Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2460 Ceratophyllum demersum HOM05D005666 ORTHO05D007183 0.0e+00 1329.7 683 100.0
TAR371G0349 Trochodendron aralioides HOM05D005666 ORTHO05D007183 7.8e-225 784.3 710 59.9
Aqoxy3G01199 Aquilegia oxysepala HOM05D005666 ORTHO05D007183 6.0e-217 758.1 713 56.2
Hma1.2p1_0999F.1_g246210 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 4.9e-211 738.4 701 55.2
PSO017G6377 Papaver somniferum HOM05D005666 ORTHO05D007183 5.4e-210 734.9 695 56.1
Nn3g16730 Nelumbo nucifera HOM05D005666 ORTHO05D007183 1.2e-209 733.8 690 57.4
MBI16_g31718_MAGBIO Magnolia biondii HOM05D005666 ORTHO05D007183 6.6e-208 728.0 712 55.8
PSO478G0823 Papaver somniferum HOM05D005666 ORTHO05D007183 6.6e-208 728.0 695 55.7
vmacro18287 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 1.5e-207 726.9 711 54.4
GSVIVG01032407001 Vitis vinifera HOM05D005666 ORTHO05D007183 5.6e-207 724.9 697 56.4
Gorai.012G064300 Gossypium raimondii HOM05D005666 ORTHO05D007183 5.8e-204 714.9 715 54.1
Actinidia35772 Actinidia chinensis HOM05D005666 ORTHO05D007183 9.9e-204 714.1 710 52.7
QL02p074714 Quercus lobata HOM05D005666 ORTHO05D007183 2.2e-203 713.0 711 54.6
Rhsim10G0213300 Rhododendron simsii HOM05D005666 ORTHO05D007183 2.9e-203 712.6 710 53.8
Gohir.D04G057600 Gossypium hirsutum HOM05D005666 ORTHO05D007183 1.4e-202 710.3 713 53.6
Duzib147G1248 Durio zibethinus HOM05D005666 ORTHO05D007183 5.4e-202 708.4 711 53.4
Atru.chr6.2394 Acer truncatum HOM05D005666 ORTHO05D007183 7.1e-202 708.0 716 53.5
Rhsim08G0049000 Rhododendron simsii HOM05D005666 ORTHO05D007183 4.3e-199 698.7 698 54.0
CANSAT64G2468 Cannabis sativa HOM05D005666 ORTHO05D007183 5.6e-199 698.4 711 53.4
Gohir.A05G355700 Gossypium hirsutum HOM05D005666 ORTHO05D007183 2.8e-198 696.0 696 53.9
Cpa.g.sc130.81 Carica papaya HOM05D005666 ORTHO05D007183 3.7e-198 695.7 717 52.6
MD09G1027000 Malus domestica HOM05D005666 ORTHO05D007183 5.8e-196 688.3 711 53.4
PGR083G1531 Punica granatum HOM05D005666 ORTHO05D007183 7.6e-196 688.0 705 52.8
AUR62026681 Chenopodium quinoa HOM05D005666 ORTHO05D007183 1.3e-195 687.2 713 52.3
Glyma.05G003600 Glycine max HOM05D005666 ORTHO05D007183 2.9e-195 686.0 715 51.6
MD17G1027000 Malus domestica HOM05D005666 ORTHO05D007183 8.4e-195 684.5 712 53.1
RcHm_v2.0_Chr2g0172791 Rosa chinensis HOM05D005666 ORTHO05D007183 3.2e-194 682.6 735 51.7
COL.COLO4_29116 Corchorus olitorius HOM05D005666 ORTHO05D007183 5.5e-194 681.8 734 52.3
Migut.K01395 Erythranthe guttata HOM05D005666 ORTHO05D007183 5.5e-194 681.8 691 52.4
Haze_10618 Corylus avellana HOM05D005666 ORTHO05D007183 1.2e-193 680.6 693 54.8
Manes.17G112200 Manihot esculenta HOM05D005666 ORTHO05D007183 1.2e-193 680.6 711 52.5
Potri.001G345200 Populus trichocarpa HOM05D005666 ORTHO05D007183 2.1e-193 679.9 714 51.0
