Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2043 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 6.0e-185 650.6 303 100.0
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.2e-132 476.9 440 57.0
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 1.5e-74 283.9 383 41.0
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 9.9e-71 271.2 431 36.9
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 2.4e-69 266.5 445 35.5
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 2.4e-69 266.5 375 38.7
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 9.2e-69 264.6 369 39.3
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 2.1e-68 263.5 449 35.2
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 2.7e-68 263.1 413 38.0
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 2.7e-68 263.1 368 40.2
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 3.5e-68 262.7 357 40.6
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 3.5e-68 262.7 357 40.6
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 3.5e-68 262.7 394 37.3
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 4.6e-68 262.3 463 36.1
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 4.6e-68 262.3 408 37.5
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 6.0e-68 261.9 369 39.8
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 7.8e-68 261.5 373 39.9
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 7.8e-68 261.5 375 38.1
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 7.8e-68 261.5 413 38.0
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 7.8e-68 261.5 414 36.7
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 1.0e-67 261.2 367 38.7
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 1.3e-67 260.8 429 36.1
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 1.3e-67 260.8 387 38.5
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 1.3e-67 260.8 439 36.0
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 3.0e-67 259.6 372 39.0
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 3.0e-67 259.6 357 39.8
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 3.9e-67 259.2 338 41.7
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 3.9e-67 259.2 372 38.7
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 5.1e-67 258.8 369 38.5
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 5.1e-67 258.8 438 35.4
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 6.6e-67 258.5 434 35.5
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 6.6e-67 258.5 352 40.6
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 6.6e-67 258.5 420 36.4
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 6.6e-67 258.5 372 38.2
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 8.6e-67 258.1 359 39.6
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 8.6e-67 258.1 372 39.2
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 8.6e-67 258.1 372 38.7
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 8.6e-67 258.1 372 37.6
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 8.6e-67 258.1 372 38.4
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 1.1e-66 257.7 370 39.2
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 1.1e-66 257.7 370 38.6
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 1.1e-66 257.7 379 38.3
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.5e-66 257.3 358 39.4
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 4.3e-66 255.8 357 39.8
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 4.3e-66 255.8 374 38.8
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 4.3e-66 255.8 369 39.0
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 5.6e-66 255.4 470 35.7
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 7.3e-66 255.0 358 38.8
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 7.3e-66 255.0 385 37.4
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 7.3e-66 255.0 358 39.4
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 9.5e-66 254.6 357 39.2
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 9.5e-66 254.6 357 39.2
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 9.5e-66 254.6 408 37.5
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 1.2e-65 254.2 357 39.2
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 1.6e-65 253.8 396 36.6
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 1.6e-65 253.8 358 39.4
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.6e-65 253.8 358 38.8
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 1.6e-65 253.8 368 38.6
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 1.6e-65 253.8 404 37.1
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 2.1e-65 253.4 383 37.6
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 2.8e-65 253.1 357 38.9
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 3.6e-65 252.7 357 39.5
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 4.7e-65 252.3 367 39.2
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 1.1e-64 251.1 358 39.7
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 1.1e-64 251.1 416 35.6
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 1.4e-64 250.8 359 38.4
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 1.4e-64 250.8 359 38.4
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 3.1e-64 249.6 358 38.0
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 4.0e-64 249.2 367 38.4
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 5.2e-64 248.8 411 37.0
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 6.8e-64 248.4 437 34.8
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 6.8e-64 248.4 360 38.6
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 8.9e-64 248.1 357 39.2
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 1.2e-63 247.7 358 38.0
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 1.2e-63 247.7 357 38.4
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 2.0e-63 246.9 357 39.2
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 3.4e-63 246.1 383 37.1
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 7.6e-63 245.0 356 38.8
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 7.6e-63 245.0 389 36.8
FAN15G3230 Fragaria x ananassa HOM05D005302 ORTHO05D006422 9.9e-63 244.6 390 36.7
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 1.3e-62 244.2 400 37.0
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 1.7e-62 243.8 357 37.8
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 2.2e-62 243.4 369 37.4
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 3.8e-62 242.7 392 36.0
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 6.4e-62 241.9 356 39.0
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 6.4e-62 241.9 374 36.9
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 1.9e-61 240.4 352 37.5
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 2.4e-61 240.0 357 37.5
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 4.1e-61 239.2 357 37.5
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 5.4e-61 238.8 377 35.3
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 5.4e-61 238.8 280 44.6
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 7.1e-61 238.4 344 39.8
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 9.2e-61 238.0 361 38.2
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 1.2e-60 237.7 403 34.5
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 3.5e-60 236.1 368 36.4
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 3.5e-60 236.1 488 31.6
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 1.7e-59 233.8 281 42.7
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 2.3e-59 233.4 367 36.2
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 5.1e-59 232.3 368 36.4
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 6.2e-57 225.3 365 37.5
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 2.0e-55 220.3 368 36.1
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 8.7e-51 204.9 349 33.5
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 9.6e-50 201.4 366 35.5
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 1.6e-49 200.7 322 37.0
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.2e-47 194.5 244 42.6
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 8.4e-46 188.3 289 36.3
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 1.1e-45 188.0 279 40.5
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 1.4e-45 187.6 303 35.0
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 3.0e-43 179.9 358 31.3
Hma1.2p1_0393F.1_g143090 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.1e-40 171.4 100 76.0
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 3.1e-40 169.9 310 33.2
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 5.8e-39 165.6 311 33.4
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 2.4e-37 160.2 283 37.8
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 9.3e-37 158.3 312 32.4
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 9.3e-37 158.3 312 32.4
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 3.5e-36 156.4 294 34.7
Glyma.04G082300 Glycine max HOM05D005302 ORTHO05D006422 1.8e-35 154.1 119 60.5
SEGI_07805 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 1.5e-34 151.0 116 57.8
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 2.8e-33 146.7 311 31.8
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 1.2e-31 141.4 251 30.3
Lj7A704G80 Lonicera japonica HOM05D005302 ORTHO05D006422 2.0e-31 140.6 148 46.6
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 2.6e-31 140.2 148 45.9
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 3.4e-31 139.8 148 46.6
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 7.6e-31 138.7 148 44.6
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 6.3e-25 119.0 399 25.6
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 1.9e-21 107.5 65 72.3
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 2.9e-14 83.6 261 26.4
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 2.5e-13 80.5 53 66.0
Hma1.2p1_1884F.1_g306480 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 7.9e-12 75.5 116 35.3
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 2.6e-10 70.5 32 75.0
arahy.Tifrunner.gnm1.ann1.B6YE6K Arachis hypogaea HOM05D005302 ORTHO05D006422 3.7e-09 66.6 165 29.1
CDE02G1858 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 7.0e-08 62.4 125 35.2
Potri.006G240100 Populus trichocarpa HOM05D005302 ORTHO05D006422 2.6e-07 60.5 79 39.2


User provided reference genes

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