Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2160 Ceratophyllum demersum HOM05D005165 ORTHO05D006361 0.0e+00 2281.1 1152 100.0
MBI02_g22104_MAGBIO Magnolia biondii HOM05D005165 ORTHO05D006361 1.0e-245 854.4 1460 37.7
Nn1g03565 Nelumbo nucifera HOM05D005165 ORTHO05D006361 2.4e-242 843.2 1366 38.9
Cfa000241 Carpinus fangiana HOM05D005165 ORTHO05D006361 1.3e-235 820.8 1407 38.2
Dinv13878 Davidia involucrata HOM05D005165 ORTHO05D006361 3.3e-228 796.2 1519 35.8
Lj2C270G14 Lonicera japonica HOM05D005165 ORTHO05D006361 3.7e-227 792.7 1334 37.6
Hund23483 Selenicereus undatus HOM05D005165 ORTHO05D006361 8.2e-227 791.6 1327 38.3
Manes.17G037700 Manihot esculenta HOM05D005165 ORTHO05D006361 3.8e-224 782.7 1351 37.0
TAR627G0931 Trochodendron aralioides HOM05D005165 ORTHO05D006361 6.5e-224 781.9 1359 37.8
Prupe.4G023200 Prunus persica HOM05D005165 ORTHO05D006361 5.5e-223 778.9 1374 37.6
COL.COLO4_31753 Corchorus olitorius HOM05D005165 ORTHO05D006361 1.6e-222 777.3 1281 38.6
QL05p073800 Quercus lobata HOM05D005165 ORTHO05D006361 3.0e-221 773.1 1485 35.6
Oeu063907.1 Olea europaea HOM05D005165 ORTHO05D006361 9.8e-220 768.1 1340 36.5
Aqoxy1G03259 Aquilegia oxysepala HOM05D005165 ORTHO05D006361 6.3e-219 765.4 1373 37.7
PSO541G6479 Papaver somniferum HOM05D005165 ORTHO05D006361 5.4e-218 762.3 1394 36.8
vmacro03694 Vaccinium macrocarpon HOM05D005165 ORTHO05D006361 7.0e-218 761.9 1421 35.7
DCAR_004209 Daucus carota HOM05D005165 ORTHO05D006361 1.2e-217 761.1 1337 37.3
Ciclev10014034m.g Citrus clementina HOM05D005165 ORTHO05D006361 1.6e-217 760.8 1346 36.6
arahy.Tifrunner.gnm1.ann1.FU33AK Arachis hypogaea HOM05D005165 ORTHO05D006361 9.5e-215 751.5 1477 34.9
Cc09_g01850 Coffea canephora HOM05D005165 ORTHO05D006361 1.2e-214 751.1 1392 35.8
PSO675G7058 Papaver somniferum HOM05D005165 ORTHO05D006361 1.6e-214 750.7 1381 36.3
PGR004G2872 Punica granatum HOM05D005165 ORTHO05D006361 1.6e-214 750.7 1279 38.2
Haze_06780 Corylus avellana HOM05D005165 ORTHO05D006361 3.6e-214 749.6 1435 36.6
CsaV3_1G010870 Cucumis sativus L. HOM05D005165 ORTHO05D006361 4.7e-214 749.2 1360 36.7
Nitab4.5_0007482g0050 Nicotiana tabacum HOM05D005165 ORTHO05D006361 1.0e-213 748.0 1369 36.7
FvH4_3g02340 Fragaria vesca HOM05D005165 ORTHO05D006361 2.3e-213 746.9 1377 36.3
Potri.004G017500 Populus trichocarpa HOM05D005165 ORTHO05D006361 3.0e-213 746.5 1506 34.2
RcHm_v2.0_Chr5g0003561 Rosa chinensis HOM05D005165 ORTHO05D006361 1.2e-212 744.6 1407 35.4
Duzib235G1549 Durio zibethinus HOM05D005165 ORTHO05D006361 3.4e-212 743.0 1389 36.3
Migut.M01303 Erythranthe guttata HOM05D005165 ORTHO05D006361 7.5e-212 741.9 1368 36.3
Rhsim13G0155600 Rhododendron simsii HOM05D005165 ORTHO05D006361 7.5e-212 741.9 1423 35.3
Sed0027912 Sechium edule HOM05D005165 ORTHO05D006361 2.2e-211 740.3 1344 37.4
MD10G1319300 Malus domestica HOM05D005165 ORTHO05D006361 1.2e-209 734.6 1428 36.0
Lalb_Chr01g0014921 Lupinus albus HOM05D005165 ORTHO05D006361 1.3e-208 731.1 1466 34.7
