Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2513 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 3.4e-138 495.0 246 100.0
CDE11G0633 Ceratophyllum demersum HOM05D002674 ORTHO05D007700 1.4e-123 446.4 246 90.2
Aqoxy5G00752 Aquilegia oxysepala HOM05D002674 ORTHO05D007700 1.5e-61 240.4 289 51.6
MBI19_g25354_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D007700 2.0e-61 240.0 284 50.7
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.9e-60 236.1 281 50.9
Atru.chr5.1151 Acer truncatum HOM05D002674 ORTHO05D007700 5.4e-59 231.9 265 52.8
ClCG10G010900 Citrullus lanatus HOM05D002674 ORTHO05D007700 1.6e-58 230.3 268 53.0
CsaV3_4G000780 Cucumis sativus L. HOM05D002674 ORTHO05D007700 2.7e-58 229.6 269 52.0
COL.COLO4_23350 Corchorus olitorius HOM05D002674 ORTHO05D007700 3.5e-58 229.2 272 52.6
FAN27G2781 Fragaria x ananassa HOM05D002674 ORTHO05D007700 3.5e-58 229.2 266 51.5
MELO3C017958.2 Cucumis melo HOM05D002674 ORTHO05D007700 4.6e-58 228.8 269 52.0
Thecc.01G299900 Theobroma cacao HOM05D002674 ORTHO05D007700 3.9e-57 225.7 275 53.5
TAR365G1234 Trochodendron aralioides HOM05D002674 ORTHO05D007700 6.6e-57 224.9 270 52.2
TAR636G1278 Trochodendron aralioides HOM05D002674 ORTHO05D007700 1.9e-56 223.4 270 51.1
MD03G1287800 Malus domestica HOM05D002674 ORTHO05D007700 2.5e-56 223.0 276 49.3
HPP92_025205 Vanilla planifolia HOM05D002674 ORTHO05D007700 2.5e-56 223.0 261 54.0
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 2.1e-55 219.9 274 51.8
Prupe.8G261000 Prunus persica HOM05D002674 ORTHO05D007700 2.1e-55 219.9 280 48.9
CiPaw.07G108400 Carya illinoinensis HOM05D002674 ORTHO05D007700 1.0e-54 217.6 262 50.4
Duzib138G1545 Durio zibethinus HOM05D002674 ORTHO05D007700 1.0e-54 217.6 273 51.6
MD11G1310500 Malus domestica HOM05D002674 ORTHO05D007700 4.0e-54 215.7 279 50.2
Actinidia24347 Actinidia chinensis HOM05D002674 ORTHO05D007700 8.9e-54 214.5 265 52.5
Psat6g166040 Pisum sativum HOM05D002674 ORTHO05D007700 8.9e-54 214.5 261 51.3
TWI23G1032 Tripterygium wilfordii HOM05D002674 ORTHO05D007700 1.2e-53 214.2 267 50.2
Glyma.02G018300 Glycine max HOM05D002674 ORTHO05D007700 1.5e-53 213.8 260 52.3
Ciclev10021537m.g Citrus clementina HOM05D002674 ORTHO05D007700 2.6e-53 213.0 276 50.4
Gorai.004G089800 Gossypium raimondii HOM05D002674 ORTHO05D007700 1.7e-52 210.3 273 50.5
Lj1A25T5 Lonicera japonica HOM05D002674 ORTHO05D007700 1.7e-52 210.3 275 52.0
Gohir.D08G085300 Gossypium hirsutum HOM05D002674 ORTHO05D007700 3.7e-52 209.1 273 50.2
Phvul.007G146100 Phaseolus vulgaris HOM05D002674 ORTHO05D007700 4.9e-52 208.8 260 51.2
CANSAT25G1821 Cannabis sativa HOM05D002674 ORTHO05D007700 1.1e-51 207.6 275 46.5
