Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2500 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 2.8e-143 511.9 257 100.0
CDE11G0339 Ceratophyllum demersum HOM05D006815 ORTHO05D008536 1.0e-89 334.0 191 87.4
Nn2g15741 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.1e-62 244.2 235 53.2
MBI19_g17427_MAGBIO Magnolia biondii HOM05D006815 ORTHO05D008536 4.2e-62 242.3 262 51.9
Dinv24040 Davidia involucrata HOM05D006815 ORTHO05D008536 5.1e-60 235.3 216 55.1
TAR369G0232 Trochodendron aralioides HOM05D006815 ORTHO05D008536 1.5e-59 233.8 217 56.2
Cpa.g.sc9.26 Carica papaya HOM05D006815 ORTHO05D008536 1.3e-58 230.7 227 53.7
Duzib106G1458 Durio zibethinus HOM05D006815 ORTHO05D008536 2.8e-58 229.6 215 53.5
COL.COLO4_29358 Corchorus olitorius HOM05D006815 ORTHO05D008536 1.8e-57 226.9 215 53.0
Atru.chr8.1155 Acer truncatum HOM05D006815 ORTHO05D008536 1.2e-56 224.2 225 51.1
Gohir.D01G124800 Gossypium hirsutum HOM05D006815 ORTHO05D008536 2.6e-56 223.0 221 52.5
Gorai.002G155400 Gossypium raimondii HOM05D006815 ORTHO05D008536 2.6e-56 223.0 221 52.5
ATR0598G218 Amborella trichopoda HOM05D006815 ORTHO05D008536 4.5e-56 222.2 263 48.3
Sabra06G0149300 Salix brachista HOM05D006815 ORTHO05D008536 7.6e-56 221.5 217 51.6
CiPaw.09G028400 Carya illinoinensis HOM05D006815 ORTHO05D008536 2.9e-55 219.5 204 53.4
TWI53G1298 Tripterygium wilfordii HOM05D006815 ORTHO05D008536 3.8e-55 219.2 218 51.4
Gohir.A01G137200 Gossypium hirsutum HOM05D006815 ORTHO05D008536 6.4e-55 218.4 221 52.0
GSVIVG01033467001 Vitis vinifera HOM05D006815 ORTHO05D008536 8.4e-55 218.0 189 57.1
PGSC0003DMG400001108 Solanum tuberosum HOM05D006815 ORTHO05D008536 1.1e-54 217.6 228 49.1
Haze_20020 Corylus avellana HOM05D006815 ORTHO05D008536 1.4e-54 217.2 227 50.2
Haze_20023 Corylus avellana HOM05D006815 ORTHO05D008536 1.4e-54 217.2 227 50.2
Lj2C363G3 Lonicera japonica HOM05D006815 ORTHO05D008536 1.4e-54 217.2 213 52.6
QL07p024496 Quercus lobata HOM05D006815 ORTHO05D008536 2.4e-54 216.5 223 50.7
Thecc.05G174900 Theobroma cacao HOM05D006815 ORTHO05D008536 3.2e-54 216.1 257 46.7
MSTRG.6498 Avicennia marina HOM05D006815 ORTHO05D008536 4.2e-54 215.7 237 48.5
Cfa020143 Carpinus fangiana HOM05D006815 ORTHO05D008536 4.2e-54 215.7 238 49.6
Actinidia22067 Actinidia chinensis HOM05D006815 ORTHO05D008536 7.1e-54 214.9 229 49.3
MD14G1054000 Malus domestica HOM05D006815 ORTHO05D008536 9.3e-54 214.5 202 54.5
Peaxi162Scf00463g00417 Petunia axillaris HOM05D006815 ORTHO05D008536 1.6e-53 213.8 248 47.2
Sopen03g011500 Solanum pennellii HOM05D006815 ORTHO05D008536 1.6e-53 213.8 232 47.4
Eucgr.A02470 Eucalyptus grandis HOM05D006815 ORTHO05D008536 2.1e-53 213.4 232 48.3
PGR004G0977 Punica granatum HOM05D006815 ORTHO05D008536 2.1e-53 213.4 230 48.7
Solyc03g053020.4 Solanum lycopersicum HOM05D006815 ORTHO05D008536 2.1e-53 213.4 250 46.4
SGA_v2.0_scaffold57G20097 Striga asiatica HOM05D006815 ORTHO05D008536 2.7e-53 213.0 254 47.6
CANSAT64G2825 Cannabis sativa HOM05D006815 ORTHO05D008536 4.6e-53 212.2 207 54.1
Aqoxy2G00089 Aquilegia oxysepala HOM05D006815 ORTHO05D008536 7.9e-53 211.5 215 49.8
Potri.006G194600 Populus trichocarpa HOM05D006815 ORTHO05D008536 7.9e-53 211.5 195 53.3
Ciclev10012299m.g Citrus clementina HOM05D006815 ORTHO05D008536 1.0e-52 211.1 242 47.5