Gohir.D06G153700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 1.7e-208 730.7 1319 37.1
ClCG03G004830 Citrullus lanatus HOM05D005165 ORTHO05D006361 2.9e-208 729.9 1371 36.3
CANSAT56G1527 Cannabis sativa HOM05D005165 ORTHO05D006361 3.8e-208 729.6 1474 34.2
Thecc.06G218200 Theobroma cacao HOM05D005165 ORTHO05D006361 5.0e-208 729.2 1426 35.3
Gorai.010G179700 Gossypium raimondii HOM05D005165 ORTHO05D006361 8.6e-208 728.4 1321 37.0
arahy.Tifrunner.gnm1.ann1.K6JFDD Arachis hypogaea HOM05D005165 ORTHO05D006361 1.1e-207 728.0 1482 34.1
Ca_21091_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 1.1e-207 728.0 1381 34.5
Ca_30199_v3 Cicer arietinum L. HOM05D005165 ORTHO05D006361 1.5e-207 727.6 1382 34.4
AUR62021974 Chenopodium quinoa HOM05D005165 ORTHO05D006361 3.3e-207 726.5 1263 37.5
Sc17g0007260 Simmondsia chinensis HOM05D005165 ORTHO05D006361 4.3e-207 726.1 1319 36.8
Sabra04G0009600 Salix brachista HOM05D005165 ORTHO05D006361 2.1e-206 723.8 1517 33.6
Lj4g0017916 Lotus japonicus HOM05D005165 ORTHO05D006361 2.3e-205 720.3 1383 35.4
AUR62012682 Chenopodium quinoa HOM05D005165 ORTHO05D006361 8.9e-205 718.4 1254 37.4
Medtr4g131940 Medicago truncatula HOM05D005165 ORTHO05D006361 1.7e-203 714.1 1490 33.4
Sp7g19990 Schrenkiella parvula HOM05D005165 ORTHO05D006361 4.9e-203 712.6 1296 37.0
arahy.Tifrunner.gnm1.ann1.QZ1TNI Arachis hypogaea HOM05D005165 ORTHO05D006361 3.2e-202 709.9 1506 33.9
BcaNung02250 Brassica carinata HOM05D005165 ORTHO05D006361 4.1e-202 709.5 1345 35.7
Nitab4.5_0003254g0110 Nicotiana tabacum HOM05D005165 ORTHO05D006361 5.4e-202 709.1 1476 34.2
Glyma.17G014900 Glycine max HOM05D005165 ORTHO05D006361 2.0e-201 707.2 1550 33.2
SGA_v2.0_scaffold4G01924 Striga asiatica HOM05D005165 ORTHO05D006361 2.0e-201 707.2 1351 34.9
Phvul.003G077600 Phaseolus vulgaris HOM05D005165 ORTHO05D006361 7.8e-201 705.3 1541 33.1
HanXRQChr05g0129591 Helianthus annuus HOM05D005165 ORTHO05D006361 2.3e-200 703.7 1408 34.5
Psat4g007280 Pisum sativum HOM05D005165 ORTHO05D006361 6.6e-200 702.2 1481 33.4
CSS0001066 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.5e-199 701.0 1523 33.7
BcaC09g51197 Brassica carinata HOM05D005165 ORTHO05D006361 1.9e-199 700.7 1345 35.6
Carub.0007s1958 Capsella rubella HOM05D005165 ORTHO05D006361 1.9e-199 700.7 1292 36.8
Peaxi162Scf00262g00611 Petunia axillaris HOM05D005165 ORTHO05D006361 5.6e-199 699.1 1369 36.2
TPR.G37081 Trifolium pratense HOM05D005165 ORTHO05D006361 7.3e-199 698.7 1593 31.8
unitig_748.g7100 Utricularia gibba HOM05D005165 ORTHO05D006361 3.6e-198 696.4 1199 37.9
Sopen02g025090 Solanum pennellii HOM05D005165 ORTHO05D006361 6.2e-198 695.7 1510 33.0
A01p13150 Brassica napus HOM05D005165 ORTHO05D006361 1.4e-197 694.5 1326 35.3
AT4G21820 Arabidopsis thaliana HOM05D005165 ORTHO05D006361 1.8e-197 694.1 1306 36.3
Glyma.07G259400 Glycine max HOM05D005165 ORTHO05D006361 1.7e-195 687.6 1530 33.1
C01p15840 Brassica napus HOM05D005165 ORTHO05D006361 3.7e-195 686.4 1371 34.9
CARHR228530 Cardamine hirsuta HOM05D005165 ORTHO05D006361 8.3e-195 685.3 1254 37.1
