-14 82.0 164 45.7
FAN28G2679 Fragaria x ananassa HOM05D003238 ORTHO05D003571 8.1e-14 82.0 155 42.6
Dinv36782 Davidia involucrata HOM05D003238 ORTHO05D003571 1.8e-13 80.9 164 47.6
MD15G1209800 Malus domestica HOM05D003238 ORTHO05D003571 1.8e-13 80.9 176 42.6
Haze_25933 Corylus avellana HOM05D003238 ORTHO05D003571 3.1e-13 80.1 158 47.5
Peaxi162Scf00498g00436 Petunia axillaris HOM05D003238 ORTHO05D003571 5.3e-13 79.3 145 46.2
TAR624G1148 Trochodendron aralioides HOM05D003238 ORTHO05D003571 9.0e-13 78.6 92 65.2
TWI63G0468 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 1.2e-12 78.2 161 44.7
Dinv37898 Davidia involucrata HOM05D003238 ORTHO05D003571 4.5e-12 76.3 89 66.3
MD02G1082200 Malus domestica HOM05D003238 ORTHO05D003571 5.8e-12 75.9 176 40.3
Solyc12g008950.2 Solanum lycopersicum HOM05D003238 ORTHO05D003571 5.8e-12 75.9 152 46.1
Rhsim05G0017200 Rhododendron simsii HOM05D003238 ORTHO05D003571 1.3e-11 74.7 176 42.0
CiPaw.03G213000 Carya illinoinensis HOM05D003238 ORTHO05D003571 1.7e-11 74.3 158 43.0
Actinidia25242 Actinidia chinensis HOM05D003238 ORTHO05D003571 2.2e-11 73.9 154 35.1
vmacro17137 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 4.9e-11 72.8 157 44.6
Sopen12g003880 Solanum pennellii HOM05D003238 ORTHO05D003571 1.1e-10 71.6 152 42.1
Ca_26161_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 1.4e-10 71.2 149 36.9
Prupe.7G206700 Prunus persica HOM05D003238 ORTHO05D003571 1.4e-10 71.2 176 42.6
PGSC0003DMG400000275 Solanum tuberosum HOM05D003238 ORTHO05D003571 1.4e-10 71.2 165 43.0
Cfa003563 Carpinus fangiana HOM05D003238 ORTHO05D003571 1.9e-10 70.9 96 61.5
GSVIVG01015179001 Vitis vinifera HOM05D003238 ORTHO05D003571 2.5e-10 70.5 147 46.3
Haze_15983 Corylus avellana HOM05D003238 ORTHO05D003571 3.2e-10 70.1 86 66.3
MSTRG.6003 Avicennia marina HOM05D003238 ORTHO05D003571 4.2e-10 69.7 160 43.1
Duzib168G0217 Durio zibethinus HOM05D003238 ORTHO05D003571 5.5e-10 69.3 80 68.8
Hma1.2p1_0169F.1_g074900 Hydrangea macrophylla HOM05D003238 ORTHO05D003571 5.5e-10 69.3 155 44.5
Actinidia39103 Actinidia chinensis HOM05D003238 ORTHO05D003571 7.1e-10 68.9 89 62.9
Medtr2g039890 Medicago truncatula HOM05D003238 ORTHO05D003571 7.1e-10 68.9 146 45.2
arahy.Tifrunner.gnm1.ann1.57GLQM Arachis hypogaea HOM05D003238 ORTHO05D003571 1.2e-09 68.2 164 32.3
CANSAT56G1439 Cannabis sativa HOM05D003238 ORTHO05D003571 1.6e-09 67.8 60 58.3
CiPaw.01G223100 Carya illinoinensis HOM05D003238 ORTHO05D003571 1.6e-09 67.8 96 61.5
Gorai.001G012800 Gossypium raimondii HOM05D003238 ORTHO05D003571 1.6e-09 67.8 90 64.4
MBI04_g36912_MAGBIO Magnolia biondii HOM05D003238 ORTHO05D003571 2.1e-09 67.4 86 61.6
