Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2328 Ceratophyllum demersum HOM05D005675 ORTHO05D006884 5.1e-199 697.6 363 100.0
TAR626G0076 Trochodendron aralioides HOM05D005675 ORTHO05D006884 2.0e-62 243.8 358 41.6
CAN.G1751.7 Capsicum annuum HOM05D005675 ORTHO05D006884 2.1e-59 233.8 354 41.2
Hma1.2p1_0661F.1_g198030 Hydrangea macrophylla HOM05D005675 ORTHO05D006884 3.9e-58 229.6 356 39.6
GSVIVG01000235001 Vitis vinifera HOM05D005675 ORTHO05D006884 1.1e-57 228.0 352 40.6
MBI13_g31573_MAGBIO Magnolia biondii HOM05D005675 ORTHO05D006884 5.7e-57 225.7 390 40.5
Dinv25398 Davidia involucrata HOM05D005675 ORTHO05D006884 9.7e-57 224.9 352 41.2
Dinv26452 Davidia involucrata HOM05D005675 ORTHO05D006884 9.1e-55 218.4 354 41.0
QL11p008661 Quercus lobata HOM05D005675 ORTHO05D006884 2.0e-54 217.2 359 40.1
Solyc12g017470.2 Solanum lycopersicum HOM05D005675 ORTHO05D006884 2.6e-54 216.9 353 38.0
TWI34G2031 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 2.2e-53 213.8 365 39.5
PSO170G1351 Papaver somniferum HOM05D005675 ORTHO05D006884 3.8e-53 213.0 361 40.2
Solyc07g017290.4 Solanum lycopersicum HOM05D005675 ORTHO05D006884 3.8e-53 213.0 361 38.0
Sopen07g006010 Solanum pennellii HOM05D005675 ORTHO05D006884 3.8e-53 213.0 360 37.8
TWI63G1173 Tripterygium wilfordii HOM05D005675 ORTHO05D006884 6.5e-53 212.2 361 38.8
ATR0626G294 Amborella trichopoda HOM05D005675 ORTHO05D006884 1.1e-52 211.5 365 40.0
PSO063G5127 Papaver somniferum HOM05D005675 ORTHO05D006884 5.5e-52 209.1 361 38.5
Nitab4.5_0014696g0010 Nicotiana tabacum HOM05D005675 ORTHO05D006884 8.0e-51 205.3 357 38.1
Manes.01G177400 Manihot esculenta HOM05D005675 ORTHO05D006884 1.0e-50 204.9 357 38.1
Ciclev10008766m.g Citrus clementina HOM05D005675 ORTHO05D006884 1.8e-50 204.1 353 37.7
CSS0039496 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 2.3e-50 203.8 356 36.8
Cfa020754 Carpinus fangiana HOM05D005675 ORTHO05D006884 2.3e-50 203.8 365 38.6
Actinidia02470 Actinidia chinensis HOM05D005675 ORTHO05D006884 3.3e-49 199.9 353 36.8
Prupe.4G276600 Prunus persica HOM05D005675 ORTHO05D006884 3.3e-49 199.9 349 37.5
MD07G1305000 Malus domestica HOM05D005675 ORTHO05D006884 4.8e-48 196.1 366 38.0
COL.COLO4_23415 Corchorus olitorius HOM05D005675 ORTHO05D006884 8.2e-48 195.3 362 37.0
PGR044G2364 Punica granatum HOM05D005675 ORTHO05D006884 8.2e-48 195.3 352 36.9
THA.LOC104815311 Tarenaya hassleriana HOM05D005675 ORTHO05D006884 1.1e-47 194.9 351 36.2
Cc00_g00090 Coffea canephora HOM05D005675 ORTHO05D006884 1.4e-47 194.5 357 37.0
HPP92_010804 Vanilla planifolia HOM05D005675 ORTHO05D006884 1.4e-47 194.5 355 37.7
CiPaw.16G104100 Carya illinoinensis HOM05D005675 ORTHO05D006884 3.1e-47 193.4 358 37.7
DCAR_009047 Daucus carota HOM05D005675 ORTHO05D006884 1.6e-46 191.0 360 35.3
CAN.G1751.9 Capsicum annuum HOM05D005675 ORTHO05D006884 2.0e-46 190.7 311 39.5