Sabra16G0224200 Salix brachista HOM05D005666 ORTHO05D007183 2.7e-193 679.5 711 51.6
CiPaw.03G043800 Carya illinoinensis HOM05D005666 ORTHO05D007183 3.0e-192 676.0 718 52.4
Ciclev10014455m.g Citrus clementina HOM05D005666 ORTHO05D007183 5.1e-192 675.2 714 52.1
Phvul.004G006900 Phaseolus vulgaris HOM05D005666 ORTHO05D007183 1.9e-191 673.3 719 51.2
Thecc.04G017300 Theobroma cacao HOM05D005666 ORTHO05D007183 4.3e-191 672.2 714 51.4
Cc07_g01670 Coffea canephora HOM05D005666 ORTHO05D007183 5.6e-191 671.8 720 51.1
TWI56G0621 Tripterygium wilfordii HOM05D005666 ORTHO05D007183 5.6e-191 671.8 713 51.1
CsaV3_5G027130 Cucumis sativus L. HOM05D005666 ORTHO05D007183 1.4e-189 667.2 716 50.4
ClCG09G019260 Citrullus lanatus HOM05D005666 ORTHO05D007183 2.4e-189 666.4 715 50.9
Lj2g0025454 Lotus japonicus HOM05D005666 ORTHO05D007183 2.4e-189 666.4 694 51.6
VMungo0464G0315 Vigna mungo HOM05D005666 ORTHO05D007183 2.4e-189 666.4 715 50.5
Zm00001eb156580 Zea mays HOM05D005666 ORTHO05D007183 1.5e-188 663.7 697 52.7
Hund22837 Selenicereus undatus HOM05D005666 ORTHO05D007183 2.6e-188 662.9 714 51.1
HanXRQChr15g0475291 Helianthus annuus HOM05D005666 ORTHO05D007183 4.5e-188 662.1 699 51.4
Eucgr.L01920 Eucalyptus grandis HOM05D005666 ORTHO05D007183 5.8e-188 661.8 719 51.0
Sc03g0007440 Simmondsia chinensis HOM05D005666 ORTHO05D007183 5.8e-188 661.8 703 50.8
ECA246G2761 Erigeron canadensis HOM05D005666 ORTHO05D007183 1.0e-187 661.0 708 50.8
Ah.05g168070 Amaranthus hybridus HOM05D005666 ORTHO05D007183 1.3e-187 660.6 707 50.5
SGA_v2.0_scaffold47G17503 Striga asiatica HOM05D005666 ORTHO05D007183 1.7e-187 660.2 708 50.8
TPR.G14074 Trifolium pratense HOM05D005666 ORTHO05D007183 1.7e-187 660.2 710 50.3
PGSC0003DMG400006959 Solanum tuberosum HOM05D005666 ORTHO05D007183 2.9e-187 659.4 705 50.8
arahy.Tifrunner.gnm1.ann1.XQUA9L Arachis hypogaea HOM05D005666 ORTHO05D007183 8.4e-187 657.9 704 49.7
Medtr8g094170 Medicago truncatula HOM05D005666 ORTHO05D007183 8.4e-187 657.9 718 49.9
CAN.G1057.3 Capsicum annuum HOM05D005666 ORTHO05D007183 1.4e-186 657.1 700 50.1
MELO3C021580.2 Cucumis melo HOM05D005666 ORTHO05D007183 1.9e-186 656.8 717 50.1
FAN14G3607 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.2e-186 656.0 731 49.5
Sopen02g016930 Solanum pennellii HOM05D005666 ORTHO05D007183 7.1e-186 654.8 711 49.9
FAN02G4175 Fragaria x ananassa HOM05D005666 ORTHO05D007183 9.3e-186 654.4 740 49.2
Nitab4.5_0008365g0020 Nicotiana tabacum HOM05D005666 ORTHO05D007183 2.1e-185 653.3 706 49.4
FAN05G0542 Fragaria x ananassa HOM05D005666 ORTHO05D007183 7.9e-185 651.4 746 48.8
Sed0018750 Sechium edule HOM05D005666 ORTHO05D007183 7.9e-185 651.4 712 49.7
SalBow7G2092 Salvia bowleyana HOM05D005666 ORTHO05D007183 1.0e-184 651.0 708 49.4
FAN09G4801 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.0e-184 649.4 731 49.1