MELO3C002466.2 Cucumis melo HOM05D005165 ORTHO05D006361 7.0e-194 682.2 1412 34.8
Thhalv10024235m.g Eutrema salsugineum HOM05D005165 ORTHO05D006361 7.0e-194 682.2 1277 36.7
TWI63G0677 Tripterygium wilfordii HOM05D005165 ORTHO05D006361 1.6e-193 681.0 1541 32.3
BolC1t01538H Brassica oleracea HOM05D005165 ORTHO05D006361 6.0e-193 679.1 1362 35.1
BraA01t01259Z Brassica rapa HOM05D005165 ORTHO05D006361 3.0e-192 676.8 1346 34.8
THA.LOC104813036 Tarenaya hassleriana HOM05D005165 ORTHO05D006361 3.7e-187 659.8 1438 32.7
GSVIVG01002377001 Vitis vinifera HOM05D005165 ORTHO05D006361 4.0e-181 639.8 915 42.6
FAN21G3214 Fragaria x ananassa HOM05D005165 ORTHO05D006361 6.8e-181 639.0 1320 35.0
ECA236G1313 Erigeron canadensis HOM05D005165 ORTHO05D006361 2.6e-180 637.1 1361 32.8
CSS0020297 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 1.1e-178 631.7 1276 35.0
Aa31LG6G3830 Aethionema arabicum HOM05D005165 ORTHO05D006361 1.9e-178 630.9 1299 34.6
EL10Ac8g20027 Beta vulgaris HOM05D005165 ORTHO05D006361 7.8e-177 625.5 1241 35.5
Atru.chr10.2199 Acer truncatum HOM05D005165 ORTHO05D006361 7.3e-175 619.0 1451 32.3
CiPaw.09G089900 Carya illinoinensis HOM05D005165 ORTHO05D006361 9.9e-172 608.6 671 50.5
FAN25G1001 Fragaria x ananassa HOM05D005165 ORTHO05D006361 3.8e-171 606.7 1415 32.5
MSTRG.15978 Avicennia marina HOM05D005165 ORTHO05D006361 2.3e-168 597.4 1009 37.9
Gohir.D10G013600 Gossypium hirsutum HOM05D005165 ORTHO05D006361 2.5e-167 594.0 1798 28.4
Solyc02g080390.2 Solanum lycopersicum HOM05D005165 ORTHO05D006361 1.4e-162 578.2 983 38.1
Gohir.A06G147800 Gossypium hirsutum HOM05D005165 ORTHO05D006361 1.8e-160 571.2 1021 37.4
AL7G32110 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 1.6e-158 564.7 1153 34.9
Ah.09g235020 Amaranthus hybridus HOM05D005165 ORTHO05D006361 3.8e-147 526.9 1260 32.0
Eucgr.D01308 Eucalyptus grandis HOM05D005165 ORTHO05D006361 8.4e-147 525.8 975 35.7
Lsat_1_v5_gn_7_17620 Lactuca sativa HOM05D005165 ORTHO05D006361 1.1e-143 515.4 632 46.5
ATR0752G018 Amborella trichopoda HOM05D005165 ORTHO05D006361 8.2e-142 509.2 654 45.0
Zm00001eb322760 Zea mays HOM05D005165 ORTHO05D006361 9.4e-138 495.7 1422 29.7
Cpa.g.sc198.36 Carica papaya HOM05D005165 ORTHO05D006361 1.0e-136 492.3 513 52.0
HPP92_012319 Vanilla planifolia HOM05D005165 ORTHO05D006361 1.5e-132 478.4 668 44.8
VMungo1215G1456 Vigna mungo HOM05D005165 ORTHO05D000002 2.5e-130 471.1 568 46.8
CSS0012929 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 2.3e-128 464.5 1196 31.4
Gorai.011G015400 Gossypium raimondii HOM05D005165 ORTHO05D006361 2.9e-123 447.6 1166 30.5
Actinidia05522 Actinidia chinensis HOM05D005165 ORTHO05D006361 5.9e-116 423.3 1244 27.6
HPP92_012397 Vanilla planifolia HOM05D005165 ORTHO05D006361 6.5e-115 419.9 1283 29.3
QL05p073557 Quercus lobata HOM05D005165 ORTHO05D006361 6.3e-94 350.1 416 49.5
SEGI_37992 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 9.5e-90 336.3 531 37.5
AagrBONN_evm.TU.Sc2ySwM_117.1637__1638 Anthoceros agrestis HOM05D005165 ORTHO05D006361 9.8e-79 299.7 1403 24.6