CSS0019995 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 1.3e-52 210.7 202 53.5
Cc06_g15510 Coffea canephora HOM05D006815 ORTHO05D008536 1.3e-52 210.7 205 51.2
CAN.G1314.3 Capsicum annuum HOM05D006815 ORTHO05D008536 1.8e-52 210.3 206 50.0
HanXRQChr01g0024541 Helianthus annuus HOM05D006815 ORTHO05D008536 2.3e-52 209.9 232 47.0
CSS0043811 Camellia sinensis var. sinensis HOM05D006815 ORTHO05D008536 3.0e-52 209.5 202 52.5
Oeu035701.1 Olea europaea HOM05D006815 ORTHO05D008536 3.0e-52 209.5 197 53.8
SalBow6G3515 Salvia bowleyana HOM05D006815 ORTHO05D008536 5.1e-52 208.8 252 45.6
Prupe.7G081100 Prunus persica HOM05D006815 ORTHO05D008536 1.5e-51 207.2 197 53.3
Lsat_1_v5_gn_1_60941 Lactuca sativa HOM05D006815 ORTHO05D008536 1.9e-51 206.8 225 48.0
DCAR_013671 Daucus carota HOM05D006815 ORTHO05D008536 2.5e-51 206.5 240 46.7
Manes.08G042600 Manihot esculenta HOM05D006815 ORTHO05D008536 2.5e-51 206.5 221 50.2
AUR62012005 Chenopodium quinoa HOM05D006815 ORTHO05D008536 3.3e-51 206.1 192 55.2
PSO541G3114 Papaver somniferum HOM05D006815 ORTHO05D008536 4.3e-51 205.7 203 53.2
PSO675G7684 Papaver somniferum HOM05D006815 ORTHO05D008536 4.3e-51 205.7 205 52.7
RcHm_v2.0_Chr3g0479231 Rosa chinensis HOM05D006815 ORTHO05D008536 4.3e-51 205.7 196 53.6
AT2G41950 Arabidopsis thaliana HOM05D006815 ORTHO05D008536 5.6e-51 205.3 260 45.4
Thhalv10017089m.g Eutrema salsugineum HOM05D006815 ORTHO05D008536 7.4e-51 204.9 232 46.6
EL10Ac3g06884 Beta vulgaris HOM05D006815 ORTHO05D008536 9.6e-51 204.5 194 52.6
Migut.J01868 Erythranthe guttata HOM05D006815 ORTHO05D008536 9.6e-51 204.5 212 50.5
Nitab4.5_0000009g0210 Nicotiana tabacum HOM05D006815 ORTHO05D008536 1.3e-50 204.1 229 47.6
ClCG10G017680 Citrullus lanatus HOM05D006815 ORTHO05D008536 1.6e-50 203.8 230 48.3
Lalb_Chr15g0079111 Lupinus albus HOM05D006815 ORTHO05D008536 2.1e-50 203.4 205 50.2
THA.LOC104824483 Tarenaya hassleriana HOM05D006815 ORTHO05D008536 2.1e-50 203.4 256 45.7
AL4G40310 Arabidopsis lyrata HOM05D006815 ORTHO05D008536 6.2e-50 201.8 236 46.6
Sp4g24220 Schrenkiella parvula HOM05D006815 ORTHO05D008536 6.2e-50 201.8 247 44.5
Hund19213 Selenicereus undatus HOM05D006815 ORTHO05D008536 6.2e-50 201.8 204 51.0
A05p02650 Brassica napus HOM05D006815 ORTHO05D008536 8.1e-50 201.4 234 45.7
BraA05t19258Z Brassica rapa HOM05D006815 ORTHO05D008536 8.1e-50 201.4 234 45.7
ECA248G0678 Erigeron canadensis HOM05D006815 ORTHO05D008536 8.1e-50 201.4 198 51.0
MELO3C009608.2 Cucumis melo HOM05D006815 ORTHO05D008536 1.1e-49 201.1 247 45.7
Rhsim03G0035800 Rhododendron simsii HOM05D006815 ORTHO05D008536 1.1e-49 201.1 192 53.6
AUR62015334 Chenopodium quinoa HOM05D006815 ORTHO05D008536 1.4e-49 200.7 192 53.6
Carub.0004s2428 Capsella rubella HOM05D006815 ORTHO05D008536 2.4e-49 199.9 241 44.8
FvH4_6g21880 Fragaria vesca HOM05D006815 ORTHO05D008536 3.1e-49 199.5 196 51.5
FAN14G3951 Fragaria x ananassa HOM05D006815 ORTHO05D008536 3.1e-49 199.5 196 51.5
unitig_37.g12377 Utricularia gibba HOM05D006815 ORTHO05D008536 3.1e-49 199.5 230 44.8
arahy.Tifrunner.gnm1.ann1.8HEC25 Arachis hypogaea HOM05D006815 ORTHO05D008536 1.2e-48 197.6 224 47.3
Sed0026757 Sechium edule HOM05D006815 ORTHO05D008536 1.2e-48 197.6 225 47.6
CsaV3_3G038620 Cucumis sativus L. HOM05D006815 ORTHO05D008536 2.6e-48 196.4 205 49.8