Psat1g140480 Pisum sativum HOM05D003238 ORTHO05D003571 2.1e-09 67.4 139 43.2
Gohir.D07G012200 Gossypium hirsutum HOM05D001717 ORTHO05D007217 2.7e-09 67.0 87 65.5
Lj4C292G2 Lonicera japonica HOM05D003238 ORTHO05D003571 2.7e-09 67.0 155 44.5
COL.COLO4_30681 Corchorus olitorius HOM05D003238 ORTHO05D003571 3.5e-09 66.6 91 58.2
Lj3g0007714 Lotus japonicus HOM05D003238 ORTHO05D003571 6.0e-09 65.9 94 58.5
QL05p009982 Quercus lobata HOM05D003238 ORTHO05D003571 6.0e-09 65.9 53 62.3
Rhsim08G0235200 Rhododendron simsii HOM05D003238 ORTHO05D003571 7.9e-09 65.5 63 55.6
Manes.16G100500 Manihot esculenta HOM05D003238 ORTHO05D003571 1.0e-08 65.1 93 59.1
Actinidia39710 Actinidia chinensis HOM05D003238 ORTHO05D003571 1.3e-08 64.7 89 60.7
Phvul.010G137200 Phaseolus vulgaris HOM05D003238 ORTHO05D003571 1.8e-08 64.3 84 60.7
SGA_v2.0_scaffold10G05235 Striga asiatica HOM05D002348 ORTHO05D002512 1.8e-08 64.3 165 42.4
HPP92_007657 Vanilla planifolia HOM05D003238 ORTHO05D003571 1.8e-08 64.3 98 53.1
ATR0789G083 Amborella trichopoda HOM05D003238 ORTHO05D003571 2.3e-08 63.9 95 60.0
Thecc.09G086100 Theobroma cacao HOM05D003238 ORTHO05D003571 2.3e-08 63.9 79 65.8
Potri.006G148000 Populus trichocarpa HOM05D003238 ORTHO05D003571 3.0e-08 63.5 78 67.9
TPR.G13426 Trifolium pratense HOM05D003238 ORTHO05D003571 3.0e-08 63.5 147 45.6
Cpa.g.sc25.72 Carica papaya HOM05D003238 ORTHO05D003571 3.9e-08 63.2 48 68.8
Lalb_Chr04g0263271 Lupinus albus HOM05D003238 ORTHO05D003571 3.9e-08 63.2 94 58.5
Duzib160G0096 Durio zibethinus HOM05D003238 ORTHO05D003571 5.1e-08 62.8 91 58.2
Psat4g187480 Pisum sativum HOM05D003238 ORTHO05D003571 5.1e-08 62.8 91 56.0
Thecc.06G114200 Theobroma cacao HOM05D003238 ORTHO05D003571 5.1e-08 62.8 79 65.8
PGR102G1556 Punica granatum HOM05D003238 ORTHO05D003571 8.7e-08 62.0 81 60.5
Lsat_1_v5_gn_8_86760 Lactuca sativa HOM05D003238 ORTHO05D003571 1.1e-07 61.6 170 30.6
AT1G72690 Arabidopsis thaliana HOM05D003238 ORTHO05D003571 1.5e-07 61.2 57 54.4
Ciclev10026836m.g Citrus clementina HOM05D003238 ORTHO05D003571 1.5e-07 61.2 63 54.0
arahy.Tifrunner.gnm1.ann1.7T9QNI Arachis hypogaea HOM05D003238 ORTHO05D003571 2.5e-07 60.5 89 59.6
Glyma.07G008200 Glycine max HOM05D003238 ORTHO05D003571 2.5e-07 60.5 87 60.9
Glyma.08G191200 Glycine max HOM05D003238 ORTHO05D003571 2.5e-07 60.5 87 60.9
HanXRQChr06g0178591 Helianthus annuus HOM05D003238 ORTHO05D003571 2.5e-07 60.5 152 30.9
Medtr8g017610 Medicago truncatula HOM05D003238 ORTHO05D003571 2.5e-07 60.5 60 51.7
TWI79G0340 Tripterygium wilfordii HOM05D003238 ORTHO05D003571 3.3e-07 60.1 91 54.9
arahy.Tifrunner.gnm1.ann1.HS5001 Arachis hypogaea HOM05D003238 ORTHO05D003571 4.3e-07 59.7 88 58.0
