Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2183 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 1.9e-30 135.2 68 100.0
CDE11G0018 Ceratophyllum demersum HOM05D007149 ORTHO05D008956 5.5e-30 133.7 67 98.5
Solyc02g063085.1 Solanum lycopersicum HOM05D007149 ORTHO05D008956 3.9e-28 127.5 67 94.0
Actinidia36312 Actinidia chinensis HOM05D007149 ORTHO05D008956 8.8e-28 126.3 67 91.0
Peaxi162Scf00501g00121 Petunia axillaris HOM05D007149 ORTHO05D008956 1.5e-27 125.6 67 92.5
CAN.G953.15 Capsicum annuum HOM05D007149 ORTHO05D008956 2.0e-27 125.2 67 91.0
Actinidia15873 Actinidia chinensis HOM05D007149 ORTHO05D008956 3.3e-27 124.4 67 89.6
Nn4g23775 Nelumbo nucifera HOM05D007149 ORTHO05D008956 3.3e-27 124.4 67 89.6
Cc07_g08920 Coffea canephora HOM05D007149 ORTHO05D008956 5.7e-27 123.6 67 91.0
PGR004G0481 Punica granatum HOM05D007149 ORTHO05D008956 7.4e-27 123.2 66 89.4
Sabra17G0093700 Salix brachista HOM05D007149 ORTHO05D008956 9.7e-27 122.9 67 86.6
Cpa.g.sc179.16 Carica papaya HOM05D007149 ORTHO05D008956 1.3e-26 122.5 67 88.1
Hma1.2p1_0550F.1_g177300 Hydrangea macrophylla HOM05D007149 ORTHO05D008956 1.3e-26 122.5 67 88.1
vmacro05569 Vaccinium macrocarpon HOM05D007149 ORTHO05D008956 1.3e-26 122.5 67 88.1
CSS0003707 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 1.7e-26 122.1 67 86.6
Duzib133G0440 Durio zibethinus HOM05D007149 ORTHO05D008956 1.7e-26 122.1 67 86.6
Thecc.04G136400 Theobroma cacao HOM05D007149 ORTHO05D008956 1.7e-26 122.1 67 86.6
Cfa007939 Carpinus fangiana HOM05D007149 ORTHO05D008956 2.8e-26 121.3 67 86.6
Haze_14138 Corylus avellana HOM05D007149 ORTHO05D008956 2.8e-26 121.3 67 86.6
Gohir.A07G071500 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.7e-26 120.9 67 83.6
Gohir.D07G076000 Gossypium hirsutum HOM05D007149 ORTHO05D008956 3.7e-26 120.9 67 83.6
Gorai.001G080200 Gossypium raimondii HOM05D007149 ORTHO05D008956 3.7e-26 120.9 67 83.6
Manes.01G108800 Manihot esculenta HOM05D007149 ORTHO05D008956 3.7e-26 120.9 67 85.1
Ca_13737_v3 Cicer arietinum L. HOM05D007149 ORTHO05D008956 4.8e-26 120.6 67 88.1
CSS0003918 Camellia sinensis var. sinensis HOM05D007149 ORTHO05D008956 6.3e-26 120.2 67 85.1
COL.COLO4_16183 Corchorus olitorius HOM05D007149 ORTHO05D008956 6.3e-26 120.2 67 86.6
Sc11g0008240 Simmondsia chinensis HOM05D007149 ORTHO05D008956 1.4e-25 119.0 67 85.1
Aqoxy3G03934 Aquilegia oxysepala HOM05D007149 ORTHO05D008956 1.8e-25 118.6 66 87.9
Dinv34841 Davidia involucrata HOM05D007149 ORTHO05D008956 1.8e-25 118.6 67 86.6
CiPaw.04G040600 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.4e-25 118.2 67 85.1
Potri.017G113401 Populus trichocarpa HOM05D007149 ORTHO05D008956 2.4e-25 118.2 67 83.6
ATR0665G039 Amborella trichopoda HOM05D007149 ORTHO05D008956 3.1e-25 117.9 67 85.1
Migut.H00206 Erythranthe guttata HOM05D007149 ORTHO05D008956 3.1e-25 117.9 67 85.1
CANSAT64G1005 Cannabis sativa HOM05D007149 ORTHO05D008956 4.1e-25 117.5 67 83.6
PSO782G5258 Papaver somniferum HOM05D007149 ORTHO05D008956 4.1e-25 117.5 67 83.6
FvH4_6g45250 Fragaria vesca HOM05D007149 ORTHO05D008956 5.3e-25 117.1 67 80.6
FAN09G4869 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.3e-25 117.1 67 80.6