CSS0006540 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 6.7e-184 648.3 652 53.7
DCAR_027499 Daucus carota HOM05D005666 ORTHO05D007183 1.9e-183 646.7 679 51.0
Ca_04159_v3 Cicer arietinum L. HOM05D005666 ORTHO05D007183 9.7e-183 644.4 704 49.6
AL6G30550 Arabidopsis lyrata HOM05D005666 ORTHO05D007183 1.6e-182 643.7 700 51.6
HanXRQChr17g0548481 Helianthus annuus HOM05D005666 ORTHO05D007183 1.6e-182 643.7 688 51.0
Thhalv10012831m.g Eutrema salsugineum HOM05D005666 ORTHO05D007183 6.3e-182 641.7 696 51.6
Lalb_Chr13g0300491 Lupinus albus HOM05D005666 ORTHO05D007183 3.1e-181 639.4 710 48.0
Carub.0006s1746 Capsella rubella HOM05D005666 ORTHO05D007183 5.3e-181 638.6 700 51.3
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 6.9e-181 638.3 687 49.8
Lalb_Chr12g0199101 Lupinus albus HOM05D005666 ORTHO05D007183 9.0e-181 637.9 709 48.5
Aa31LG11G15280 Aethionema arabicum HOM05D005666 ORTHO05D007183 1.5e-180 637.1 702 51.4
AT5G19130 Arabidopsis thaliana HOM05D005666 ORTHO05D007183 1.5e-180 637.1 700 51.3
Sp6g25230 Schrenkiella parvula HOM05D005666 ORTHO05D007183 1.5e-180 637.1 700 51.1
Hma1.2p1_0999F.1_g246220 Hydrangea macrophylla HOM05D005666 ORTHO05D007183 3.4e-180 636.0 599 55.1
BraA10t44118Z Brassica rapa HOM05D005666 ORTHO05D007183 4.5e-180 635.6 700 51.4
Prupe.3G291700 Prunus persica HOM05D005666 ORTHO05D007183 3.8e-179 632.5 655 52.5
BcaB08g36600 Brassica carinata HOM05D005666 ORTHO05D007183 6.5e-179 631.7 694 51.4
BcaC04g18594 Brassica carinata HOM05D005666 ORTHO05D007183 1.9e-178 630.2 700 51.1
BolC9t58577H Brassica oleracea HOM05D005666 ORTHO05D007183 3.2e-178 629.4 700 51.3
A10p20490 Brassica napus HOM05D005666 ORTHO05D007183 7.2e-178 628.2 700 50.7
C09p57110 Brassica napus HOM05D005666 ORTHO05D007183 7.2e-178 628.2 700 51.0
Nitab4.5_0002529g0030 Nicotiana tabacum HOM05D005666 ORTHO05D007183 1.3e-176 624.0 689 48.9
Lsat_1_v5_gn_0_47721 Lactuca sativa HOM05D005666 ORTHO05D007183 5.1e-176 622.1 668 50.4
Dinv33442 Davidia involucrata HOM05D005666 ORTHO05D007183 7.4e-175 618.2 670 51.2
ATR0686G164 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.7e-174 617.1 605 53.7
Lju41A42G100 Lonicera japonica HOM05D005666 ORTHO05D007183 3.1e-173 612.8 613 52.0
FvH4_6g51190 Fragaria vesca HOM05D005666 ORTHO05D007183 3.4e-172 609.4 685 48.5
Solyc02g067820.4 Solanum lycopersicum HOM05D005666 ORTHO05D007183 1.0e-171 607.8 692 48.4
EL10Ac1g01578 Beta vulgaris HOM05D005666 ORTHO05D007183 1.1e-170 604.4 727 47.9
HPP92_013793 Vanilla planifolia HOM05D005666 ORTHO05D007183 3.6e-169 599.4 687 49.1
Glyma.19G004600 Glycine max HOM05D005666 ORTHO05D007183 2.4e-165 586.6 651 49.0
Oeu048621.1 Olea europaea HOM05D005666 ORTHO05D007183 6.9e-165 585.1 609 49.8
THA.LOC104824726 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 3.8e-163 579.3 682 49.0
DCAR_011253 Daucus carota HOM05D005666 ORTHO05D007183 8.5e-163 578.2 769 44.0
