Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2149 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 3.3e-79 298.5 172 100.0
CDE05G3297 Ceratophyllum demersum HOM05D003374 ORTHO05D009470 3.5e-65 251.9 172 88.4
FAN23G1041 Fragaria x ananassa HOM05D003374 ORTHO05D009470 3.3e-31 139.0 130 56.9
FAN26G1101 Fragaria x ananassa HOM05D003374 ORTHO05D009470 4.3e-31 138.7 130 56.9
FAN28G2426 Fragaria x ananassa HOM05D003374 ORTHO05D009470 5.7e-31 138.3 130 56.9
Potri.005G107800 Populus trichocarpa HOM05D003374 ORTHO05D009470 9.7e-31 137.5 144 52.8
FvH4_1g11080 Fragaria vesca HOM05D003374 ORTHO05D009470 3.7e-30 135.6 130 56.9
RcHm_v2.0_Chr2g0098351 Rosa chinensis HOM05D003374 ORTHO05D009470 8.2e-30 134.4 131 57.3
Dinv08548 Davidia involucrata HOM05D003374 ORTHO05D009470 1.1e-29 134.0 128 56.2
MD15G1237400 Malus domestica HOM05D003374 ORTHO05D009470 2.4e-29 132.9 141 52.5
Prupe.7G175000 Prunus persica HOM05D003374 ORTHO05D009470 4.1e-29 132.1 134 51.5
Hma1.2p1_0315F.1_g122600 Hydrangea macrophylla HOM05D003374 ORTHO05D009470 9.0e-29 131.0 139 49.6
Ciclev10026638m.g Citrus clementina HOM05D003374 ORTHO05D009470 1.2e-28 130.6 131 54.2
QL06p052079 Quercus lobata HOM05D003374 ORTHO05D009470 2.0e-28 129.8 128 52.3
Sabra05G0088300 Salix brachista HOM05D003374 ORTHO05D009470 2.0e-28 129.8 131 52.7
MBI09_g46000_MAGBIO Magnolia biondii HOM05D003374 ORTHO05D009470 1.7e-27 126.7 132 50.0
Thecc.01G011500 Theobroma cacao HOM05D003374 ORTHO05D009470 1.7e-27 126.7 132 53.8
TAR625G1139 Trochodendron aralioides HOM05D003374 ORTHO05D009470 3.8e-27 125.6 129 52.7
CiPaw.08G125800 Carya illinoinensis HOM05D003374 ORTHO05D009470 8.5e-27 124.4 135 51.1
Gohir.A02G174300 Gossypium hirsutum HOM05D003374 ORTHO05D009470 8.5e-27 124.4 128 54.7
Cfa007029 Carpinus fangiana HOM05D003374 ORTHO05D009470 2.5e-26 122.9 144 47.2
Haze_03703 Corylus avellana HOM05D003374 ORTHO05D009415 3.2e-26 122.5 146 48.6
FAN19G0939 Fragaria x ananassa HOM05D003374 ORTHO05D009470 3.2e-26 122.5 143 51.0
Gohir.D03G005500 Gossypium hirsutum HOM05D003374 ORTHO05D009470 3.2e-26 122.5 133 54.9
Gorai.003G005900 Gossypium raimondii HOM05D003374 ORTHO05D009470 3.2e-26 122.5 133 54.9
Lj2g0014457 Lotus japonicus HOM05D003374 ORTHO05D009470 4.2e-26 122.1 131 49.6
PSO675G4674 Papaver somniferum HOM05D003374 ORTHO05D009470 4.2e-26 122.1 119 54.6
vmacro20496 Vaccinium macrocarpon HOM05D003374 ORTHO05D009470 4.2e-26 122.1 132 50.0
Nitab4.5_0006892g0010 Nicotiana tabacum HOM05D003374 ORTHO05D009470 5.5e-26 121.7 130 49.2
TWI73G0454 Tripterygium wilfordii HOM05D003374 ORTHO05D009470 5.5e-26 121.7 142 47.2
Eucgr.I02305 Eucalyptus grandis HOM05D003374 ORTHO05D009470 1.2e-25 120.6 134 49.3
PSO541G4788 Papaver somniferum HOM05D003374 ORTHO05D009470 1.2e-25 120.6 119 53.8
Phvul.002G104800 Phaseolus vulgaris HOM05D003374 ORTHO05D009470 1.2e-25 120.6 132 48.5