BcaC02g12449 Brassica carinata HOM05D006815 ORTHO05D008536 3.4e-48 196.1 259 43.6
C04p03160 Brassica napus HOM05D006815 ORTHO05D008536 3.4e-48 196.1 259 43.6
BolC4t21956H Brassica oleracea HOM05D006815 ORTHO05D008536 3.4e-48 196.1 259 43.6
arahy.Tifrunner.gnm1.ann1.TZP9CN Arachis hypogaea HOM05D006815 ORTHO05D008536 4.5e-48 195.7 224 46.9
FAN09G4209 Fragaria x ananassa HOM05D006815 ORTHO05D008536 5.8e-48 195.3 196 50.0
HPP92_023474 Vanilla planifolia HOM05D006815 ORTHO05D008536 9.9e-48 194.5 205 47.3
FAN02G2829 Fragaria x ananassa HOM05D006815 ORTHO05D008536 1.7e-47 193.7 196 49.5
HPP92_023458 Vanilla planifolia HOM05D006815 ORTHO05D008536 1.7e-47 193.7 205 47.3
arahy.Tifrunner.gnm1.ann1.G1RGZB Arachis hypogaea HOM05D006815 ORTHO05D008536 2.9e-47 193.0 202 49.5
Nitab4.5_0002339g0010 Nicotiana tabacum HOM05D006815 ORTHO05D008536 2.9e-47 193.0 237 45.1
Aa31LG1G24180 Aethionema arabicum HOM05D006815 ORTHO05D008536 3.8e-47 192.6 267 42.7
Phvul.001G144400 Phaseolus vulgaris HOM05D006815 ORTHO05D008536 8.4e-47 191.4 241 44.8
VMungo1383G0507 Vigna mungo HOM05D006815 ORTHO05D008536 7.1e-46 188.3 264 43.2
Lj1g0024455 Lotus japonicus HOM05D006815 ORTHO05D008536 3.5e-45 186.0 201 50.7
Glyma.19G149900 Glycine max HOM05D006815 ORTHO05D008536 4.6e-45 185.7 241 44.4
Psat3g067520 Pisum sativum HOM05D006815 ORTHO05D008536 1.3e-44 184.1 254 43.3
Ca_08540_v3 Cicer arietinum L. HOM05D006815 ORTHO05D008536 3.0e-44 183.0 201 49.3
Glyma.03G146600 Glycine max HOM05D006815 ORTHO05D008536 6.7e-44 181.8 251 43.0
Medtr7g093640 Medicago truncatula HOM05D006815 ORTHO05D008536 8.7e-44 181.4 254 43.3
TPR.G13363 Trifolium pratense HOM05D006815 ORTHO05D008536 4.3e-43 179.1 209 47.4
arahy.Tifrunner.gnm1.ann1.70NGGP Arachis hypogaea HOM05D006815 ORTHO05D008536 1.6e-42 177.2 227 44.1
vmacro22625 Vaccinium macrocarpon HOM05D006815 ORTHO05D008536 1.6e-42 177.2 243 42.8
Os03g0226700 Oryza sativa ssp. japonica HOM05D006815 ORTHO05D008536 6.0e-37 158.7 235 38.7
arahy.Tifrunner.gnm1.ann1.13XKQP Arachis hypogaea HOM05D006815 ORTHO05D008536 2.1e-34 150.2 224 41.5
Sc13g0002390 Simmondsia chinensis HOM05D006815 ORTHO05D008536 2.8e-34 149.8 166 49.4
CAN.G274.29 Capsicum annuum HOM05D006815 ORTHO05D008536 9.0e-33 144.8 144 51.4
CARHR137070 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.4e-32 142.9 194 45.4
MD12G1054600 Malus domestica HOM05D006815 ORTHO05D008536 1.0e-31 141.4 151 47.7
SEGI_30907 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 3.9e-28 129.4 185 38.4
Mapoly0159s0012 Marchantia polymorpha HOM05D006815 ORTHO05D008536 1.1e-19 101.3 164 35.4
Pp3c12_7730 Physcomitrium patens HOM05D006815 ORTHO05D008536 2.2e-18 97.1 202 28.7
Zm00001eb009870 Zea mays HOM05D006815 ORTHO05D008536 1.8e-17 94.0 177 32.8
BcaC03g14280 Brassica carinata HOM05D006815 ORTHO05D008536 6.5e-15 85.5 191 31.4
Nn6g34990 Nelumbo nucifera HOM05D006815 ORTHO05D008536 1.1e-14 84.7 71 52.1
SEGI_06955 Sequoiadendron giganteum HOM05D006815 ORTHO05D008536 4.2e-14 82.8 124 37.1
arahy.Tifrunner.gnm1.ann1.19RU7Q Arachis hypogaea HOM05D006815 ORTHO05D008536 7.9e-13 78.6 75 49.3
CARHR137080 Cardamine hirsuta HOM05D006815 ORTHO05D008536 3.9e-12 76.3 67 52.2


User provided reference genes

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