Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2239 Ceratophyllum demersum HOM05D002612 ORTHO05D002859 1.6e-73 279.3 132 100.0
MBI06_g15023_MAGBIO Magnolia biondii HOM05D002612 ORTHO05D002859 2.6e-15 85.9 106 45.3
Hma1.2p1_0676F.1_g201950 Hydrangea macrophylla HOM05D002612 ORTHO05D002859 1.1e-13 80.5 98 40.8
TAR623G0372 Trochodendron aralioides HOM05D002612 ORTHO05D002859 1.4e-13 80.1 99 42.4
Dinv24067 Davidia involucrata HOM05D002612 ORTHO05D002859 4.1e-13 78.6 99 40.4
Aqoxy2G00058 Aquilegia oxysepala HOM05D002612 ORTHO05D002859 2.0e-12 76.3 96 38.5
Ciclev10012465m.g Citrus clementina HOM05D002612 ORTHO05D002859 1.0e-11 73.9 99 40.4
Lalb_Chr18g0047881 Lupinus albus HOM05D002612 ORTHO05D002859 1.7e-11 73.2 85 47.1
CAN.G570.9 Capsicum annuum HOM05D002612 ORTHO05D002859 8.5e-11 70.9 104 36.5
arahy.Tifrunner.gnm1.ann1.47DXFL Arachis hypogaea HOM05D002612 ORTHO05D002859 1.5e-10 70.1 84 45.2
arahy.Tifrunner.gnm1.ann1.J786L6 Arachis hypogaea HOM05D002612 ORTHO05D002859 1.5e-10 70.1 84 45.2
Nitab4.5_0002488g0060 Nicotiana tabacum HOM05D002612 ORTHO05D002859 1.5e-10 70.1 92 40.2
CiPaw.10G026200 Carya illinoinensis HOM05D002612 ORTHO05D002859 2.5e-10 69.3 126 35.7
Peaxi162Scf00258g00631 Petunia axillaris HOM05D002612 ORTHO05D002859 2.5e-10 69.3 93 39.8
PGR142G1191 Punica granatum HOM05D002612 ORTHO05D002859 2.5e-10 69.3 93 40.9
Prupe.7G077400 Prunus persica HOM05D002612 ORTHO05D002859 3.2e-10 68.9 142 31.7
GSVIVG01033493001 Vitis vinifera HOM05D002612 ORTHO05D002859 3.2e-10 68.9 89 39.3
Actinidia22037 Actinidia chinensis HOM05D002612 ORTHO05D002859 4.2e-10 68.6 96 39.6
TPR.G32347 Trifolium pratense HOM05D002612 ORTHO05D002859 4.2e-10 68.6 124 37.1
MSTRG.19906 Avicennia marina HOM05D002612 ORTHO05D002859 5.5e-10 68.2 122 37.7
Cc06_g15900 Coffea canephora HOM05D002612 ORTHO05D002859 5.5e-10 68.2 106 37.7
SGA_v2.0_scaffold37G14819 Striga asiatica HOM05D002612 ORTHO05D002859 7.2e-10 67.8 122 37.7
ATR0807G015 Amborella trichopoda HOM05D002612 ORTHO05D002859 9.4e-10 67.4 127 32.3
Ca_12071_v3 Cicer arietinum L. HOM05D002612 ORTHO05D002859 9.4e-10 67.4 99 40.4
Atru.chr8.1116 Acer truncatum HOM05D002612 ORTHO05D002859 1.6e-09 66.6 83 42.2
AT2G42080 Arabidopsis thaliana HOM05D002612 ORTHO05D002859 1.6e-09 66.6 106 35.8
A04p31980 Brassica napus HOM05D002612 ORTHO05D002859 1.6e-09 66.6 110 38.2
BraA04t18656Z Brassica rapa HOM05D002612 ORTHO05D002859 1.6e-09 66.6 110 38.2
Carub.0004s2442 Capsella rubella HOM05D002612 ORTHO05D002859 1.6e-09 66.6 106 35.8
TWI74G1029 Tripterygium wilfordii HOM05D002612 ORTHO05D002859 2.7e-09 65.9 120 34.2
BcaB06g29225 Brassica carinata HOM05D002612 ORTHO05D002859 4.7e-09 65.1 93 40.9
AL4G40440 Arabidopsis lyrata HOM05D002612 ORTHO05D002859 8.0e-09 64.3 106 34.9
Eucgr.K01842 Eucalyptus grandis HOM05D002612 ORTHO05D002859 8.0e-09 64.3 96 39.6
Sp4g24300 Schrenkiella parvula HOM05D002612 ORTHO05D002859 8.0e-09 64.3 106 35.8
Sed0010869 Sechium edule HOM05D002612 ORTHO05D002859 8.0e-09 64.3 93 36.6
Solyc03g063350.3 Solanum lycopersicum HOM05D002612 ORTHO05D002859 8.0e-09 64.3 88 38.6
Nitab4.5_0000324g0010 Nicotiana tabacum HOM05D002612 ORTHO05D002859 1.0e-08 63.9 92 39.1
