Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2099 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 8.5e-201 703.4 330 100.0
CDE05G2073 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 1.3e-193 679.5 330 95.5
vmacro00468 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 5.7e-173 610.9 329 84.8
COL.COLO4_27669 Corchorus olitorius HOM05D003778 ORTHO05D004418 7.5e-173 610.5 329 85.1
Rhsim09G0073500 Rhododendron simsii HOM05D003778 ORTHO05D004418 7.5e-173 610.5 329 85.1
TAR629G2113 Trochodendron aralioides HOM05D003778 ORTHO05D004418 3.7e-172 608.2 329 83.3
PGR004G0624 Punica granatum HOM05D003778 ORTHO05D004418 6.3e-172 607.4 330 83.3
Thecc.02G311500 Theobroma cacao HOM05D003778 ORTHO05D004418 6.3e-172 607.4 329 84.2
Rhsim09G0073400 Rhododendron simsii HOM05D003778 ORTHO05D004418 8.2e-172 607.1 329 84.8
Gohir.A13G026100 Gossypium hirsutum HOM05D003778 ORTHO05D004418 1.1e-171 606.7 330 83.6
TAR035G0003 Trochodendron aralioides HOM05D003778 ORTHO05D004418 1.1e-171 606.7 329 83.0
Haze_11725 Corylus avellana HOM05D003778 ORTHO05D004418 1.4e-171 606.3 329 83.9
Atru.chr11.1231 Acer truncatum HOM05D003778 ORTHO05D004418 5.3e-171 604.4 329 84.5
Atru.chr11.1319 Acer truncatum HOM05D003778 ORTHO05D004418 5.3e-171 604.4 329 84.5
CANSAT78G1874 Cannabis sativa HOM05D003778 ORTHO05D004418 7.0e-171 604.0 329 83.6
SalBow8G3862 Salvia bowleyana HOM05D003778 ORTHO05D004418 7.0e-171 604.0 330 84.5
Gohir.D13G024700 Gossypium hirsutum HOM05D003778 ORTHO05D004418 9.1e-171 603.6 330 83.0
Lj3g0022719 Lotus japonicus HOM05D003778 ORTHO05D004418 9.1e-171 603.6 329 83.9
Dinv17604 Davidia involucrata HOM05D003778 ORTHO05D004418 1.2e-170 603.2 329 83.3
MD16G1000400 Malus domestica HOM05D003778 ORTHO05D004418 2.0e-170 602.4 329 83.3
Prupe.1G345300 Prunus persica HOM05D003778 ORTHO05D004418 2.7e-170 602.1 329 83.6
Gorai.013G027900 Gossypium raimondii HOM05D003778 ORTHO05D004418 3.5e-170 601.7 330 82.7
Potri.008G084800 Populus trichocarpa HOM05D003778 ORTHO05D004418 3.5e-170 601.7 328 83.8
SalBow2G0375 Salvia bowleyana HOM05D003778 ORTHO05D004418 4.5e-170 601.3 330 84.2
MD13G1007700 Malus domestica HOM05D003778 ORTHO05D004418 5.9e-170 600.9 329 83.0
Sabra08G0063000 Salix brachista HOM05D003778 ORTHO05D004418 7.7e-170 600.5 330 83.3
MBI03_g24012_MAGBIO Magnolia biondii HOM05D003778 ORTHO05D004418 1.7e-169 599.4 329 82.7
Actinidia04080 Actinidia chinensis HOM05D003778 ORTHO05D004418 2.2e-169 599.0 329 83.0
arahy.Tifrunner.gnm1.ann1.G65HTE Arachis hypogaea HOM05D003778 ORTHO05D004418 2.9e-169 598.6 329 83.0
Migut.M01947 Erythranthe guttata HOM05D003778 ORTHO05D004418 2.9e-169 598.6 324 83.0
Lalb_Chr01g0001531 Lupinus albus HOM05D003778 ORTHO05D004418 2.9e-169 598.6 329 83.9
Potri.010G170000 Populus trichocarpa HOM05D003778 ORTHO05D004418 2.9e-169 598.6 328 83.8
SGA_v2.0_scaffold223G42894 Striga asiatica HOM05D003778 ORTHO05D004418 2.9e-169 598.6 328 83.8
Glyma.11G103500 Glycine max HOM05D003778 ORTHO05D004418 3.8e-169 598.2 329 83.6
