Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 7.2e-203 710.3 342 100.0
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 1.8e-84 317.0 303 54.8
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 1.5e-83 313.9 327 50.8
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 2.8e-82 309.7 312 52.9
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 3.7e-82 309.3 304 51.6
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 4.8e-82 308.9 309 50.8
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 4.8e-82 308.9 295 53.6
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 1.1e-81 307.8 300 53.3
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 1.1e-81 307.8 300 53.3
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 5.9e-80 302.0 302 50.0
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 1.0e-79 301.2 298 50.3
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 1.3e-79 300.8 292 53.1
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 2.9e-79 299.7 304 51.0
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 5.0e-79 298.9 306 49.7
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 1.4e-78 297.4 317 47.6
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 1.9e-78 297.0 350 46.9
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 3.2e-78 296.2 329 48.3
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 1.2e-77 294.3 288 50.3
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 2.7e-77 293.1 295 49.2
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 3.6e-77 292.7 322 47.5
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 3.6e-77 292.7 303 49.5
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 3.6e-77 292.7 354 45.8
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 3.6e-77 292.7 302 50.3
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 6.1e-77 292.0 301 47.5
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 6.1e-77 292.0 297 49.8
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 6.1e-77 292.0 306 49.0
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 1.0e-76 291.2 292 51.0
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 1.4e-76 290.8 301 47.5
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 1.8e-76 290.4 310 48.7
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 1.8e-76 290.4 301 50.2
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 3.9e-76 289.3 297 46.8
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 5.2e-76 288.9 305 47.5
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 5.2e-76 288.9 302 47.4
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 6.7e-76 288.5 303 47.9
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 8.8e-76 288.1 301 47.5
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 8.8e-76 288.1 313 47.6
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 1.1e-75 287.7 304 48.4
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 1.1e-75 287.7 317 46.4
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 1.1e-75 287.7 304 46.7
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 1.5e-75 287.3 299 48.8
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 3.3e-75 286.2 306 49.3
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 5.7e-75 285.4 305 49.2
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 7.4e-75 285.0 292 52.1
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 7.4e-75 285.0 302 47.7
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 9.7e-75 284.6 303 47.2
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 9.7e-75 284.6 304 49.0
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 2.8e-74 283.1 307 47.6
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 2.8e-74 283.1 327 43.7
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 2.8e-74 283.1 300 49.0
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 3.7e-74 282.7 295 51.5
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 6.3e-74 282.0 306 47.1
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 1.4e-73 280.8 302 47.7
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 3.1e-73 279.6 305 47.5
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 4.1e-73 279.3 302 48.0
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 4.1e-73 279.3 333 43.5
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 5.3e-73 278.9 304 47.4
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 5.3e-73 278.9 295 46.8
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 5.3e-73 278.9 297 49.5
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 3.5e-72 276.2 297 49.8
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 4.5e-72 275.8 330 44.2
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 1.0e-71 274.6 304 46.7
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 1.7e-71 273.9 329 44.7
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 8.5e-71 271.6 329 44.4
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 1.9e-70 270.4 300 46.7
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 2.5e-70 270.0 310 43.9
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 3.2e-70 269.6 326 44.2
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 3.2e-70 269.6 318 45.3
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 2.7e-69 266.5 304 45.7
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 8.0e-69 265.0 332 42.2
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 3.0e-68 263.1 302 46.4
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 3.0e-68 263.1 299 46.8
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 4.0e-68 262.7 274 48.5
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 6.7e-68 261.9 257 49.8
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 2.0e-67 260.4 327 43.1
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 2.0e-67 260.4 298 46.0
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 4.4e-67 259.2 296 46.6
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 7.5e-67 258.5 280 48.6
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 7.5e-67 258.5 319 43.9
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 9.7e-67 258.1 278 46.4
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 3.7e-66 256.1 296 45.9
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 3.7e-66 256.1 293 45.1
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 6.3e-66 255.4 355 42.0
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 1.6e-64 250.8 314 41.1
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 7.7e-64 248.4 276 46.0
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 2.2e-63 246.9 295 43.4
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 1.1e-62 244.6 316 43.4
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 4.7e-61 239.2 297 43.1
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 2.6e-59 233.4 303 43.2
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 1.3e-58 231.1 228 52.2
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 1.2e-56 224.6 189 57.7
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 1.6e-56 224.2 239 47.7
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 2.0e-56 223.8 355 38.9
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 3.5e-56 223.0 236 47.5
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 8.6e-55 218.4 236 46.6
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 2.5e-54 216.9 312 42.0
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 8.0e-53 211.8 377 34.7
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 3.7e-50 203.0 294 39.1
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 1.4e-49 201.1 231 45.5
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 1.8e-49 200.7 304 40.1
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 3.1e-49 199.9 366 38.3
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 8.6e-47 191.8 340 35.6
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 8.0e-45 185.3 217 46.1
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 2.0e-43 180.6 217 45.6
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 1.9e-38 164.1 383 32.9
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 1.2e-35 154.8 263 36.1
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 1.7e-34 151.0 163 46.6
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.3e-26 124.8 106 53.8
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.7e-26 124.4 164 42.7
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 1.9e-22 110.9 325 29.8
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 3.3e-22 110.2 215 32.6
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 2.3e-15 87.4 86 48.8
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 1.6e-13 81.3 104 44.2
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 3.3e-06 57.0 123 32.5


User provided reference genes

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