Potri.002G204700 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.1e-51 207.6 268 51.5
Gohir.A08G075900 Gossypium hirsutum HOM05D002674 ORTHO05D007700 1.4e-51 207.2 273 49.5
Potri.014G129500 Populus trichocarpa HOM05D002674 ORTHO05D007700 1.4e-51 207.2 260 51.9
Sabra14G0096100 Salix brachista HOM05D002674 ORTHO05D007700 3.2e-51 206.1 266 50.8
Sopen06g003880 Solanum pennellii HOM05D002674 ORTHO05D007700 9.2e-51 204.5 276 50.4
QL12p028514 Quercus lobata HOM05D002674 ORTHO05D007700 1.2e-50 204.1 302 45.7
PSO832G4034 Papaver somniferum HOM05D002674 ORTHO05D007700 2.0e-50 203.4 277 51.6
PGSC0003DMG402017938 Solanum tuberosum HOM05D002674 ORTHO05D007700 2.7e-50 203.0 276 49.6
Lj5g0010238 Lotus japonicus HOM05D002674 ORTHO05D007700 3.5e-50 202.6 263 52.9
Solyc06g009120.3 Solanum lycopersicum HOM05D002674 ORTHO05D007700 4.6e-50 202.2 276 50.0
Eucgr.K03478 Eucalyptus grandis HOM05D002674 ORTHO05D007700 3.0e-49 199.5 279 45.5
Glyma.10G018600 Glycine max HOM05D002674 ORTHO05D007700 6.6e-49 198.4 267 49.4
Sed0013149 Sechium edule HOM05D002674 ORTHO05D007700 2.5e-48 196.4 251 49.0
Medtr1g088580 Medicago truncatula HOM05D002674 ORTHO05D007700 3.3e-48 196.1 263 49.4
Manes.01G218600 Manihot esculenta HOM05D002674 ORTHO05D007700 5.6e-48 195.3 272 47.4
FAN24G1157 Fragaria x ananassa HOM05D002674 ORTHO05D007700 1.2e-47 194.1 272 46.3
Ca_10339_v3 Cicer arietinum L. HOM05D002674 ORTHO05D007700 1.6e-47 193.7 269 48.0
FvH4_2g25690 Fragaria vesca HOM05D002674 ORTHO05D007700 1.6e-47 193.7 272 46.3
Nn3g21481 Nelumbo nucifera HOM05D002674 ORTHO05D007700 1.6e-47 193.7 234 51.7
Nitab4.5_0002470g0100 Nicotiana tabacum HOM05D002674 ORTHO05D007700 1.6e-47 193.7 275 48.4
FAN20G3185 Fragaria x ananassa HOM05D002674 ORTHO05D007700 6.2e-47 191.8 272 46.0
Nitab4.5_0005805g0020 Nicotiana tabacum HOM05D002674 ORTHO05D007700 6.2e-47 191.8 274 49.6
BcaC03g16124 Brassica carinata HOM05D002674 ORTHO05D007700 8.1e-47 191.4 260 50.8
C02p38980 Brassica napus HOM05D002674 ORTHO05D007700 1.8e-46 190.3 260 51.2
FAN15G1012 Fragaria x ananassa HOM05D002674 ORTHO05D007700 4.0e-46 189.1 272 45.6
BolC2t09909H Brassica oleracea HOM05D002674 ORTHO05D007700 8.9e-46 188.0 260 50.8
Rhsim01G0243300 Rhododendron simsii HOM05D002674 ORTHO05D007700 8.9e-46 188.0 292 46.9
A02p24720 Brassica napus HOM05D002674 ORTHO05D007700 1.2e-45 187.6 250 50.8
Sc24g0003790 Simmondsia chinensis HOM05D002674 ORTHO05D007700 1.5e-45 187.2 282 45.4
BraA02t07459Z Brassica rapa HOM05D002674 ORTHO05D007700 3.4e-45 186.0 263 49.8
HanXRQChr10g0284651 Helianthus annuus HOM05D002674 ORTHO05D007700 3.4e-45 186.0 289 45.0
Peaxi162Scf00399g00714 Petunia axillaris HOM05D002674 ORTHO05D007700 3.4e-45 186.0 298 46.6
RcHm_v2.0_Chr6g0293961 Rosa chinensis HOM05D002674 ORTHO05D007700 3.4e-45 186.0 271 44.3