BcaC05g29447 Brassica carinata HOM05D005675 ORTHO05D006884 2.6e-46 190.3 356 36.5
Lj1g0011117 Lotus japonicus HOM05D005675 ORTHO05D006884 2.6e-46 190.3 351 34.2
Gohir.A08G016800 Gossypium hirsutum HOM05D005675 ORTHO05D006884 3.5e-46 189.9 361 35.2
Gohir.D08G027200 Gossypium hirsutum HOM05D005675 ORTHO05D006884 3.5e-46 189.9 361 35.7
Gorai.004G024100 Gossypium raimondii HOM05D005675 ORTHO05D006884 4.5e-46 189.5 361 34.9
AUR62002223 Chenopodium quinoa HOM05D005675 ORTHO05D006884 7.7e-46 188.7 351 35.3
Cpa.g.sc115.21 Carica papaya HOM05D005675 ORTHO05D006884 3.8e-45 186.4 361 35.7
BraA05t22649Z Brassica rapa HOM05D005675 ORTHO05D006884 6.5e-45 185.7 358 35.5
Duzib168G1643 Durio zibethinus HOM05D005675 ORTHO05D006884 8.5e-45 185.3 369 35.8
Ah.06g185690 Amaranthus hybridus HOM05D005675 ORTHO05D006884 1.5e-44 184.5 350 34.6
A05p38580 Brassica napus HOM05D005675 ORTHO05D006884 1.5e-44 184.5 363 36.4
FAN09G4269 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.5e-44 184.5 354 36.7
FAN14G0585 Fragaria x ananassa HOM05D005675 ORTHO05D006884 1.9e-44 184.1 354 36.7
Potri.006G078700 Populus trichocarpa HOM05D005675 ORTHO05D006884 4.2e-44 183.0 355 34.6
ECA240G2624 Erigeron canadensis HOM05D005675 ORTHO05D006884 5.5e-44 182.6 357 35.9
RcHm_v2.0_Chr2g0128761 Rosa chinensis HOM05D005675 ORTHO05D006884 7.2e-44 182.2 353 36.8
Sabra06G0059600 Salix brachista HOM05D005675 ORTHO05D006884 1.2e-43 181.4 362 35.6
Medtr6g093070 Medicago truncatula HOM05D005675 ORTHO05D006884 1.6e-43 181.0 349 36.4
Thhalv10021093m.g Eutrema salsugineum HOM05D005675 ORTHO05D006884 2.1e-43 180.6 349 36.4
TPR.G21343 Trifolium pratense HOM05D005675 ORTHO05D006884 3.6e-43 179.9 357 35.6
BolC5t34404H Brassica oleracea HOM05D005675 ORTHO05D006884 4.7e-43 179.5 358 35.5
C05p57470 Brassica napus HOM05D005675 ORTHO05D006884 8.0e-43 178.7 358 34.9
CANSAT80G1422 Cannabis sativa HOM05D005675 ORTHO05D006884 8.0e-43 178.7 363 36.4
vmacro20762 Vaccinium macrocarpon HOM05D005675 ORTHO05D006884 8.0e-43 178.7 402 33.6
AUR62015436 Chenopodium quinoa HOM05D005675 ORTHO05D006884 1.0e-42 178.3 361 34.3
AL3G45830 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 1.4e-42 177.9 365 35.3
Migut.L01917 Erythranthe guttata HOM05D005675 ORTHO05D006884 2.3e-42 177.2 358 34.1
FAN05G3686 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.3e-42 177.2 370 35.4
AL3G22010 Arabidopsis lyrata HOM05D005675 ORTHO05D006884 3.0e-42 176.8 362 35.1
SGA_v2.0_scaffold339G49254 Striga asiatica HOM05D005675 ORTHO05D006884 4.0e-42 176.4 359 34.3
Thecc.09G196800 Theobroma cacao HOM05D005675 ORTHO05D006884 4.0e-42 176.4 340 35.0
Carub.0003s0981 Capsella rubella HOM05D005675 ORTHO05D006884 8.8e-42 175.3 362 34.3
Hund11839 Selenicereus undatus HOM05D005675 ORTHO05D006884 8.8e-42 175.3 350 34.6
Eucgr.C02170 Eucalyptus grandis HOM05D005675 ORTHO05D006884 2.0e-41 174.1 354 33.3
