Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G2012 Ceratophyllum demersum HOM05D005397 ORTHO05D006493 2.2e-51 205.3 100 100.0
CDE05G0602 Ceratophyllum demersum HOM05D005397 ORTHO05D006493 2.3e-45 185.3 97 91.8
Aqoxy6G02360 Aquilegia oxysepala HOM05D005397 ORTHO05D006493 2.0e-36 155.6 95 75.8
MSTRG.1224 Avicennia marina HOM05D005397 ORTHO05D006493 2.6e-36 155.2 95 75.8
Sopen04g034690 Solanum pennellii HOM05D005397 ORTHO05D006493 5.8e-36 154.1 95 72.6
PGSC0003DMG400003765 Solanum tuberosum HOM05D005397 ORTHO05D006493 7.6e-36 153.7 95 72.6
TAR145G0001 Trochodendron aralioides HOM05D005397 ORTHO05D006493 1.7e-35 152.5 95 72.6
PSO541G6090 Papaver somniferum HOM05D005397 ORTHO05D006493 2.2e-35 152.1 95 72.6
Nn5g29235 Nelumbo nucifera HOM05D005397 ORTHO05D006493 2.9e-35 151.8 95 70.5
Nitab4.5_0011205g0010 Nicotiana tabacum HOM05D005397 ORTHO05D006493 2.9e-35 151.8 95 71.6
Peaxi162Scf00287g01315 Petunia axillaris HOM05D005397 ORTHO05D006493 2.9e-35 151.8 96 70.8
Solyc04g081070.3 Solanum lycopersicum HOM05D005397 ORTHO05D006493 2.9e-35 151.8 95 71.6
CAN.G851.6 Capsicum annuum HOM05D005397 ORTHO05D006493 4.9e-35 151.0 95 71.6
ECA247G2991 Erigeron canadensis HOM05D005397 ORTHO05D006493 6.4e-35 150.6 95 70.5
SalBow7G0110 Salvia bowleyana HOM05D005397 ORTHO05D006493 6.4e-35 150.6 95 72.6
PSO675G6273 Papaver somniferum HOM05D005397 ORTHO05D006493 1.4e-34 149.4 95 70.5
Lj4A791T84 Lonicera japonica HOM05D005397 ORTHO05D006493 3.2e-34 148.3 95 70.5
TAR625G0278 Trochodendron aralioides HOM05D005397 ORTHO05D006493 3.2e-34 148.3 95 70.5
Actinidia37980 Actinidia chinensis HOM05D005397 ORTHO05D006493 5.4e-34 147.5 95 72.6
DCAR_013850 Daucus carota HOM05D005397 ORTHO05D006493 5.4e-34 147.5 95 72.6
GSVIVG01022614001 Vitis vinifera HOM05D005397 ORTHO05D006493 9.2e-34 146.7 94 69.1
Migut.C00793 Erythranthe guttata HOM05D005397 ORTHO05D006493 1.2e-33 146.4 95 70.5
Dinv31812 Davidia involucrata HOM05D005397 ORTHO05D006493 2.1e-33 145.6 95 69.5
Oeu046246.1 Olea europaea HOM05D005397 ORTHO05D006493 2.7e-33 145.2 98 67.3
CSS0019191 Camellia sinensis var. sinensis HOM05D005397 ORTHO05D006493 6.0e-33 144.1 95 69.5
SGA_v2.0_scaffold11G05874 Striga asiatica HOM05D005397 ORTHO05D006493 7.8e-33 143.7 95 67.4
vmacro04326 Vaccinium macrocarpon HOM05D005397 ORTHO05D006493 1.7e-32 142.5 95 69.5
Actinidia29797 Actinidia chinensis HOM05D005397 ORTHO05D006493 3.0e-32 141.7 95 69.5