Manes.02G110400 Manihot esculenta HOM05D003374 ORTHO05D009470 1.6e-25 120.2 129 50.4
Nitab4.5_0002105g0080 Nicotiana tabacum HOM05D003374 ORTHO05D009470 2.1e-25 119.8 130 48.5
Rhsim10G0205800 Rhododendron simsii HOM05D003374 ORTHO05D009470 2.7e-25 119.4 134 51.5
Atru.chr3.907 Acer truncatum HOM05D003374 ORTHO05D009470 3.6e-25 119.0 129 50.4
Duzib145G0002 Durio zibethinus HOM05D003374 ORTHO05D009470 3.6e-25 119.0 131 54.2
Ca_24942_v3 Cicer arietinum L. HOM05D003374 ORTHO05D009470 4.6e-25 118.6 137 47.4
Cpa.g.sc6.313 Carica papaya HOM05D003374 ORTHO05D009470 6.1e-25 118.2 139 48.9
Medtr5g022970 Medicago truncatula HOM05D003374 ORTHO05D009470 1.3e-24 117.1 138 47.1
Cc07_g11310 Coffea canephora HOM05D003374 ORTHO05D009470 1.8e-24 116.7 144 47.2
Cc08_g04880 Coffea canephora HOM05D003374 ORTHO05D009470 1.8e-24 116.7 144 47.2
PGR102G2171 Punica granatum HOM05D003374 ORTHO05D009470 1.8e-24 116.7 145 49.0
CANSAT01G1253 Cannabis sativa HOM05D003374 ORTHO05D009470 2.3e-24 116.3 135 48.1
VMungo1215G1047 Vigna mungo HOM05D003374 ORTHO05D009470 3.0e-24 115.9 130 46.9
PGSC0003DMG400003663 Solanum tuberosum HOM05D003374 ORTHO05D009470 5.1e-24 115.2 131 51.9
CSS0026426 Camellia sinensis var. sinensis HOM05D003374 ORTHO05D009415 6.7e-24 114.8 132 49.2
CAN.G890.28 Capsicum annuum HOM05D003374 ORTHO05D009470 6.7e-24 114.8 129 49.6
Glyma.11G080800 Glycine max HOM05D003374 ORTHO05D009470 1.1e-23 114.0 139 46.8
Peaxi162Scf00328g00118 Petunia axillaris HOM05D003374 ORTHO05D009470 2.5e-23 112.8 130 49.2
Sopen02g028160 Solanum pennellii HOM05D003374 ORTHO05D009470 2.5e-23 112.8 131 50.4
Lalb_Chr09g0321441 Lupinus albus HOM05D003374 ORTHO05D009470 2.8e-22 109.4 137 43.1
Glyma.01G162500 Glycine max HOM05D003374 ORTHO05D009470 1.8e-21 106.7 129 45.0
Lalb_Chr05g0212181 Lupinus albus HOM05D003374 ORTHO05D009470 1.8e-21 106.7 139 46.0
EL10Ac9g21336 Beta vulgaris HOM05D003374 ORTHO05D009470 3.1e-21 105.9 129 49.6
Potri.005G107900 Populus trichocarpa HOM05D003374 ORTHO05D009470 1.5e-20 103.6 118 44.1
C07p05580 Brassica napus HOM05D003374 ORTHO05D009470 2.6e-20 102.8 130 47.7
BcaC06g36303 Brassica carinata HOM05D003374 ORTHO05D009470 3.4e-20 102.4 130 46.9
Sp3g31120 Schrenkiella parvula HOM05D003374 ORTHO05D009470 4.5e-20 102.1 130 47.7
BcaB03g16544 Brassica carinata HOM05D003374 ORTHO05D009470 7.7e-20 101.3 130 46.9
BraA07t28128Z Brassica rapa HOM05D003374 ORTHO05D009470 7.7e-20 101.3 130 46.9
MSTRG.22233 Avicennia marina HOM05D003374 ORTHO05D009470 1.3e-19 100.5 121 42.1
Thhalv10022897m.g Eutrema salsugineum HOM05D003374 ORTHO05D009470 1.3e-19 100.5 130 46.2
GSVIVG01005193001 Vitis vinifera HOM05D003374 ORTHO05D009470 5.0e-19 98.6 106 51.9
BcaB08g34755 Brassica carinata HOM05D003374 ORTHO05D009470 8.5e-19 97.8 130 46.9
BolC7t40958H Brassica oleracea HOM05D003374 ORTHO05D009415 8.5e-19 97.8 132 47.0