Mapoly0043s0047 Marchantia polymorpha HOM05D005165 ORTHO05D006361 3.2e-77 294.7 856 28.4
Pp3c24_1350 Physcomitrium patens HOM05D005165 ORTHO05D006361 3.2e-77 294.7 755 29.9
SEGI_21682 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 2.3e-72 278.5 294 45.2
SMO200G0122 Selaginella moellendorffii HOM05D005165 ORTHO05D006361 3.2e-69 268.1 1357 23.4
CiPaw.09G090000 Carya illinoinensis HOM05D005165 ORTHO05D006361 1.3e-67 262.7 481 36.0
Cpa.g.sc198.37 Carica papaya HOM05D005165 ORTHO05D006361 1.7e-67 262.3 827 27.4
CSS0017164 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 2.8e-65 255.0 540 34.3
FAN21G2432 Fragaria x ananassa HOM05D005165 ORTHO05D006361 3.8e-62 244.6 449 34.1
GSVIVG01004517001 Vitis vinifera HOM05D005165 ORTHO05D006361 8.7e-59 233.4 430 36.3
Gohir.A10G013700 Gossypium hirsutum HOM05D005165 ORTHO05D006361 2.8e-57 228.4 484 33.1
Lsat_1_v5_gn_7_17640 Lactuca sativa HOM05D005165 ORTHO05D006361 6.2e-57 227.3 267 45.7
MSTRG.15979 Avicennia marina HOM05D005165 ORTHO05D006361 4.3e-50 204.5 265 41.1
SEGI_17063 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 4.9e-46 191.0 333 37.5
PGSC0003DMG400016486 Solanum tuberosum HOM05D005165 ORTHO05D006361 1.6e-44 186.0 221 46.2
SEGI_30095 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 6.2e-41 174.1 660 26.5
CSS0021361 Camellia sinensis var. sinensis HOM05D005165 ORTHO05D006361 8.1e-41 173.7 237 41.4
GSVIVG01002955001 Vitis vinifera HOM05D005165 ORTHO05D006361 4.3e-34 151.4 149 53.0
ATR0752G007 Amborella trichopoda HOM05D005165 ORTHO05D006361 5.6e-34 151.0 200 41.0
CBR_g12408 Chara braunii HOM05D000019 ORTHO05D000048 8.4e-30 137.1 587 24.7
Solyc02g080400.3 Solanum lycopersicum HOM05D005165 ORTHO05D006361 5.5e-29 134.4 151 47.0
CAN.G569.18 Capsicum annuum HOM05D005165 ORTHO05D006361 3.9e-27 128.3 126 50.0
SEGI_19133 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 4.3e-26 124.8 234 32.9
PRCOL_00000773 Prasinoderma coloniale HOM05D005165 ORTHO05D006361 2.2e-22 112.5 325 25.8
SHI14112 Sapria himalayana HOM05D005165 ORTHO05D006361 1.8e-19 102.8 100 53.0
SGA_v2.0_scaffold186G40236 Striga asiatica HOM05D005165 ORTHO05D006361 2.3e-19 102.4 154 37.7
HPP92_012318 Vanilla planifolia HOM05D005165 ORTHO05D006361 2.5e-18 99.0 193 32.1
SEGI_29404 Sequoiadendron giganteum HOM05D005165 ORTHO05D006361 6.3e-17 94.4 552 24.1
AL7G32100 Arabidopsis lyrata HOM05D005165 ORTHO05D006361 1.4e-16 93.2 94 51.1
HanXRQChr07g0198521 Helianthus annuus HOM05D005165 ORTHO05D006361 1.8e-16 92.8 73 61.6
MCO03G113 Micromonas commoda HOM05D005165 ORTHO05D006361 2.4e-16 92.4 188 31.4
FAN25G2437 Fragaria x ananassa HOM05D005165 ORTHO05D006361 1.3e-14 86.7 109 49.5
SHI34979 Sapria himalayana HOM05D005165 ORTHO05D006361 3.2e-13 82.0 160 34.4
Cre06.g281200 Chlamydomonas reinhardtii HOM05D005165 ORTHO05D006361 7.4e-10 70.9 241 25.3
Cfa022813 Carpinus fangiana HOM05D005165 ORTHO05D006361 2.9e-06 58.9 197 29.4


User provided reference genes

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