ATR0149G027 Amborella trichopoda HOM05D005397 ORTHO05D006493 3.0e-32 141.7 95 70.5
Rhsim07G0244600 Rhododendron simsii HOM05D005397 ORTHO05D006493 3.0e-32 141.7 95 68.4
AUR62034574 Chenopodium quinoa HOM05D005397 ORTHO05D006493 3.3e-31 138.3 95 65.3
EL10Ac1g00550 Beta vulgaris HOM05D005397 ORTHO05D006493 5.6e-31 137.5 95 64.2
Cc10_g02070 Coffea canephora HOM05D005397 ORTHO05D006493 5.6e-31 137.5 95 63.2
PGR083G1852 Punica granatum HOM05D005397 ORTHO05D006493 7.3e-31 137.1 94 66.0
Sc02g0005180 Simmondsia chinensis HOM05D005397 ORTHO05D006493 7.3e-31 137.1 95 65.3
AUR62014423 Chenopodium quinoa HOM05D005397 ORTHO05D006493 1.3e-30 136.3 95 64.2
HanXRQChr04g0106461 Helianthus annuus HOM05D005397 ORTHO05D006493 1.6e-30 136.0 95 64.2
HanXRQChr02g0041801 Helianthus annuus HOM05D005397 ORTHO05D006493 2.8e-30 135.2 95 62.1
Hund17223 Selenicereus undatus HOM05D005397 ORTHO05D006493 4.8e-30 134.4 95 62.1
Os02g0122400 Oryza sativa ssp. japonica HOM05D005397 ORTHO05D006493 8.1e-30 133.7 96 62.5
Eucgr.F01622 Eucalyptus grandis HOM05D005397 ORTHO05D006493 1.1e-29 133.3 95 63.2
Oeu046244.1 Olea europaea HOM05D005397 ORTHO05D006493 3.1e-29 131.7 89 66.3
CANSAT78G0864 Cannabis sativa HOM05D005397 ORTHO05D006493 6.9e-29 130.6 95 62.1
SEGI_32422 Sequoiadendron giganteum HOM05D005397 ORTHO05D006493 9.0e-29 130.2 95 60.0
Lsat_1_v5_gn_1_16260 Lactuca sativa HOM05D005397 ORTHO05D006493 1.3e-27 126.3 92 62.0
Prupe.1G370400 Prunus persica HOM05D005397 ORTHO05D006493 1.7e-27 125.9 95 62.1
RcHm_v2.0_Chr6g0302171 Rosa chinensis HOM05D005397 ORTHO05D006493 1.7e-27 125.9 95 62.1
FAN20G2387 Fragaria x ananassa HOM05D005397 ORTHO05D006493 4.9e-27 124.4 95 61.1
HPP92_022425 Vanilla planifolia HOM05D005397 ORTHO05D006493 4.9e-27 124.4 95 56.8
FvH4_2g39070 Fragaria vesca HOM05D005397 ORTHO05D006493 6.4e-27 124.0 95 61.1
FAN27G0831 Fragaria x ananassa HOM05D005397 ORTHO05D006493 8.4e-27 123.6 95 61.1
Sed0023445 Sechium edule HOM05D005397 ORTHO05D006493 8.4e-27 123.6 95 60.0
Thecc.08G038000 Theobroma cacao HOM05D005397 ORTHO05D006493 8.4e-27 123.6 95 62.1
SMO116G0264 Selaginella moellendorffii HOM05D005397 ORTHO05D006493 1.1e-26 123.2 95 55.8
Duzib093G1874 Durio zibethinus HOM05D005397 ORTHO05D006493 1.4e-26 122.9 95 62.1
Gohir.D05G191300 Gossypium hirsutum HOM05D005397 ORTHO05D006493 1.9e-26 122.5 95 61.1
QL02p010766 Quercus lobata HOM05D005397 ORTHO05D006493 1.9e-26 122.5 95 62.1
ClCG08G014500 Citrullus lanatus HOM05D005397 ORTHO05D006493 2.4e-26 122.1 95 57.9