Phvul.011G031700 Phaseolus vulgaris HOM05D003778 ORTHO05D004418 3.8e-169 598.2 329 84.2
TPR.G21559 Trifolium pratense HOM05D003778 ORTHO05D004418 8.5e-169 597.0 329 83.3
VMungo1127G1615 Vigna mungo HOM05D003778 ORTHO05D004418 1.1e-168 596.7 329 83.3
Sabra10G0129800 Salix brachista HOM05D003778 ORTHO05D004418 1.5e-168 596.3 328 83.8
CSS0038233 Camellia sinensis var. sinensis HOM05D003778 ORTHO05D004418 1.9e-168 595.9 329 82.7
TWI77G0069 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 2.5e-168 595.5 329 81.8
TWI74G0502 Tripterygium wilfordii HOM05D003778 ORTHO05D004418 3.2e-168 595.1 329 82.7
ATR0618G344 Amborella trichopoda HOM05D003778 ORTHO05D004418 5.5e-168 594.3 329 82.4
DCAR_002565 Daucus carota HOM05D003778 ORTHO05D004418 5.5e-168 594.3 329 82.4
CiPaw.06G057600 Carya illinoinensis HOM05D003778 ORTHO05D004418 9.4e-168 593.6 329 82.7
DCAR_030405 Daucus carota HOM05D003778 ORTHO05D004418 1.6e-167 592.8 329 82.1
Duzib248G0532 Durio zibethinus HOM05D003778 ORTHO05D004418 1.6e-167 592.8 330 82.7
Nitab4.5_0000265g0030 Nicotiana tabacum HOM05D003778 ORTHO05D004418 1.6e-167 592.8 318 83.6
QL03p043582 Quercus lobata HOM05D003778 ORTHO05D004418 2.1e-167 592.4 329 81.8
Cc09_g06490 Coffea canephora HOM05D003778 ORTHO05D004418 2.7e-167 592.0 327 82.3
Solyc02g030170.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 2.7e-167 592.0 316 84.5
Sopen02g009490 Solanum pennellii HOM05D003778 ORTHO05D004418 2.7e-167 592.0 316 84.5
Eucgr.J00851 Eucalyptus grandis HOM05D003778 ORTHO05D004418 3.6e-167 591.7 329 81.5
Sc06g0007850 Simmondsia chinensis HOM05D003778 ORTHO05D004418 4.7e-167 591.3 329 83.0
Lalb_Chr03g0024881 Lupinus albus HOM05D003778 ORTHO05D004418 6.1e-167 590.9 329 83.0
Psat7g174000 Pisum sativum HOM05D003778 ORTHO05D004418 1.0e-166 590.1 329 82.7
CAN.G79.46 Capsicum annuum HOM05D003778 ORTHO05D004418 1.4e-166 589.7 318 83.6
Manes.03G081200 Manihot esculenta HOM05D003778 ORTHO05D004418 2.3e-166 589.0 327 82.0
MSTRG.16322 Avicennia marina HOM05D003778 ORTHO05D004418 3.0e-166 588.6 330 82.4
Ciclev10030984m.g Citrus clementina HOM05D003778 ORTHO05D004418 6.8e-166 587.4 329 83.0
PSO017G4886 Papaver somniferum HOM05D003778 ORTHO05D004418 6.8e-166 587.4 330 81.5
PSO478G4461 Papaver somniferum HOM05D003778 ORTHO05D004418 6.8e-166 587.4 330 81.5
arahy.Tifrunner.gnm1.ann1.J2YHHP Arachis hypogaea HOM05D003778 ORTHO05D004418 1.2e-165 586.6 329 82.1
PGSC0003DMG400011801 Solanum tuberosum HOM05D003778 ORTHO05D004418 1.2e-165 586.6 318 83.0
SEGI_38803 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 3.4e-165 585.1 329 79.9
CsaV3_4G009240 Cucumis sativus L. HOM05D003778 ORTHO05D004418 9.8e-165 583.6 329 79.6
ClCG09G004610 Citrullus lanatus HOM05D003778 ORTHO05D004418 1.3e-164 583.2 327 81.0
MELO3C023603.2 Cucumis melo HOM05D003778 ORTHO05D004418 1.3e-164 583.2 329 79.0
Medtr4g074350 Medicago truncatula HOM05D003778 ORTHO05D004418 1.3e-164 583.2 329 80.5
Peaxi162Scf01123g00017 Petunia axillaris HOM05D003778 ORTHO05D004418 1.3e-164 583.2 328 80.5
