Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 8.4e-99 364.0 229 100.0
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 5.6e-42 175.3 217 47.5
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 3.4e-39 166.0 210 44.8
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 5.4e-37 158.7 220 47.3
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.7e-36 156.4 227 46.7
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 7.8e-36 154.8 228 45.6
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 7.8e-36 154.8 219 45.2
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 3.0e-35 152.9 222 40.5
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 1.5e-34 150.6 224 40.2
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 5.6e-34 148.7 216 51.9
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 7.3e-34 148.3 213 43.2
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 8.0e-33 144.8 212 43.9
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 5.2e-32 142.1 235 46.8
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 2.6e-31 139.8 221 44.3
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 2.6e-31 139.8 222 38.3
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 3.4e-31 139.4 224 38.8
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 4.4e-31 139.0 211 45.5
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 5.8e-31 138.7 221 40.7
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 9.8e-31 137.9 210 38.6
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 1.3e-30 137.5 204 44.6
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 1.7e-30 137.1 225 48.0
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.9e-30 136.3 243 40.3
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.9e-30 136.3 243 40.3
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 2.9e-30 136.3 225 36.0
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 2.9e-30 136.3 225 41.3
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 2.9e-30 136.3 243 40.7
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 2.9e-30 136.3 204 38.2
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 6.4e-30 135.2 243 39.9
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 8.3e-30 134.8 228 37.3
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 8.3e-30 134.8 199 43.7
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 1.4e-29 134.0 214 44.4
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 2.4e-29 133.3 244 39.8
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.4e-29 133.3 204 44.1
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 4.1e-29 132.5 194 44.3
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 4.1e-29 132.5 194 44.3
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 5.4e-29 132.1 214 38.3
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 9.2e-29 131.3 233 39.9
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 9.2e-29 131.3 244 39.3
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 1.6e-28 130.6 122 55.7
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 4.6e-28 129.0 215 36.3
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 1.0e-27 127.9 223 36.8
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 1.7e-27 127.1 220 43.2
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 3.9e-27 125.9 193 36.8
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 8.6e-27 124.8 221 47.5
CDE05G1332 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 8.6e-27 124.8 103 95.1
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.1e-26 124.4 213 36.6
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 1.9e-26 123.6 214 38.3
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 1.9e-26 123.6 213 36.6
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 3.3e-26 122.9 230 40.9
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 3.3e-26 122.9 227 44.9
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 4.3e-26 122.5 210 41.4
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 7.3e-26 121.7 214 40.2
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 9.5e-26 121.3 214 43.5
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 1.2e-25 120.9 194 39.2
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 1.6e-25 120.6 192 44.3
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 2.1e-25 120.2 249 35.3
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 2.8e-25 119.8 244 36.9
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 1.1e-24 117.9 124 48.4
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 1.1e-24 117.9 120 50.0
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 1.1e-24 117.9 184 40.8
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 1.1e-24 117.9 190 38.9
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 1.8e-24 117.1 228 36.4
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 1.8e-24 117.1 228 36.4
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 2.3e-24 116.7 99 57.6
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 2.3e-24 116.7 185 37.3
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 4.0e-24 115.9 226 37.2
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 4.0e-24 115.9 211 36.0
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 4.0e-24 115.9 207 35.3
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 5.2e-24 115.5 221 38.9
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 5.2e-24 115.5 225 37.3
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 6.8e-24 115.2 120 50.0
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 1.2e-23 114.4 234 37.6
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 1.2e-23 114.4 228 37.3
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 1.2e-23 114.4 205 38.0
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 2.0e-23 113.6 211 37.9
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 2.6e-23 113.2 117 47.9
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 4.4e-23 112.5 122 50.8
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 7.6e-23 111.7 208 35.6
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 9.9e-23 111.3 219 39.7
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 9.9e-23 111.3 227 38.8
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 1.7e-22 110.5 117 48.7
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 3.7e-22 109.4 175 42.3
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 4.9e-22 109.0 218 38.5
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 4.9e-22 109.0 120 51.7
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 8.3e-22 108.2 211 34.6
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.1e-21 107.8 227 37.0
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 1.1e-21 107.8 209 37.8
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 4.1e-21 105.9 220 33.2
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 5.4e-21 105.5 197 37.6
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 9.2e-21 104.8 114 51.8
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 2.7e-20 103.2 239 32.2
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 3.5e-20 102.8 213 34.7
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 3.9e-19 99.4 114 50.9
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 3.9e-19 99.4 114 50.9
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 3.9e-19 99.4 114 50.9
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 5.1e-19 99.0 103 57.3
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 1.1e-18 97.8 114 50.9
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 5.6e-18 95.5 113 53.1
PGSC0003DMG400011585 Solanum tuberosum HOM05D005697 ORTHO05D006951 7.3e-18 95.1 153 50.3
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 1.2e-17 94.4 215 33.5
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.6e-17 94.0 109 53.2
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 4.7e-17 92.4 117 50.4
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 6.2e-17 92.0 91 51.6
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 1.1e-16 91.3 111 45.0
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 4.0e-16 89.4 113 49.6
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 5.2e-16 89.0 127 47.2
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 6.8e-16 88.6 213 30.5
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 8.9e-16 88.2 117 50.4
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 2.6e-15 86.7 247 31.6
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 3.4e-15 86.3 131 43.5
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 9.9e-15 84.7 113 49.6
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 9.9e-15 84.7 113 49.6
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 9.9e-15 84.7 113 49.6
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 9.9e-15 84.7 113 49.6
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 9.9e-15 84.7 113 49.6
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 1.3e-14 84.3 114 45.6
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 2.9e-14 83.2 113 49.6
CDE08G0630 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 2.9e-14 83.2 146 48.6
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 3.8e-14 82.8 104 49.0
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 3.8e-14 82.8 112 46.4
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 4.9e-14 82.4 111 46.8
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 6.4e-14 82.0 212 36.8
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.1e-13 81.3 134 41.0
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 1.9e-13 80.5 115 44.3
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 3.2e-13 79.7 128 39.8
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 2.7e-12 76.6 177 32.8
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.7e-12 76.6 205 32.2
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 3.5e-12 76.3 113 41.6
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 1.5e-10 70.9 226 27.9
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 5.8e-07 58.9 48 64.6
Nitab4.5_0000451g0070 Nicotiana tabacum HOM05D005697 ORTHO05D006951 3.8e-06 56.2 138 30.4


User provided reference genes

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