Zm00001eb208440 Zea mays HOM05D005397 ORTHO05D006493 2.4e-26 122.1 96 55.2
CsaV3_2G029290 Cucumis sativus L. HOM05D005397 ORTHO05D006493 4.2e-26 121.3 95 57.9
MELO3C010989.2 Cucumis melo HOM05D005397 ORTHO05D006493 9.3e-26 120.2 95 56.8
FAN15G0228 Fragaria x ananassa HOM05D005397 ORTHO05D006493 9.3e-26 120.2 95 60.0
Gohir.A05G188200 Gossypium hirsutum HOM05D005397 ORTHO05D006493 9.3e-26 120.2 95 60.0
Gorai.009G196600 Gossypium raimondii HOM05D005397 ORTHO05D006493 1.6e-25 119.4 95 60.0
CiPaw.07G153900 Carya illinoinensis HOM05D005397 ORTHO05D006493 4.6e-25 117.9 95 58.9
Haze_22588 Corylus avellana HOM05D005397 ORTHO05D006493 7.8e-25 117.1 94 59.6
SEGI_36408 Sequoiadendron giganteum HOM05D005397 ORTHO05D006493 7.8e-25 117.1 87 59.8
Mapoly0064s0104 Marchantia polymorpha HOM05D005397 ORTHO05D006493 1.7e-24 115.9 95 53.7
Carub.0008s0657 Capsella rubella HOM05D005397 ORTHO05D006493 3.0e-24 115.2 95 57.9
Pp3c21_1260 Physcomitrium patens HOM05D005397 ORTHO05D006493 3.0e-24 115.2 95 51.6
AL8G18860 Arabidopsis lyrata HOM05D005397 ORTHO05D006493 3.9e-24 114.8 95 57.9
AT5G42480 Arabidopsis thaliana HOM05D005397 ORTHO05D006493 3.9e-24 114.8 95 57.9
AagrBONN_evm.TU.Sc2ySwM_228.2424 Anthoceros agrestis HOM05D005397 ORTHO05D006493 5.1e-24 114.4 95 52.6
Cfa013909 Carpinus fangiana HOM05D005397 ORTHO05D006493 5.1e-24 114.4 94 58.5
Manes.18G017200 Manihot esculenta HOM05D005397 ORTHO05D006493 6.6e-24 114.0 93 57.0
Aa31LG9G12600 Aethionema arabicum HOM05D005397 ORTHO05D006493 8.7e-24 113.6 95 56.8
Atru.chr13.353 Acer truncatum HOM05D005397 ORTHO05D006493 1.1e-23 113.2 91 58.2
COL.COLO4_26194 Corchorus olitorius HOM05D005397 ORTHO05D006493 1.5e-23 112.8 90 57.8
Thhalv10003151m.g Eutrema salsugineum HOM05D005397 ORTHO05D006493 1.5e-23 112.8 95 56.8
Potri.005G235000 Populus trichocarpa HOM05D005397 ORTHO05D006493 1.5e-23 112.8 93 55.9
Lj5g0007176 Lotus japonicus HOM05D005397 ORTHO05D006493 1.9e-23 112.5 95 55.8
Ciclev10000372m.g Citrus clementina HOM05D005397 ORTHO05D006493 3.3e-23 111.7 91 53.8
Sp2g06890 Schrenkiella parvula HOM05D005397 ORTHO05D006493 3.3e-23 111.7 95 57.9
SpUn0014_0040 Schrenkiella parvula HOM05D005397 ORTHO05D006493 3.3e-23 111.7 95 57.9
SpUn0090_0020 Schrenkiella parvula HOM05D005397 ORTHO05D006493 3.3e-23 111.7 95 57.9
Cpa.g.sc140.23 Carica papaya HOM05D005397 ORTHO05D006493 4.3e-23 111.3 95 58.9
Sabra05G0181200 Salix brachista HOM05D005397 ORTHO05D006493 4.3e-23 111.3 93 54.8