ClCG07G016390 Citrullus lanatus HOM05D003778 ORTHO05D004418 3.7e-164 581.6 329 79.6
MELO3C022613.2 Cucumis melo HOM05D003778 ORTHO05D004418 4.8e-164 581.3 329 79.3
Lj6A722T93 Lonicera japonica HOM05D003778 ORTHO05D004418 4.8e-164 581.3 329 81.5
CsaV3_7G030530 Cucumis sativus L. HOM05D003778 ORTHO05D004418 6.3e-164 580.9 329 79.3
Aqoxy3G04278 Aquilegia oxysepala HOM05D003778 ORTHO05D004418 3.1e-163 578.6 329 79.3
Ca_03035_v3 Cicer arietinum L. HOM05D003778 ORTHO05D004418 4.1e-163 578.2 329 80.5
HanXRQChr01g0028571 Helianthus annuus HOM05D003778 ORTHO05D004418 4.1e-163 578.2 330 80.9
Aa31LG8G6590 Aethionema arabicum HOM05D003778 ORTHO05D004418 5.4e-163 577.8 330 80.9
Hund24279 Selenicereus undatus HOM05D003778 ORTHO05D004418 9.1e-163 577.0 316 82.9
Sed0012416 Sechium edule HOM05D003778 ORTHO05D004418 4.5e-162 574.7 329 79.3
AUR62017664 Chenopodium quinoa HOM05D003778 ORTHO05D004418 7.7e-162 573.9 315 82.2
Ah.01g001630 Amaranthus hybridus HOM05D003778 ORTHO05D004418 1.0e-161 573.5 329 79.3
RcHm_v2.0_Chr4g0446441 Rosa chinensis HOM05D003778 ORTHO05D004418 1.0e-161 573.5 333 79.6
THA.LOC104804923 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 1.3e-161 573.2 330 80.3
AUR62015201 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.7e-161 572.8 315 81.9
Sed0007506 Sechium edule HOM05D003778 ORTHO05D004418 1.7e-161 572.8 329 78.4
ECA234G2331 Erigeron canadensis HOM05D003778 ORTHO05D004418 2.3e-161 572.4 322 82.0
Sp3g17830 Schrenkiella parvula HOM05D003778 ORTHO05D004418 6.6e-161 570.9 330 80.0
Thhalv10020412m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 1.1e-160 570.1 330 80.0
FvH4_4g36730 Fragaria vesca HOM05D003778 ORTHO05D004418 1.5e-160 569.7 333 79.3
FAN07G1289 Fragaria x ananassa HOM05D003778 ORTHO05D004418 2.5e-160 568.9 333 79.3
FAN12G0530 Fragaria x ananassa HOM05D003778 ORTHO05D004418 3.3e-160 568.5 333 79.0
AL3G33330 Arabidopsis lyrata HOM05D003778 ORTHO05D004418 4.2e-160 568.2 330 79.7
Carub.0003s1970 Capsella rubella HOM05D003778 ORTHO05D004418 5.5e-160 567.8 330 79.7
BraA06t23537Z Brassica rapa HOM05D003778 ORTHO05D004418 7.2e-160 567.4 330 79.1
Sp1g37100 Schrenkiella parvula HOM05D003778 ORTHO05D004418 7.2e-160 567.4 330 79.4
BraA05t21813Z Brassica rapa HOM05D003778 ORTHO05D004418 1.2e-159 566.6 330 80.3
BolC5t33208H Brassica oleracea HOM05D003778 ORTHO05D004418 1.6e-159 566.2 330 80.0
AT3G19820 Arabidopsis thaliana HOM05D003778 ORTHO05D004418 2.8e-159 565.5 330 79.4
BcaC05g28402 Brassica carinata HOM05D003778 ORTHO05D004418 2.8e-159 565.5 330 80.0
A01p34930 Brassica napus HOM05D003778 ORTHO05D004418 2.8e-159 565.5 330 79.7
A05p29300 Brassica napus HOM05D003778 ORTHO05D004418 2.8e-159 565.5 330 80.0
C05p44820 Brassica napus HOM05D003778 ORTHO05D004418 2.8e-159 565.5 330 80.0
C01p44340 Brassica napus HOM05D003778 ORTHO05D004418 3.6e-159 565.1 330 79.4
BolC1t04399H Brassica oleracea HOM05D003778 ORTHO05D004418 3.6e-159 565.1 330 79.4
