Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2179 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 4.1e-119 431.4 218 100.0
CDE05G1868 Ceratophyllum demersum HOM05D007251 ORTHO05D009266 8.9e-90 334.0 226 80.5
Nn8g40494 Nelumbo nucifera HOM05D007251 ORTHO05D009266 1.2e-49 200.7 232 51.7
CSS0035408 Camellia sinensis var. sinensis HOM05D007251 ORTHO05D009266 2.0e-49 199.9 239 51.5
Aqoxy7G03087 Aquilegia oxysepala HOM05D007251 ORTHO05D009266 1.3e-48 197.2 236 49.2
Dinv18148 Davidia involucrata HOM05D007251 ORTHO05D009266 1.2e-46 190.7 233 48.9
TAR626G1006 Trochodendron aralioides HOM05D007251 ORTHO05D009266 2.1e-46 189.9 230 49.6
CsaV3_3G047120 Cucumis sativus L. HOM05D007251 ORTHO05D009266 1.3e-45 187.2 172 55.2
TPR.G12085 Trifolium pratense HOM05D007251 ORTHO05D009266 1.8e-45 186.8 212 51.4
Haze_21751 Corylus avellana HOM05D007251 ORTHO05D009266 8.7e-45 184.5 227 47.6
PSO063G0176 Papaver somniferum HOM05D007251 ORTHO05D009266 8.7e-45 184.5 222 47.7
PSO782G5553 Papaver somniferum HOM05D007251 ORTHO05D009266 8.7e-45 184.5 222 48.2
VMungo0647G2138 Vigna mungo HOM05D007251 ORTHO05D009266 1.5e-44 183.7 188 53.2
MELO3C003624.2 Cucumis melo HOM05D007251 ORTHO05D009266 2.5e-44 183.0 212 48.6
Nitab4.5_0000502g0130 Nicotiana tabacum HOM05D007251 ORTHO05D009266 2.5e-44 183.0 166 57.2
Eucgr.C02018 Eucalyptus grandis HOM05D007251 ORTHO05D009266 3.3e-44 182.6 190 53.2
Gohir.D05G066800 Gossypium hirsutum HOM05D007251 ORTHO05D009266 4.3e-44 182.2 195 53.8
Gorai.009G067600 Gossypium raimondii HOM05D007251 ORTHO05D009266 4.3e-44 182.2 199 53.3
Sopen08g022660 Solanum pennellii HOM05D007251 ORTHO05D009266 4.3e-44 182.2 247 45.3
ATR0580G362 Amborella trichopoda HOM05D007251 ORTHO05D009266 7.4e-44 181.4 226 50.0
CiPaw.08G020100 Carya illinoinensis HOM05D007251 ORTHO05D009266 7.4e-44 181.4 192 52.1
Gohir.A05G064200 Gossypium hirsutum HOM05D007251 ORTHO05D009266 7.4e-44 181.4 203 52.2
RcHm_v2.0_Chr6g0305021 Rosa chinensis HOM05D007251 ORTHO05D009266 9.6e-44 181.0 192 50.5
CAN.G908.8 Capsicum annuum HOM05D007251 ORTHO05D009266 1.3e-43 180.6 166 58.4
Phvul.001G059500 Phaseolus vulgaris HOM05D007251 ORTHO05D009266 1.3e-43 180.6 171 57.3
GSVIVG01035517001 Vitis vinifera HOM05D007251 ORTHO05D009266 1.3e-43 180.6 231 47.6
FAN20G1154 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.6e-43 180.3 210 48.6
Nitab4.5_0002023g0010 Nicotiana tabacum HOM05D007251 ORTHO05D009266 2.1e-43 179.9 166 57.8
Solyc08g069010.4 Solanum lycopersicum HOM05D007251 ORTHO05D009266 2.1e-43 179.9 247 45.7
BcaC03g13325 Brassica carinata HOM05D007251 ORTHO05D009266 2.8e-43 179.5 166 56.6
A02p00600 Brassica napus HOM05D007251 ORTHO05D009266 2.8e-43 179.5 166 57.8
BraA02t05043Z Brassica rapa HOM05D007251 ORTHO05D009266 2.8e-43 179.5 166 57.8