Cc01_g20810 Coffea canephora HOM05D002674 ORTHO05D007700 4.4e-45 185.7 278 46.4
Sabra02G0154700 Salix brachista HOM05D002674 ORTHO05D008110 4.4e-45 185.7 264 48.9
VMungo0720G0138 Vigna mungo HOM05D002674 ORTHO05D007700 5.8e-45 185.3 223 53.4
Thhalv10028893m.g Eutrema salsugineum HOM05D002674 ORTHO05D007700 7.5e-45 184.9 263 50.2
Sp6g02330 Schrenkiella parvula HOM05D002674 ORTHO05D007700 1.3e-44 184.1 266 50.4
CSS0000533 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 2.9e-44 183.0 275 46.2
Cfa005916 Carpinus fangiana HOM05D002674 ORTHO05D007700 4.9e-44 182.2 274 44.9
CSS0049735 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D007700 1.1e-43 181.0 271 46.1
Carub.0006s3472 Capsella rubella HOM05D002674 ORTHO05D007700 2.4e-43 179.9 264 49.2
CARHR250690 Cardamine hirsuta HOM05D002674 ORTHO05D007700 5.4e-43 178.7 277 48.7
SGA_v2.0_scaffold1G00369 Striga asiatica HOM05D002674 ORTHO05D007700 1.2e-42 177.6 258 47.7
TPR.G34010 Trifolium pratense HOM05D002674 ORTHO05D007700 1.2e-42 177.6 267 45.7
THA.LOC104815928 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.6e-42 177.2 271 46.1
Hma1.2p1_0491F.1_g164500 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 4.6e-42 175.6 197 56.3
AT4G02425 Arabidopsis thaliana HOM05D002674 ORTHO05D007700 2.3e-41 173.3 263 47.9
Ah.15g093240 Amaranthus hybridus HOM05D002674 ORTHO05D007700 8.6e-41 171.4 296 44.3
THA.LOC104825970 Tarenaya hassleriana HOM05D002674 ORTHO05D007700 1.1e-40 171.0 279 44.8
Lsat_1_v5_gn_9_5620 Lactuca sativa HOM05D002674 ORTHO05D007700 1.9e-40 170.2 271 45.0
EL10Ac7g17509 Beta vulgaris HOM05D002674 ORTHO05D007700 4.7e-39 165.6 242 47.9
Migut.D00215 Erythranthe guttata HOM05D002674 ORTHO05D007700 2.3e-38 163.3 255 45.5
Lsat_1_v5_gn_7_11800 Lactuca sativa HOM05D002674 ORTHO05D007700 5.2e-38 162.2 247 46.2
arahy.Tifrunner.gnm1.ann1.2P60TQ Arachis hypogaea HOM05D002674 ORTHO05D007700 2.6e-37 159.8 232 46.6
Hund18157 Selenicereus undatus HOM05D002674 ORTHO05D007700 2.6e-37 159.8 283 40.6
BcaB05g23628 Brassica carinata HOM05D002674 ORTHO05D007700 5.8e-37 158.7 177 57.1
ATR0796G100 Amborella trichopoda HOM05D002674 ORTHO05D007700 7.6e-37 158.3 263 43.0
AL6G50650 Arabidopsis lyrata HOM05D002674 ORTHO05D007700 7.6e-37 158.3 224 50.0
Lalb_Chr06g0163511 Lupinus albus HOM05D002674 ORTHO05D007700 7.6e-37 158.3 254 45.7
Carub.0001s0195 Capsella rubella HOM05D002674 ORTHO05D007700 3.8e-36 156.0 264 42.4
HPP92_006921 Vanilla planifolia HOM05D002674 ORTHO05D007700 3.8e-36 156.0 213 47.9
Aa31LG1G9740 Aethionema arabicum HOM05D002674 ORTHO05D007700 6.4e-36 155.2 271 44.3
SEGI_12569 Sequoiadendron giganteum HOM05D002674 ORTHO05D007700 8.4e-36 154.8 342 36.8