BraA01t03576Z Brassica rapa HOM05D003778 ORTHO05D004418 6.1e-159 564.3 330 79.4
A06p03260 Brassica napus HOM05D003778 ORTHO05D004418 8.0e-159 563.9 330 79.1
CARHR095330 Cardamine hirsuta HOM05D003778 ORTHO05D004418 8.0e-159 563.9 330 79.1
BcaB06g26051 Brassica carinata HOM05D003778 ORTHO05D004418 1.0e-158 563.5 330 79.4
BolC6t35641H Brassica oleracea HOM05D003778 ORTHO05D004418 1.0e-158 563.5 330 78.8
Lsat_1_v5_gn_4_26521 Lactuca sativa HOM05D003778 ORTHO05D004418 1.0e-158 563.5 330 79.4
Zm00001eb228910 Zea mays HOM05D003778 ORTHO05D004418 3.0e-158 562.0 329 79.3
HanXRQChr13g0388101 Helianthus annuus HOM05D003778 ORTHO05D004418 4.0e-158 561.6 329 78.4
BcaC08g43211 Brassica carinata HOM05D003778 ORTHO05D004418 6.8e-158 560.8 330 78.8
Nitab4.5_0008761g0020 Nicotiana tabacum HOM05D003778 ORTHO05D004418 6.8e-158 560.8 318 79.6
Nitab4.5_0001219g0170 Nicotiana tabacum HOM05D003778 ORTHO05D004418 8.9e-158 560.5 329 76.9
Peaxi162Scf00833g00024 Petunia axillaris HOM05D003778 ORTHO05D004418 3.4e-157 558.5 317 78.9
Lj6g0014800 Lotus japonicus HOM05D003778 ORTHO05D004418 5.7e-157 557.8 329 79.0
AUR62018172 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.3e-156 556.6 325 77.8
Solyc02g069490.4 Solanum lycopersicum HOM05D003778 ORTHO05D004418 6.3e-156 554.3 323 77.1
Lj6g0026630 Lotus japonicus HOM05D003778 ORTHO05D004418 8.3e-156 553.9 329 78.7
CAN.G675.20 Capsicum annuum HOM05D003778 ORTHO05D004418 1.8e-155 552.7 316 78.8
FAN17G2175 Fragaria x ananassa HOM05D003778 ORTHO05D004418 2.4e-155 552.4 331 78.2
ECA233G5967 Erigeron canadensis HOM05D003778 ORTHO05D004418 3.1e-155 552.0 329 77.2
EL10Ac9g22920 Beta vulgaris HOM05D003778 ORTHO05D004418 4.1e-155 551.6 332 77.4
Sopen02g018630 Solanum pennellii HOM05D003778 ORTHO05D004418 4.1e-155 551.6 317 77.9
THA.LOC104815230 Tarenaya hassleriana HOM05D003778 ORTHO05D004418 4.1e-155 551.6 330 76.4
Os10g0397400 Oryza sativa ssp. japonica HOM05D003778 ORTHO05D004418 9.2e-155 550.4 327 77.7
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 1.6e-154 549.7 315 79.0
PGSC0003DMG400021142 Solanum tuberosum HOM05D003778 ORTHO05D004418 1.6e-154 549.7 317 77.9
Nn4g24924 Nelumbo nucifera HOM05D003778 ORTHO05D004418 5.9e-154 547.7 293 85.0
CAN.G1362.14 Capsicum annuum HOM05D003778 ORTHO05D004418 3.9e-153 545.0 329 74.8
Lsat_1_v5_gn_8_32421 Lactuca sativa HOM05D003778 ORTHO05D004418 3.9e-153 545.0 329 76.6
Pp3c7_650 Physcomitrium patens HOM05D003778 ORTHO05D004418 7.0e-147 524.2 329 73.9
GSVIVG01010184001 Vitis vinifera HOM05D003778 ORTHO05D004418 7.0e-147 524.2 280 85.4
SMO367G0245 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 9.2e-147 523.9 318 75.2
Oeu008711.1 Olea europaea HOM05D003778 ORTHO05D004418 2.0e-146 522.7 281 84.3
AagrBONN_evm.TU.Sc2ySwM_117.797 Anthoceros agrestis HOM05D003778 ORTHO05D004418 2.7e-146 522.3 329 71.1
Pp3c11_26120 Physcomitrium patens HOM05D003778 ORTHO05D004418 8.6e-145 517.3 329 72.9
Mapoly0190s0010 Marchantia polymorpha HOM05D003778 ORTHO05D004418 8.0e-143 510.8 334 70.1