Sed0014514 Sechium edule HOM05D007251 ORTHO05D009266 2.8e-43 179.5 193 50.3
BolC2t06419H Brassica oleracea HOM05D007251 ORTHO05D009266 4.8e-43 178.7 166 56.6
AUR62020596 Chenopodium quinoa HOM05D007251 ORTHO05D009266 4.8e-43 178.7 176 51.7
FvH4_2g36670 Fragaria vesca HOM05D007251 ORTHO05D009266 4.8e-43 178.7 188 51.6
Thecc.09G007500 Theobroma cacao HOM05D007251 ORTHO05D009266 4.8e-43 178.7 202 52.0
C02p04590 Brassica napus HOM05D007251 ORTHO05D009266 8.2e-43 177.9 166 56.0
FAN15G3149 Fragaria x ananassa HOM05D007251 ORTHO05D009266 1.4e-42 177.2 188 51.6
MBI16_g41809_MAGBIO Magnolia biondii HOM05D007251 ORTHO05D009266 1.4e-42 177.2 209 51.7
Prupe.1G459800 Prunus persica HOM05D007251 ORTHO05D009266 1.4e-42 177.2 192 49.5
Sp6g32780 Schrenkiella parvula HOM05D007251 ORTHO05D009266 1.8e-42 176.8 166 57.2
arahy.Tifrunner.gnm1.ann1.5WJ9LU Arachis hypogaea HOM05D007251 ORTHO05D009266 5.3e-42 175.3 171 53.8
arahy.Tifrunner.gnm1.ann1.ULFK5V Arachis hypogaea HOM05D007251 ORTHO05D009266 5.3e-42 175.3 171 53.8
QL12p025168 Quercus lobata HOM05D007251 ORTHO05D009266 6.9e-42 174.9 230 44.3
Duzib168G1420 Durio zibethinus HOM05D007251 ORTHO05D009266 9.0e-42 174.5 188 51.6
Thhalv10013072m.g Eutrema salsugineum HOM05D007251 ORTHO05D009266 2.6e-41 172.9 214 48.6
Medtr1g009650 Medicago truncatula HOM05D007251 ORTHO05D009266 2.6e-41 172.9 198 51.0
Psat6g032880 Pisum sativum HOM05D007251 ORTHO05D009266 2.6e-41 172.9 187 52.4
Manes.16G135400 Manihot esculenta HOM05D007251 ORTHO05D009266 3.4e-41 172.6 180 50.0
Aa31LG3G16450 Aethionema arabicum HOM05D007251 ORTHO05D009266 5.9e-41 171.8 166 55.4
DCAR_003023 Daucus carota HOM05D007251 ORTHO05D009266 5.9e-41 171.8 193 48.7
BcaB05g21499 Brassica carinata HOM05D007251 ORTHO05D009266 7.6e-41 171.4 193 52.8
COL.COLO4_19030 Corchorus olitorius HOM05D007251 ORTHO05D009266 1.0e-40 171.0 171 53.8
Migut.E01424 Erythranthe guttata HOM05D007251 ORTHO05D009266 1.0e-40 171.0 166 54.2
Ah.11g043880 Amaranthus hybridus HOM05D007251 ORTHO05D009266 1.7e-40 170.2 192 47.4
TWI34G2010 Tripterygium wilfordii HOM05D007251 ORTHO05D009266 1.7e-40 170.2 167 52.7
FAN27G2253 Fragaria x ananassa HOM05D007251 ORTHO05D009266 2.2e-40 169.9 200 48.5
SGA_v2.0_scaffold121G33030 Striga asiatica HOM05D007251 ORTHO05D009266 2.9e-40 169.5 180 49.4
ClCG05G017600 Citrullus lanatus HOM05D007251 ORTHO05D009266 3.8e-40 169.1 188 48.4
SalBow8G3910 Salvia bowleyana HOM05D007251 ORTHO05D009266 3.8e-40 169.1 166 53.0
Hund03293 Selenicereus undatus HOM05D007251 ORTHO05D009266 3.8e-40 169.1 176 50.0
AT5G10690 Arabidopsis thaliana HOM05D007251 ORTHO05D009266 6.5e-40 168.3 166 54.2
Potri.006G273400 Populus trichocarpa HOM05D007251 ORTHO05D009266 6.5e-40 168.3 207 46.4
Glyma.14G134800 Glycine max HOM05D007251 ORTHO05D009266 8.5e-40 167.9 159 57.2