CsaV3_7G034700 Cucumis sativus L. HOM05D003238 ORTHO05D003571 4.3e-07 59.7 63 50.8
Nitab4.5_0000255g0290 Nicotiana tabacum HOM05D003238 ORTHO05D003571 4.3e-07 59.7 48 62.5
Nitab4.5_0005918g0030 Nicotiana tabacum HOM05D003238 ORTHO05D003571 4.3e-07 59.7 48 62.5
GSVIVG01016802001 Vitis vinifera HOM05D003238 ORTHO05D003571 4.3e-07 59.7 93 54.8
Ca_23334_v3 Cicer arietinum L. HOM05D003238 ORTHO05D003571 5.7e-07 59.3 95 51.6
vmacro23045 Vaccinium macrocarpon HOM05D003238 ORTHO05D003571 5.7e-07 59.3 46 63.0
Aqoxy7G04029 Aquilegia oxysepala HOM05D003238 ORTHO05D003571 7.4e-07 58.9 76 65.8
Ciclev10009462m.g Citrus clementina HOM05D003238 ORTHO05D003571 7.4e-07 58.9 109 36.7
Sed0015805 Sechium edule HOM05D003238 ORTHO05D003571 7.4e-07 58.9 63 50.8
CSS0012761 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 9.6e-07 58.5 78 61.5
CSS0032672 Camellia sinensis var. sinensis HOM05D003238 ORTHO05D003571 9.6e-07 58.5 78 61.5
Gohir.A10G058000 Gossypium hirsutum HOM05D003238 ORTHO05D003571 9.6e-07 58.5 79 60.8
Sabra06G0117100 Salix brachista HOM05D003238 ORTHO05D003571 9.6e-07 58.5 94 54.3
BraA10t43522Z Brassica rapa HOM05D003238 ORTHO05D003571 1.3e-06 58.2 98 33.7
Oeu017609.1 Olea europaea HOM05D003238 ORTHO05D003571 1.3e-06 58.2 160 40.0
Eucgr.C00871 Eucalyptus grandis HOM05D003238 ORTHO05D003571 1.6e-06 57.8 153 29.4
Manes.11G024400 Manihot esculenta HOM05D003238 ORTHO05D003571 1.6e-06 57.8 95 53.7
MELO3C024380.2 Cucumis melo HOM05D003238 ORTHO05D003571 2.1e-06 57.4 63 49.2
Nitab4.5_0006462g0010 Nicotiana tabacum HOM05D003238 ORTHO05D003571 2.1e-06 57.4 48 60.4
Potri.017G119600 Populus trichocarpa HOM05D003238 ORTHO05D003571 2.1e-06 57.4 53 56.6
HPP92_005498 Vanilla planifolia HOM05D003238 ORTHO05D003571 2.8e-06 57.0 50 56.0
DCAR_026391 Daucus carota HOM05D003238 ORTHO05D003571 3.7e-06 56.6 50 54.0
Gohir.D10G059800 Gossypium hirsutum HOM05D003238 ORTHO05D003571 3.7e-06 56.6 79 59.5
Gorai.011G063800 Gossypium raimondii HOM05D003238 ORTHO05D003571 3.7e-06 56.6 79 59.5
arahy.Tifrunner.gnm1.ann1.ZSY109 Arachis hypogaea HOM05D003238 ORTHO05D003571 4.8e-06 56.2 160 30.0
PSO210G1081 Papaver somniferum HOM05D003238 ORTHO05D003571 4.8e-06 56.2 91 58.2
TPR.G27679 Trifolium pratense HOM05D003238 ORTHO05D003571 4.8e-06 56.2 94 51.1
CARHR065610 Cardamine hirsuta HOM05D003238 ORTHO05D003571 6.2e-06 55.8 50 54.0
Glyma.15G170900 Glycine max HOM05D003238 ORTHO05D003571 6.2e-06 55.8 81 40.7
THA.LOC109116473 Tarenaya hassleriana HOM05D003238 ORTHO05D003571 6.2e-06 55.8 55 50.9
ClCG09G000780 Citrullus lanatus HOM05D003238 ORTHO05D003571 8.2e-06 55.5 48 54.2


User provided reference genes

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