PGSC0003DMG400006457 Solanum tuberosum HOM05D005675 ORTHO05D006884 2.0e-41 174.1 310 37.4
AT3G10572 Arabidopsis thaliana HOM05D005675 ORTHO05D006884 4.4e-41 172.9 362 36.2
ClCG05G011260 Citrullus lanatus HOM05D005675 ORTHO05D006884 1.3e-40 171.4 352 36.4
Sp3g08870 Schrenkiella parvula HOM05D005675 ORTHO05D006884 1.3e-40 171.4 353 34.0
arahy.Tifrunner.gnm1.ann1.RL68NL Arachis hypogaea HOM05D005675 ORTHO05D006884 2.2e-40 170.6 360 34.4
Sed0020807 Sechium edule HOM05D005675 ORTHO05D006884 2.2e-40 170.6 358 36.9
SalBow5G0607 Salvia bowleyana HOM05D005675 ORTHO05D006884 3.7e-40 169.9 368 33.4
CAN.G309.91 Capsicum annuum HOM05D005675 ORTHO05D006884 4.8e-40 169.5 291 37.1
CsaV3_3G021160 Cucumis sativus L. HOM05D005675 ORTHO05D006884 6.3e-40 169.1 354 35.3
HanXRQChr03g0067281 Helianthus annuus HOM05D005675 ORTHO05D006884 1.8e-39 167.5 353 35.7
Lalb_Chr14g0362531 Lupinus albus HOM05D005675 ORTHO05D006884 1.8e-39 167.5 358 34.1
Ca_25634_v3 Cicer arietinum L. HOM05D005675 ORTHO05D001317 2.4e-39 167.2 355 31.8
MSTRG.26518 Avicennia marina HOM05D005675 ORTHO05D006884 3.1e-39 166.8 368 31.8
VMungo0464G1932 Vigna mungo HOM05D005675 ORTHO05D001317 3.1e-39 166.8 357 35.6
SGA_v2.0_scaffold21G09606 Striga asiatica HOM05D005675 ORTHO05D006884 7.0e-39 165.6 364 33.0
BcaC01g04171 Brassica carinata HOM05D005675 ORTHO05D006884 1.2e-38 164.9 356 32.6
CAN.G486.3 Capsicum annuum HOM05D002496 ORTHO05D002787 4.5e-38 162.9 267 39.7
Os06g0702800 Oryza sativa ssp. japonica HOM05D005675 ORTHO05D006884 4.5e-38 162.9 364 32.4
A03p36640 Brassica napus HOM05D005675 ORTHO05D006884 1.7e-37 161.0 356 32.3
Lsat_1_v5_gn_7_57460 Lactuca sativa HOM05D005675 ORTHO05D006884 1.7e-37 161.0 343 33.8
Phvul.004G178000 Phaseolus vulgaris HOM05D005675 ORTHO05D006884 2.2e-37 160.6 351 35.3
Aa31LG3G3440 Aethionema arabicum HOM05D005675 ORTHO05D006884 2.9e-37 160.2 355 32.7
BraA03t12828Z Brassica rapa HOM05D005675 ORTHO05D006884 2.9e-37 160.2 361 32.7
Rhsim01G0109900 Rhododendron simsii HOM05D005675 ORTHO05D006884 1.1e-36 158.3 326 36.5
Nn8g41130 Nelumbo nucifera HOM05D005675 ORTHO05D006884 2.5e-36 157.1 194 46.4
Sc26g0001420 Simmondsia chinensis HOM05D005675 ORTHO05D006884 2.5e-36 157.1 318 35.5
EL10Ac3g05860 Beta vulgaris HOM05D005675 ORTHO05D006884 4.2e-36 156.4 333 33.3
Nitab4.5_0000899g0040 Nicotiana tabacum HOM05D005675 ORTHO05D006884 5.5e-36 156.0 192 44.3
Glyma.01G001700 Glycine max HOM05D005675 ORTHO05D006884 6.8e-34 149.1 353 32.0
Atru.chr2.1389 Acer truncatum HOM05D005675 ORTHO05D006884 8.8e-34 148.7 348 33.9
SHI13641 Sapria himalayana HOM05D005675 ORTHO05D006884 1.2e-33 148.3 386 33.4
BolC3t16698H Brassica oleracea HOM05D005675 ORTHO05D006884 2.6e-33 147.1 356 31.2
TAR383G0085 Trochodendron aralioides HOM05D005675 ORTHO05D006884 2.6e-33 147.1 294 34.7
MELO3C020255.2 Cucumis melo HOM05D005675 ORTHO05D006884 2.8e-32 143.7 341 34.0
Oeu036952.2 Olea europaea HOM05D005675 ORTHO05D006884 6.3e-32 142.5 461 28.9