FAN14G5255 Fragaria x ananassa HOM05D007149 ORTHO05D008956 5.3e-25 117.1 67 80.6
Lalb_Chr04g0257361 Lupinus albus HOM05D007149 ORTHO05D008956 5.3e-25 117.1 67 85.1
RcHm_v2.0_Chr2g0162971 Rosa chinensis HOM05D007149 ORTHO05D008956 5.3e-25 117.1 67 80.6
Aa31LG11G13550 Aethionema arabicum HOM05D007149 ORTHO05D008956 7.0e-25 116.7 66 86.4
Ah.10g037580 Amaranthus hybridus HOM05D007149 ORTHO05D008956 7.0e-25 116.7 67 83.6
Ciclev10013207m.g Citrus clementina HOM05D007149 ORTHO05D008956 7.0e-25 116.7 67 83.6
Os03g0257900 Oryza sativa ssp. japonica HOM05D007149 ORTHO05D008956 7.0e-25 116.7 67 85.1
Atru.chr8.867 Acer truncatum HOM05D007149 ORTHO05D008956 9.1e-25 116.3 66 84.8
Eucgr.J01478 Eucalyptus grandis HOM05D007149 ORTHO05D008956 9.1e-25 116.3 66 86.4
Lj2g0020616 Lotus japonicus HOM05D007149 ORTHO05D008956 9.1e-25 116.3 66 83.3
Zm00001eb011230 Zea mays HOM05D007149 ORTHO05D008956 9.1e-25 116.3 67 85.1
EL10Ac2g04594 Beta vulgaris HOM05D007149 ORTHO05D008956 1.2e-24 115.9 67 82.1
SHI30170 Sapria himalayana HOM05D007149 ORTHO05D008956 1.2e-24 115.9 67 82.1
Hund13727 Selenicereus undatus HOM05D007149 ORTHO05D008956 1.2e-24 115.9 67 82.1
TWI74G0718 Tripterygium wilfordii HOM05D007149 ORTHO05D008956 1.2e-24 115.9 67 80.6
Phvul.004G064400 Phaseolus vulgaris HOM05D007149 ORTHO05D008956 1.6e-24 115.5 67 79.1
Psat1g079040 Pisum sativum HOM05D007149 ORTHO05D008956 2.0e-24 115.2 67 82.1
CiPaw.03G060400 Carya illinoinensis HOM05D007149 ORTHO05D008956 2.6e-24 114.8 66 84.8
PSO063G3907 Papaver somniferum HOM05D007149 ORTHO05D008956 2.6e-24 114.8 67 82.1
THA.LOC104803005 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 3.5e-24 114.4 67 82.1
Glyma.19G046200 Glycine max HOM05D007149 ORTHO05D008956 4.5e-24 114.0 67 79.1
Lsat_1_v5_gn_3_78860 Lactuca sativa HOM05D007149 ORTHO05D008956 4.5e-24 114.0 67 83.6
SalBow3G3356 Salvia bowleyana HOM05D007149 ORTHO05D008956 4.5e-24 114.0 67 82.1
HanXRQChr12g0376461 Helianthus annuus HOM05D007149 ORTHO05D008956 7.7e-24 113.2 66 83.3
MD07G1095900 Malus domestica HOM05D007149 ORTHO05D008956 7.7e-24 113.2 67 80.6
MD17G1105000 Malus domestica HOM05D007149 ORTHO05D008956 7.7e-24 113.2 67 80.6
QL02p051591 Quercus lobata HOM05D007149 ORTHO05D008956 7.7e-24 113.2 67 82.1
GSVIVG01031069001 Vitis vinifera HOM05D007149 ORTHO05D008956 7.7e-24 113.2 67 80.6
DCAR_017207 Daucus carota HOM05D007149 ORTHO05D008956 1.0e-23 112.8 67 80.6
Sp6g28070 Schrenkiella parvula HOM05D007149 ORTHO05D008956 1.0e-23 112.8 66 83.3
THA.LOC104827153 Tarenaya hassleriana HOM05D007149 ORTHO05D008956 1.0e-23 112.8 67 80.6
TPR.G32450 Trifolium pratense HOM05D007149 ORTHO05D008956 1.0e-23 112.8 67 83.6
HPP92_011090 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.3e-23 112.5 67 80.6
HPP92_011107 Vanilla planifolia HOM05D007149 ORTHO05D008956 1.3e-23 112.5 67 80.6
Medtr0024s0060 Medicago truncatula HOM05D007149 ORTHO05D008956 1.7e-23 112.1 65 84.6
BcaB08g36883 Brassica carinata HOM05D007149 ORTHO05D008956 2.2e-23 111.7 66 81.8
BcaC04g18912 Brassica carinata HOM05D007149 ORTHO05D008956 2.2e-23 111.7 66 81.8
A10p23000 Brassica napus HOM05D007149 ORTHO05D008956 2.2e-23 111.7 66 81.8
