Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 1.0e-94 350.1 182 100.0
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 3.6e-60 235.3 182 67.0
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 3.0e-59 232.3 167 70.7
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 6.8e-59 231.1 174 67.8
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 7.5e-58 227.6 172 67.4
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 1.3e-57 226.9 178 66.3
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 1.8e-56 223.0 182 62.6
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 2.4e-56 222.6 178 62.9
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 2.4e-56 222.6 174 62.6
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 4.1e-56 221.9 163 68.1
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 5.4e-56 221.5 172 66.3
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 9.2e-56 220.7 168 67.9
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 1.6e-55 219.9 176 64.8
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 1.6e-55 219.9 174 63.8
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 2.0e-55 219.5 171 64.9
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 2.7e-55 219.2 167 66.5
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 2.7e-55 219.2 167 64.1
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 4.6e-55 218.4 177 63.8
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 5.9e-55 218.0 171 65.5
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 7.8e-55 217.6 177 62.1
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 1.0e-54 217.2 183 63.9
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 1.3e-54 216.9 183 63.9
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 3.9e-54 215.3 175 60.0
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 5.0e-54 214.9 168 63.7
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 6.6e-54 214.5 178 62.4
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 1.9e-53 213.0 171 62.6
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 1.9e-53 213.0 171 62.6
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 3.3e-53 212.2 181 61.3
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 5.6e-53 211.5 170 64.7
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 7.3e-53 211.1 170 63.5
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 7.3e-53 211.1 178 61.2
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 1.6e-52 209.9 163 65.6
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 2.8e-52 209.1 167 62.9
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 2.8e-52 209.1 182 57.1
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 4.7e-52 208.4 178 60.1
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 6.2e-52 208.0 176 60.8
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 6.2e-52 208.0 163 64.4
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 6.2e-52 208.0 165 63.6
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 6.2e-52 208.0 172 62.2
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 8.0e-52 207.6 182 57.1
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 8.0e-52 207.6 175 58.9
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 1.4e-51 206.8 168 61.3
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 2.3e-51 206.1 183 59.0
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 2.3e-51 206.1 167 59.9
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 2.3e-51 206.1 165 63.0
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 3.1e-51 205.7 167 60.5
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 4.0e-51 205.3 172 59.3
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 5.2e-51 204.9 185 57.8
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 5.2e-51 204.9 175 60.6
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 1.2e-50 203.8 175 58.9
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.5e-50 203.4 165 61.8
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 1.5e-50 203.4 170 62.9
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 2.6e-50 202.6 169 60.4
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 3.4e-50 202.2 177 61.0
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 3.4e-50 202.2 173 62.4
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 4.4e-50 201.8 179 60.9
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 4.4e-50 201.8 181 59.1
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 9.8e-50 200.7 172 58.7
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 9.8e-50 200.7 170 58.8
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 9.8e-50 200.7 168 61.3
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 1.3e-49 200.3 172 58.1
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 1.3e-49 200.3 168 59.5
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 1.7e-49 199.9 170 58.2
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 4.9e-49 198.4 171 59.6
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.9e-48 196.4 175 58.3
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 2.4e-48 196.1 168 61.3
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 5.4e-48 194.9 170 57.6
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 5.4e-48 194.9 170 58.8
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 5.4e-48 194.9 140 69.3
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 7.0e-48 194.5 166 57.8
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 7.0e-48 194.5 181 55.8
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 3.5e-47 192.2 171 57.9
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 3.5e-47 192.2 171 57.9
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 4.6e-47 191.8 143 67.8
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 1.0e-46 190.7 162 58.6
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 1.3e-46 190.3 171 57.3
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 1.3e-46 190.3 171 57.3
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 2.3e-46 189.5 173 53.8
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 3.0e-46 189.1 140 67.1
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 3.0e-46 189.1 162 55.6
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 5.0e-46 188.3 141 66.7
CDE05G0537 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 2.5e-45 186.0 119 83.2
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 9.5e-45 184.1 172 55.2
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 1.2e-44 183.7 168 54.2
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 4.7e-44 181.8 171 56.7
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 6.2e-44 181.4 174 54.0
Os11g0488600 Oryza sativa ssp. japonica HOM05D001420 ORTHO05D009292 1.8e-43 179.9 177 55.9
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 1.5e-42 176.8 148 64.9
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 1.1e-40 170.6 143 61.5
Zm00001eb112760 Zea mays HOM05D001420 ORTHO05D009292 1.9e-40 169.9 194 46.9
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 3.2e-40 169.1 203 47.3
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 9.2e-40 167.5 256 43.0
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 2.1e-39 166.4 118 67.8
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 6.0e-39 164.9 177 49.7
Peaxi162Scf00700g00030 Petunia axillaris HOM05D001420 ORTHO05D009292 7.8e-39 164.5 139 56.8
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 6.6e-38 161.4 165 50.3
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 8.6e-38 161.0 165 51.5
Ciclev10017089m.g Citrus clementina HOM05D001420 ORTHO05D009292 2.1e-36 156.4 129 60.5
RcHm_v2.0_Chr2g0175681 Rosa chinensis HOM05D001420 ORTHO05D009292 2.1e-36 156.4 131 60.3
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 8.9e-35 151.0 143 55.2
Lj7C610G7 Lonicera japonica HOM05D001420 ORTHO05D009292 1.6e-31 140.2 109 61.5
MD16G1254400 Malus domestica HOM05D001420 ORTHO05D009292 4.6e-31 138.7 118 58.5
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 1.9e-29 133.3 139 52.5
CBR_g762 Chara braunii HOM05D001420 ORTHO05D009292 3.4e-26 122.5 164 40.9
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 2.4e-16 89.7 65 66.2
DCAR_021795 Daucus carota HOM05D001420 ORTHO05D009292 3.9e-14 82.4 89 49.4
Cre01.g049050 Chlamydomonas reinhardtii HOM05D001420 ORTHO05D009292 1.4e-11 73.9 150 32.7
Nitab4.5_0000525g0030 Nicotiana tabacum HOM05D001420 ORTHO05D009292 1.7e-09 67.0 42 71.4
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 1.4e-08 63.9 52 61.5
FAN02G0503 Fragaria x ananassa HOM05D001420 ORTHO05D009292 6.0e-07 58.5 59 50.8


User provided reference genes

Program Settings