arahy.Tifrunner.gnm1.ann1.YN8C8B Arachis hypogaea HOM05D002674 ORTHO05D007700 9.2e-35 151.4 241 44.4
unitig_22.g5241 Utricularia gibba HOM05D002674 ORTHO05D007700 1.0e-33 147.9 223 50.2
vmacro15007 Vaccinium macrocarpon HOM05D002674 ORTHO05D007700 2.3e-33 146.7 245 45.3
DCAR_002828 Daucus carota HOM05D002674 ORTHO05D007700 3.3e-32 142.9 247 45.3
AUR62033139 Chenopodium quinoa HOM05D002674 ORTHO05D007700 2.0e-29 133.7 205 46.3
ECA247G3124 Erigeron canadensis HOM05D002674 ORTHO05D007700 2.6e-29 133.3 256 41.4
Oeu054122.1 Olea europaea HOM05D002674 ORTHO05D007700 5.8e-29 132.1 167 53.3
Aa31LG5G2060 Aethionema arabicum HOM05D002674 ORTHO05D007700 9.9e-29 131.3 243 44.4
AUR62008632 Chenopodium quinoa HOM05D002674 ORTHO05D007700 5.4e-27 125.6 170 50.6
CAN.G1280.1 Capsicum annuum HOM05D002674 ORTHO05D007700 6.6e-25 118.6 267 39.7
Hma1.2p1_0491F.1_g164510 Hydrangea macrophylla HOM05D002674 ORTHO05D007700 1.4e-22 110.9 107 65.4
Os01g0316500 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D007700 2.2e-20 103.6 178 46.1
Oeu053149.1 Olea europaea HOM05D002674 ORTHO05D007700 1.9e-19 100.5 147 51.7
Zm00001eb127170 Zea mays HOM05D002674 ORTHO05D007700 1.2e-18 97.8 239 38.1
Zm00001eb285590 Zea mays HOM05D002674 ORTHO05D007700 1.8e-17 94.0 160 44.4
CANSAT56G3445 Cannabis sativa HOM05D002674 ORTHO05D007700 3.6e-15 86.3 92 52.2
BolC6t36475H Brassica oleracea HOM05D000186 ORTHO05D015008 1.4e-14 84.3 81 56.8
BcaC03g16430 Brassica carinata HOM05D002674 ORTHO05D007700 2.4e-14 83.6 75 58.7
Zm00001eb018450 Zea mays HOM05D002674 ORTHO05D007700 5.5e-11 72.4 195 37.4
BcaB07g32361 Brassica carinata HOM05D002674 ORTHO05D007700 7.1e-11 72.0 81 55.6
C02p62500 Brassica napus HOM05D002674 ORTHO05D007700 5.1e-09 65.9 57 63.2
C05p48610 Brassica napus HOM05D002674 ORTHO05D007700 1.1e-08 64.7 57 61.4
C08p25960 Brassica napus HOM05D002674 ORTHO05D007700 1.1e-08 64.7 57 61.4
BolC9t55650H Brassica oleracea HOM05D002674 ORTHO05D007700 4.3e-08 62.8 57 61.4
BolC1t01853H Brassica oleracea HOM05D002674 ORTHO05D007700 7.4e-08 62.0 57 59.6
A08p09760 Brassica napus HOM05D002674 ORTHO05D007700 3.7e-07 59.7 46 65.2
BraA08t32971Z Brassica rapa HOM05D002674 ORTHO05D007700 3.7e-07 59.7 46 65.2
C09p27860 Brassica napus HOM05D002674 ORTHO05D007700 4.8e-07 59.3 57 59.6
C06p13190 Brassica napus HOM05D002674 ORTHO05D015008 1.4e-06 57.8 39 71.8
A09p66240 Brassica napus HOM05D002674 ORTHO05D007700 2.4e-06 57.0 42 66.7
C02p42550 Brassica napus HOM05D000186 ORTHO05D015008 4.0e-06 56.2 39 69.2
BcaB04g18179 Brassica carinata HOM05D002674 ORTHO05D007700 5.3e-06 55.8 39 69.2
BcaB06g28993 Brassica carinata HOM05D002674 ORTHO05D007700 9.0e-06 55.1 43 65.1


User provided reference genes

Program Settings