C09p60970 Brassica napus HOM05D007149 ORTHO05D008956 2.2e-23 111.7 66 81.8
BolC9t58944H Brassica oleracea HOM05D007149 ORTHO05D008956 2.2e-23 111.7 66 81.8
BraA10t44369Z Brassica rapa HOM05D007149 ORTHO05D008956 2.2e-23 111.7 66 81.8
Thhalv10015129m.g Eutrema salsugineum HOM05D007149 ORTHO05D008956 2.9e-23 111.3 66 81.8
unitig_899.g14509 Utricularia gibba HOM05D007149 ORTHO05D008956 2.9e-23 111.3 67 80.6
AL6G26940 Arabidopsis lyrata HOM05D007149 ORTHO05D008956 6.5e-23 110.2 66 80.3
CARHR197250 Cardamine hirsuta HOM05D007149 ORTHO05D008956 6.5e-23 110.2 66 80.3
ClCG11G005400 Citrullus lanatus HOM05D007149 ORTHO05D008956 1.1e-22 109.4 66 80.3
CsaV3_5G039180 Cucumis sativus L. HOM05D007149 ORTHO05D008956 1.1e-22 109.4 66 80.3
AT5G16060 Arabidopsis thaliana HOM05D007149 ORTHO05D008956 1.5e-22 109.0 66 78.8
MELO3C022093.2 Cucumis melo HOM05D007149 ORTHO05D008956 1.5e-22 109.0 66 78.8
FAN09G3419 Fragaria x ananassa HOM05D007149 ORTHO05D008956 1.9e-22 108.6 78 69.2
Carub.0006s1425 Capsella rubella HOM05D007149 ORTHO05D008956 2.5e-22 108.2 66 78.8
Carub.0055s0008 Capsella rubella HOM05D007149 ORTHO05D008956 2.5e-22 108.2 66 78.8
Sed0025185 Sechium edule HOM05D007149 ORTHO05D008956 5.5e-22 107.1 67 76.1
FAN02G3200 Fragaria x ananassa HOM05D007149 ORTHO05D008956 8.0e-21 103.2 79 64.6
PGSC0003DMG400024179 Solanum tuberosum HOM05D007149 ORTHO05D008956 8.8e-20 99.8 51 92.2
Nn3g17784 Nelumbo nucifera HOM05D007149 ORTHO05D008956 1.5e-19 99.0 51 90.2
arahy.Tifrunner.gnm1.ann1.2T9F1Z Arachis hypogaea HOM05D007149 ORTHO05D008956 6.3e-18 93.6 55 80.0
arahy.Tifrunner.gnm1.ann1.HVR4ZG Arachis hypogaea HOM05D007149 ORTHO05D008956 6.3e-18 93.6 55 80.0
Sopen02g014160 Solanum pennellii HOM05D007149 ORTHO05D008956 4.1e-17 90.9 44 95.5
Aa31LG2G17140 Aethionema arabicum HOM05D007149 ORTHO05D008956 9.1e-17 89.7 49 85.7
Nitab4.5_0001569g0020 Nicotiana tabacum HOM05D007149 ORTHO05D008956 2.0e-16 88.6 48 83.3
AagrBONN_evm.TU.Sc2ySwM_228.1220 Anthoceros agrestis HOM05D007149 ORTHO05D008956 4.5e-16 87.4 63 63.5
RcHm_v2.0_Chr2g0163021 Rosa chinensis HOM05D007149 ORTHO05D008956 2.2e-15 85.1 67 64.2
SGA_v2.0_scaffold33G13472 Striga asiatica HOM05D007149 ORTHO05D008956 2.5e-14 81.6 44 81.8
Pp3c20_17910 Physcomitrium patens HOM05D007149 ORTHO05D008956 3.2e-14 81.3 67 59.7
Prupe.3G238900 Prunus persica HOM05D007149 ORTHO05D008956 1.6e-13 79.0 44 79.5
SMO356G0237 Selaginella moellendorffii HOM05D007149 ORTHO05D008956 1.6e-13 79.0 59 62.7
ECA246G4376 Erigeron canadensis HOM05D007149 ORTHO05D008956 3.6e-13 77.8 43 81.4
SalBow6G3599 Salvia bowleyana HOM05D007149 ORTHO05D008956 4.7e-13 77.4 44 77.3
AUR62014527 Chenopodium quinoa HOM05D007149 ORTHO05D008956 3.0e-12 74.7 44 75.0
Mapoly0073s0075 Marchantia polymorpha HOM05D007149 ORTHO05D008956 2.4e-09 65.1 44 63.6
MCO15G246 Micromonas commoda HOM05D007149 ORTHO05D008956 1.7e-07 58.9 56 50.0
Nitab4.5_0002288g0070 Nicotiana tabacum HOM05D007149 ORTHO05D008956 1.7e-07 58.9 36 83.3
PRCOL_00003753 Prasinoderma coloniale HOM05D007149 ORTHO05D008956 7.2e-06 53.5 55 47.3


User provided reference genes

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