MD08G1128000 Malus domestica HOM05D007251 ORTHO05D009266 8.5e-40 167.9 188 47.9
AL6G21210 Arabidopsis lyrata HOM05D007251 ORTHO05D009266 1.1e-39 167.5 166 54.2
CARHR202630 Cardamine hirsuta HOM05D007251 ORTHO05D009266 1.1e-39 167.5 166 53.6
SalBow8G5364 Salvia bowleyana HOM05D007251 ORTHO05D009266 1.4e-39 167.2 166 53.0
EL10Ac2g03759 Beta vulgaris HOM05D007251 ORTHO05D009266 2.5e-39 166.4 166 50.0
Lalb_Chr24g0402511 Lupinus albus HOM05D007251 ORTHO05D009266 2.5e-39 166.4 167 55.7
Sabra06G0211800 Salix brachista HOM05D007251 ORTHO05D009266 4.2e-39 165.6 188 48.9
Cpa.g.sc23.18 Carica papaya HOM05D007251 ORTHO05D009266 9.3e-39 164.5 196 50.5
Actinidia06425 Actinidia chinensis HOM05D007251 ORTHO05D009266 1.2e-38 164.1 171 52.6
Cfa013277 Carpinus fangiana HOM05D007251 ORTHO05D009266 3.6e-38 162.5 189 48.7
Zm00001eb099850 Zea mays HOM05D007251 ORTHO05D009266 3.0e-37 159.5 220 46.4
Atru.BG.4.p Acer truncatum HOM05D007251 ORTHO05D009266 2.5e-36 156.4 145 56.6
Peaxi162Scf00288g00912 Petunia axillaris HOM05D007251 ORTHO05D009266 1.6e-35 153.7 146 55.5
Lj7C750G16 Lonicera japonica HOM05D007251 ORTHO05D009266 6.9e-34 148.3 140 53.6
Os09g0431600 Oryza sativa ssp. japonica HOM05D007251 ORTHO05D009266 9.1e-34 147.9 174 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4143 Anthoceros agrestis HOM05D007251 ORTHO05D009266 2.7e-30 136.3 170 45.3
Pp3c8_4280 Physcomitrium patens HOM05D007251 ORTHO05D009266 6.7e-29 131.7 170 41.2
Glyma.17G197900 Glycine max HOM05D007251 ORTHO05D009266 2.0e-28 130.2 130 53.8
Ca_12854_v3 Cicer arietinum L. HOM05D007251 ORTHO05D009266 4.8e-27 125.6 127 53.5
Mapoly0043s0002 Marchantia polymorpha HOM05D007251 ORTHO05D009266 3.1e-26 122.9 172 41.3
Oeu019776.1 Olea europaea HOM05D007251 ORTHO05D009266 3.1e-26 122.9 127 52.0
AUR62009072 Chenopodium quinoa HOM05D007251 ORTHO05D009266 5.3e-26 122.1 127 48.8
CBR_g20311 Chara braunii HOM05D007251 ORTHO05D009266 1.2e-25 120.9 162 42.6
CANSAT56G3637 Cannabis sativa HOM05D007251 ORTHO05D009266 7.2e-23 111.7 127 47.2
SMO137G0044 Selaginella moellendorffii HOM05D007251 ORTHO05D009266 3.9e-21 105.9 153 38.6
Ciclev10010499m.g Citrus clementina HOM05D007251 ORTHO05D009266 2.9e-16 89.7 147 39.5
Cfa019806 Carpinus fangiana HOM05D007251 ORTHO05D009266 3.7e-11 72.8 56 66.1
CiPaw.01G062100 Carya illinoinensis HOM05D007251 ORTHO05D009266 6.3e-11 72.0 53 64.2
TAR636G1232 Trochodendron aralioides HOM05D000282 ORTHO05D000272 6.3e-11 72.0 58 60.3
TAR629G1521 Trochodendron aralioides HOM05D002023 ORTHO05D002049 3.1e-10 69.7 44 70.5
Actinidia22253 Actinidia chinensis HOM05D007251 ORTHO05D009266 6.5e-08 62.0 92 43.5
Zm00001eb263120 Zea mays HOM05D007251 ORTHO05D009266 8.5e-08 61.6 57 61.4


User provided reference genes

Program Settings