Sopen03g016040 Solanum pennellii HOM05D002612 ORTHO05D002859 1.4e-08 63.5 88 38.6
BcaC02g07265 Brassica carinata HOM05D002612 ORTHO05D002859 1.8e-08 63.2 110 36.4
C04p69490 Brassica napus HOM05D002612 ORTHO05D002859 1.8e-08 63.2 110 37.3
BolC4t28448H Brassica oleracea HOM05D002612 ORTHO05D002859 1.8e-08 63.2 110 37.3
unitig_699.g19445 Utricularia gibba HOM05D002612 ORTHO05D002859 1.8e-08 63.2 75 45.3
Cfa020162 Carpinus fangiana HOM05D002612 ORTHO05D002859 2.3e-08 62.8 99 38.4
Rhsim03G0005800 Rhododendron simsii HOM05D002612 ORTHO05D002859 3.0e-08 62.4 82 42.7
MD14G1056500 Malus domestica HOM05D002612 ORTHO05D002859 4.0e-08 62.0 101 38.6
Manes.09G035700 Manihot esculenta HOM05D002612 ORTHO05D002859 5.2e-08 61.6 114 35.1
Oeu033736.1 Olea europaea HOM05D002612 ORTHO05D002859 5.2e-08 61.6 101 38.6
C04p03250 Brassica napus HOM05D002612 ORTHO05D002859 6.7e-08 61.2 106 34.0
BolC4t21963H Brassica oleracea HOM05D002612 ORTHO05D002859 6.7e-08 61.2 106 34.0
Sed0006567 Sechium edule HOM05D002612 ORTHO05D002859 6.7e-08 61.2 116 36.2
MD12G1056800 Malus domestica HOM05D002612 ORTHO05D002859 8.8e-08 60.8 100 40.0
Psat6g091240 Pisum sativum HOM05D002612 ORTHO05D002859 1.5e-07 60.1 123 35.0
Hund19204 Selenicereus undatus HOM05D002612 ORTHO05D002859 1.5e-07 60.1 126 33.3
A05p02720 Brassica napus HOM05D002612 ORTHO05D002859 2.0e-07 59.7 106 34.0
Haze_19994 Corylus avellana HOM05D002612 ORTHO05D002859 2.0e-07 59.7 83 42.2
FvH4_6g22210 Fragaria vesca HOM05D002612 ORTHO05D002859 2.0e-07 59.7 122 36.1
Sc13g0002290 Simmondsia chinensis HOM05D002612 ORTHO05D002859 2.0e-07 59.7 121 33.1
Lj5g0018767 Lotus japonicus HOM05D002612 ORTHO05D002859 3.3e-07 58.9 61 49.2
BraA05t19264Z Brassica rapa HOM05D002612 ORTHO05D002859 4.4e-07 58.5 91 37.4
CsaV3_3G038780 Cucumis sativus L. HOM05D002612 ORTHO05D002859 4.4e-07 58.5 81 39.5
RcHm_v2.0_Chr3g0479541 Rosa chinensis HOM05D002612 ORTHO05D002859 4.4e-07 58.5 101 39.6
FAN14G2805 Fragaria x ananassa HOM05D002612 ORTHO05D002859 5.7e-07 58.2 122 36.1
FAN14G3252 Fragaria x ananassa HOM05D002612 ORTHO05D002859 5.7e-07 58.2 122 36.1
Thecc.05G171700 Theobroma cacao HOM05D002612 ORTHO05D002859 5.7e-07 58.2 114 33.3
Thhalv10017091m.g Eutrema salsugineum HOM05D002612 ORTHO05D002859 7.5e-07 57.8 92 34.8
Phvul.001G142600 Phaseolus vulgaris HOM05D002612 ORTHO05D002859 9.7e-07 57.4 89 37.1
THA.LOC104802604 Tarenaya hassleriana HOM05D002612 ORTHO05D002859 9.7e-07 57.4 106 34.9
Glyma.19G148000 Glycine max HOM05D002612 ORTHO05D002859 1.7e-06 56.6 99 38.4
Nn2g15693 Nelumbo nucifera HOM05D002612 ORTHO05D002859 1.7e-06 56.6 86 32.6
HanXRQChr01g0009751 Helianthus annuus HOM05D002612 ORTHO05D002859 2.2e-06 56.2 82 39.0
Duzib106G0243 Durio zibethinus HOM05D002612 ORTHO05D002859 3.7e-06 55.5 91 36.3
SalBow6G0399 Salvia bowleyana HOM05D002612 ORTHO05D002859 4.8e-06 55.1 74 39.2
SalBow6G1620 Salvia bowleyana HOM05D002612 ORTHO05D002859 4.8e-06 55.1 74 39.2
Duzib128G1439 Durio zibethinus HOM05D002612 ORTHO05D002859 6.3e-06 54.7 91 36.3
EL10Ac3g06912 Beta vulgaris HOM05D002612 ORTHO05D002859 8.2e-06 54.3 103 35.9


User provided reference genes

Program Settings