Aqoxy6G03025 Aquilegia oxysepala HOM05D005675 ORTHO05D006884 1.6e-30 137.9 320 32.2
Haze_19098 Corylus avellana HOM05D005675 ORTHO05D006884 4.5e-30 136.3 399 29.8
Zm00001eb227160 Zea mays HOM05D005675 ORTHO05D006884 2.9e-29 133.7 323 31.0
Prupe.3G126100 Prunus persica HOM05D005675 ORTHO05D006884 8.0e-27 125.6 348 32.2
FAN02G0472 Fragaria x ananassa HOM05D005675 ORTHO05D006884 2.0e-25 120.9 187 40.6
SEGI_03452 Sequoiadendron giganteum HOM05D005675 ORTHO05D006884 5.7e-25 119.4 303 31.4
Sopen12g008260 Solanum pennellii HOM05D005675 ORTHO05D006884 5.7e-25 119.4 212 36.8
FvH4_6g26940 Fragaria vesca HOM05D005675 ORTHO05D006884 2.2e-24 117.5 264 33.3
Glyma.07G130600 Glycine max HOM05D005675 ORTHO05D006884 2.8e-24 117.1 213 35.2
CSS0020115 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 8.3e-24 115.5 219 34.7
Pp3c9_5270 Physcomitrium patens HOM05D005675 ORTHO05D006884 1.4e-23 114.8 397 28.7
unitig_578.g16399 Utricularia gibba HOM05D005675 ORTHO05D006884 4.5e-22 109.8 196 35.2
C03p44280 Brassica napus HOM05D005675 ORTHO05D006884 1.7e-21 107.8 355 27.3
Lju432C7G1 Lonicera japonica HOM05D005675 ORTHO05D006884 3.9e-21 106.7 195 36.9
CARHR085110 Cardamine hirsuta HOM05D005675 ORTHO05D006884 9.5e-20 102.1 264 31.4
Mapoly0082s0059 Marchantia polymorpha HOM05D005675 ORTHO05D006884 1.5e-17 94.7 407 26.8
Peaxi162Scf01527g00006 Petunia axillaris HOM05D005675 ORTHO05D006884 2.0e-17 94.4 217 32.3
CAN.G1703.6 Capsicum annuum HOM05D002496 ORTHO05D002787 5.8e-17 92.8 100 42.0
Haze_19095 Corylus avellana HOM05D005675 ORTHO05D006884 2.9e-16 90.5 120 42.5
PSO170G0789 Papaver somniferum HOM05D005675 ORTHO05D006884 5.4e-15 86.3 269 32.7
PSO170G4889 Papaver somniferum HOM05D005675 ORTHO05D006884 5.4e-15 86.3 269 32.7
PSO170G5374 Papaver somniferum HOM05D005675 ORTHO05D006884 5.4e-15 86.3 269 32.7
PSO170G3345 Papaver somniferum HOM05D005675 ORTHO05D006884 4.3e-12 76.6 258 32.2
SMO367G0141 Selaginella moellendorffii HOM05D005675 ORTHO05D006884 5.6e-12 76.3 202 30.2
CARHR085100 Cardamine hirsuta HOM05D005675 ORTHO05D006884 7.3e-12 75.9 99 46.5
Sopen12g008240 Solanum pennellii HOM05D005675 ORTHO05D006884 7.3e-12 75.9 93 41.9
PSO431G0001 Papaver somniferum HOM05D005675 ORTHO05D006884 6.2e-11 72.8 233 31.8
CAN.G2070.2 Capsicum annuum HOM05D005675 ORTHO05D006884 8.0e-11 72.4 147 37.4
PGSC0003DMG400009563 Solanum tuberosum HOM05D005675 ORTHO05D006884 6.8e-10 69.3 172 33.7
Gohir.D08G027550 Gossypium hirsutum HOM05D005675 ORTHO05D006884 5.4e-07 59.7 59 52.5
CSS0044900 Camellia sinensis var. sinensis HOM05D005675 ORTHO05D006884 7.0e-07 59.3 64 51.6
Gorai.004G024600 Gossypium raimondii HOM05D005675 ORTHO05D006884 2.1e-06 57.8 59 50.8
AagrBONN_evm.TU.Sc2ySwM_228.2452 Anthoceros agrestis HOM05D034800 ORTHO05D006884 3.5e-06 57.0 178 24.2


User provided reference genes

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