Peaxi162Scf00080g00117 Petunia axillaris HOM05D005666 ORTHO05D007183 4.2e-162 575.9 682 46.3
Psat1g054440 Pisum sativum HOM05D005666 ORTHO05D007183 3.3e-159 566.2 611 50.2
unitig_747.g21863 Utricularia gibba HOM05D005666 ORTHO05D007183 2.8e-158 563.1 702 44.2
FAN05G2905 Fragaria x ananassa HOM05D005666 ORTHO05D007183 3.0e-152 543.1 627 50.2
CSS0011984 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 1.3e-150 537.7 595 51.1
Eucgr.J02243 Eucalyptus grandis HOM05D005666 ORTHO05D007183 3.6e-145 519.6 527 53.9
CSS0008870 Camellia sinensis var. sinensis HOM05D005666 ORTHO05D007183 9.5e-130 468.4 426 59.6
vmacro06910 Vaccinium macrocarpon HOM05D005666 ORTHO05D007183 2.2e-126 457.2 517 52.0
CARHR193820 Cardamine hirsuta HOM05D005666 ORTHO05D007183 3.3e-122 443.4 484 50.4
BcaB05g23370 Brassica carinata HOM05D005666 ORTHO05D007183 4.1e-117 426.4 703 41.4
AUR62040590 Chenopodium quinoa HOM05D005666 ORTHO05D007183 4.1e-117 426.4 422 55.0
Actinidia16943 Actinidia chinensis HOM05D005666 ORTHO05D007183 1.5e-114 417.9 636 42.5
Mapoly0008s0195 Marchantia polymorpha HOM05D005666 ORTHO05D007183 7.8e-108 395.6 743 36.9
AagrBONN_evm.TU.Sc2ySwM_344.4982 Anthoceros agrestis HOM05D005666 ORTHO05D007183 2.3e-107 394.0 762 34.4
SMO134G0274 Selaginella moellendorffii HOM05D005666 ORTHO05D007183 5.6e-106 389.4 700 35.7
ATR0762G005 Amborella trichopoda HOM05D005666 ORTHO05D007183 4.3e-90 336.7 328 54.3
SEGI_39396 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 4.3e-82 310.1 323 49.5
Pp3c22_6140 Physcomitrium patens HOM05D005666 ORTHO05D007183 2.0e-79 301.2 477 38.4
THA.LOC109116951 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 3.0e-67 260.8 286 53.1
ATR0919G001 Amborella trichopoda HOM05D005666 ORTHO05D007183 1.1e-66 258.8 237 55.7
SHI16418 Sapria himalayana HOM05D005666 ORTHO05D007183 1.3e-49 202.2 284 42.6
SHI16416 Sapria himalayana HOM05D005666 ORTHO05D007183 4.2e-45 187.2 263 43.7
Os01g0682200 Oryza sativa ssp. japonica HOM05D005666 ORTHO05D007183 9.7e-42 176.0 244 40.6
CBR_g49194 Chara braunii HOM05D005666 ORTHO05D007183 5.0e-38 163.7 462 28.1
MCO10G117 Micromonas commoda HOM05D005666 ORTHO05D007183 1.7e-30 138.7 647 24.4
TPR.G20372 Trifolium pratense HOM05D005666 ORTHO05D007183 1.1e-24 119.4 159 39.0
THA.LOC104820325 Tarenaya hassleriana HOM05D005666 ORTHO05D007183 1.8e-24 118.6 157 46.5
Oeu030978.1 Olea europaea HOM05D005666 ORTHO05D007183 2.0e-23 115.2 119 51.3
Oeu048620.1 Olea europaea HOM05D005666 ORTHO05D007183 8.3e-17 93.2 75 58.7
A02p05250 Brassica napus HOM05D005666 ORTHO05D007183 3.9e-14 84.3 291 28.5
SEGI_03684 Sequoiadendron giganteum HOM05D005666 ORTHO05D007183 8.6e-14 83.2 83 54.2
CiPaw.04G028500 Carya illinoinensis HOM05D005666 ORTHO05D007183 1.1e-13 82.8 63 66.7


User provided reference genes

Program Settings