Aa31LG8G14990 Aethionema arabicum HOM05D003374 ORTHO05D009470 1.1e-18 97.4 120 45.8
MSTRG.24362 Avicennia marina HOM05D003374 ORTHO05D009470 1.1e-18 97.4 121 45.5
Carub.0003s3182 Capsella rubella HOM05D003374 ORTHO05D009470 1.4e-18 97.1 130 45.4
AUR62012999 Chenopodium quinoa HOM05D003374 ORTHO05D009470 1.4e-18 97.1 121 43.8
AT2G17710 Arabidopsis thaliana HOM05D003374 ORTHO05D009470 2.5e-18 96.3 130 46.9
BcaC01g02894 Brassica carinata HOM05D003374 ORTHO05D009470 2.5e-18 96.3 130 46.2
C03p58640 Brassica napus HOM05D003374 ORTHO05D009470 2.5e-18 96.3 130 46.2
BolC3t18125H Brassica oleracea HOM05D003374 ORTHO05D009470 2.5e-18 96.3 130 46.2
Migut.N02761 Erythranthe guttata HOM05D003374 ORTHO05D009470 3.2e-18 95.9 119 42.0
THA.LOC104819731 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 5.5e-18 95.1 133 42.9
AL3G50710 Arabidopsis lyrata HOM05D003374 ORTHO05D009470 1.2e-17 94.0 130 46.2
A06p33690 Brassica napus HOM05D003374 ORTHO05D009470 1.6e-17 93.6 130 45.4
BraA06t26303Z Brassica rapa HOM05D003374 ORTHO05D009470 1.6e-17 93.6 130 45.4
CARHR108000 Cardamine hirsuta HOM05D003374 ORTHO05D009470 1.6e-17 93.6 130 46.9
THA.LOC104804280 Tarenaya hassleriana HOM05D003374 ORTHO05D009470 1.8e-16 90.1 143 40.6
Duzib147G0965 Durio zibethinus HOM05D003374 ORTHO05D009470 6.7e-16 88.2 114 47.4
Aqoxy6G01986 Aquilegia oxysepala HOM05D003374 ORTHO05D009470 8.8e-16 87.8 97 48.5
SalBow6G5967 Salvia bowleyana HOM05D003374 ORTHO05D009470 2.0e-15 86.7 99 45.5
Actinidia22937 Actinidia chinensis HOM05D003374 ORTHO05D009470 1.7e-14 83.6 122 41.0
SalBow8G5385 Salvia bowleyana HOM05D003374 ORTHO05D009470 1.7e-14 83.6 99 42.4
Hund00012 Selenicereus undatus HOM05D003374 ORTHO05D009470 1.7e-14 83.6 96 47.9
Oeu022073.1 Olea europaea HOM05D003374 ORTHO05D009470 1.4e-13 80.5 118 40.7
arahy.Tifrunner.gnm1.ann1.HG61QK Arachis hypogaea HOM05D003374 ORTHO05D009470 2.4e-13 79.7 97 47.4
arahy.Tifrunner.gnm1.ann1.YP763J Arachis hypogaea HOM05D003374 ORTHO05D009470 2.4e-13 79.7 97 47.4
TPR.G20269 Trifolium pratense HOM05D003374 ORTHO05D009470 1.5e-12 77.0 90 50.0
Sc18g0006270 Simmondsia chinensis HOM05D003374 ORTHO05D009470 5.9e-12 75.1 85 47.1
Solyc02g083380.3 Solanum lycopersicum HOM05D003374 ORTHO05D009470 7.7e-12 74.7 75 54.7
unitig_578.g16135 Utricularia gibba HOM05D003374 ORTHO05D009470 1.7e-11 73.6 93 43.0
A07p03300 Brassica napus HOM05D003374 ORTHO05D009415 7.2e-10 68.2 92 47.8
AUR62010008 Chenopodium quinoa HOM05D003374 ORTHO05D010386 2.1e-09 66.6 75 45.3
COL.COLO4_22495 Corchorus olitorius HOM05D003374 ORTHO05D009470 8.8e-08 61.2 83 42.2
Duzib145G0007 Durio zibethinus HOM05D003374 ORTHO05D009470 8.8e-08 61.2 71 47.9
Actinidia17405 Actinidia chinensis HOM05D000373 ORTHO05D001763 5.7e-07 58.5 70 45.7
Ah.01g008140 Amaranthus hybridus HOM05D003374 ORTHO05D009470 9.7e-07 57.8 93 45.2


User provided reference genes

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