C06p05320 Brassica napus HOM05D003778 ORTHO05D004418 3.1e-142 508.8 289 79.9
HanXRQChr15g0483641 Helianthus annuus HOM05D003778 ORTHO05D004418 1.9e-139 499.6 335 69.6
Lsat_1_v5_gn_3_32901 Lactuca sativa HOM05D003778 ORTHO05D004418 3.9e-137 491.9 316 71.8
Peaxi162Scf00312g00221 Petunia axillaris HOM05D003778 ORTHO05D004418 5.1e-137 491.5 330 71.2
Peaxi162Scf00695g00218 Petunia axillaris HOM05D003778 ORTHO05D004418 1.1e-136 490.3 330 70.0
unitig_748.g7356 Utricularia gibba HOM05D003778 ORTHO05D004418 1.0e-121 440.7 325 67.4
Mapoly0153s0024 Marchantia polymorpha HOM05D003778 ORTHO05D004418 3.6e-111 405.6 315 58.4
SMO347G0448 Selaginella moellendorffii HOM05D003778 ORTHO05D004418 1.4e-110 403.7 315 59.7
AagrBONN_evm.TU.Sc2ySwM_344.4140 Anthoceros agrestis HOM05D003778 ORTHO05D004418 2.4e-110 402.9 310 57.4
SEGI_20352 Sequoiadendron giganteum HOM05D003778 ORTHO05D004418 6.2e-95 351.7 295 54.6
vmacro10903 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 2.9e-92 342.8 183 84.7
CDE05G1908 Ceratophyllum demersum HOM05D003778 ORTHO05D004418 2.5e-91 339.7 205 82.0
Glyma.12G028300 Glycine max HOM05D003778 ORTHO05D004418 1.0e-89 334.3 184 82.6
Thhalv10012112m.g Eutrema salsugineum HOM05D003778 ORTHO05D004418 2.2e-84 316.6 214 72.4
BcaC08g43207 Brassica carinata HOM05D003778 ORTHO05D004418 3.8e-68 262.7 198 65.2
BolC6t35639H Brassica oleracea HOM05D003778 ORTHO05D004418 1.1e-67 261.2 198 64.6
Nitab4.5_0012697g0010 Nicotiana tabacum HOM05D003778 ORTHO05D004418 8.0e-66 255.0 144 77.8
Nitab4.5_0000876g0110 Nicotiana tabacum HOM05D003778 ORTHO05D004418 2.3e-65 253.4 155 74.2
Zm00001eb190720 Zea mays HOM05D003778 ORTHO05D004418 3.0e-65 253.1 165 70.9
BcaB04g19062 Brassica carinata HOM05D003778 ORTHO05D004418 1.6e-61 240.7 166 68.7
C06p05360 Brassica napus HOM05D003778 ORTHO05D004418 1.7e-60 237.3 131 80.9
vmacro10902 Vaccinium macrocarpon HOM05D003778 ORTHO05D004418 8.5e-52 208.4 121 81.0
CBR_g45591 Chara braunii HOM05D003778 ORTHO05D004418 4.5e-45 186.0 284 35.6
Zm00001eb190730 Zea mays HOM05D003778 ORTHO05D004418 1.7e-44 184.1 128 64.8
Gorai.005G150900 Gossypium raimondii HOM05D003778 ORTHO05D004418 5.8e-32 142.5 87 74.7
PGSC0003DMG400004305 Solanum tuberosum HOM05D003778 ORTHO05D004418 5.0e-28 129.4 90 65.6
HanXRQChr08g0230901 Helianthus annuus HOM05D003778 ORTHO05D004418 1.2e-26 124.8 76 72.4
GSVIVG01033182001 Vitis vinifera HOM05D003778 ORTHO05D008307 2.3e-25 120.6 66 77.3
A03p41410 Brassica napus HOM05D003778 ORTHO05D004418 1.7e-23 114.4 91 56.0
C06p05290 Brassica napus HOM05D003778 ORTHO05D033430 8.6e-20 102.1 103 49.5
BraA03t13295Z Brassica rapa HOM05D003778 ORTHO05D004418 1.5e-11 74.7 46 65.2
Cfa024211 Carpinus fangiana HOM05D003778 ORTHO05D004418 2.5e-11 73.9 196 25.5
BcaC01g03602 Brassica carinata HOM05D003778 ORTHO05D004418 5.6e-11 72.8 62 54.8
Cfa023151 Carpinus fangiana HOM05D003778 ORTHO05D004418 2.4e-09 67.4 319 21.0


User provided reference genes

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