Lalb_Chr24g0398791 Lupinus albus HOM05D005397 ORTHO05D006493 7.3e-23 110.5 95 54.7
THA.LOC104810654 Tarenaya hassleriana HOM05D005397 ORTHO05D006493 7.3e-23 110.5 93 55.9
CARHR181880 Cardamine hirsuta HOM05D005397 ORTHO05D006493 9.6e-23 110.2 95 53.7
CAN.G1213.4 Capsicum annuum HOM05D005397 ORTHO05D006493 1.3e-22 109.8 72 69.4
Medtr1g023310 Medicago truncatula HOM05D005397 ORTHO05D006493 1.6e-22 109.4 95 53.7
TPR.G40295 Trifolium pratense HOM05D005397 ORTHO05D006493 2.8e-22 108.6 95 53.7
Psat6g005320 Pisum sativum HOM05D005397 ORTHO05D006493 4.8e-22 107.8 95 53.7
BcaC02g10766 Brassica carinata HOM05D005397 ORTHO05D006493 8.1e-22 107.1 96 56.2
BcaC06g31756 Brassica carinata HOM05D005397 ORTHO05D006493 8.1e-22 107.1 96 56.2
A06p48310 Brassica napus HOM05D005397 ORTHO05D006493 8.1e-22 107.1 96 56.2
C04p25360 Brassica napus HOM05D005397 ORTHO05D006493 8.1e-22 107.1 96 56.2
BolC4t24042H Brassica oleracea HOM05D005397 ORTHO05D006493 8.1e-22 107.1 96 56.2
BraA06t27701Z Brassica rapa HOM05D005397 ORTHO05D006493 8.1e-22 107.1 96 56.2
arahy.Tifrunner.gnm1.ann1.FP07R2 Arachis hypogaea HOM05D005397 ORTHO05D006493 1.8e-21 105.9 95 52.6
arahy.Tifrunner.gnm1.ann1.WNU9KC Arachis hypogaea HOM05D005397 ORTHO05D006493 1.8e-21 105.9 95 52.6
Ca_13392_v3 Cicer arietinum L. HOM05D005397 ORTHO05D006493 1.8e-21 105.9 95 52.6
Glyma.17G255300 Glycine max HOM05D005397 ORTHO05D006493 2.4e-21 105.5 95 51.6
Glyma.14G216700 Glycine max HOM05D005397 ORTHO05D006493 6.9e-21 104.0 95 50.5
TWI12G0995 Tripterygium wilfordii HOM05D005397 ORTHO05D006493 1.2e-20 103.2 95 52.6
Phvul.001G009500 Phaseolus vulgaris HOM05D005397 ORTHO05D006493 1.5e-20 102.8 95 49.5
VMungo0647G1731 Vigna mungo HOM05D005397 ORTHO05D006493 1.5e-20 102.8 95 49.5
CBR_g40437 Chara braunii HOM05D005397 ORTHO05D006493 9.9e-20 100.1 94 50.0
DCAR_017505 Daucus carota HOM05D005397 ORTHO05D006493 1.3e-19 99.8 75 60.0
CBR_g40449 Chara braunii HOM05D005397 ORTHO05D006493 3.8e-19 98.2 94 50.0
Lalb_Chr14g0369691 Lupinus albus HOM05D005397 ORTHO05D006493 3.8e-19 98.2 95 49.5
PRCOL_00000058 Prasinoderma coloniale HOM05D005397 ORTHO05D006493 6.2e-14 80.9 96 41.7
MCO06G167 Micromonas commoda HOM05D005397 ORTHO05D006493 3.1e-13 78.6 98 41.8
AUR62019159 Chenopodium quinoa HOM05D005397 ORTHO05D006493 1.2e-12 76.6 63 60.3
DCAR_023244 Daucus carota HOM05D001982 ORTHO05D008035 5.7e-07 57.8 96 35.4
Zm00001eb066330 Zea mays HOM05D001982 ORTHO05D008035 5.7e-07 57.8 97 38.1
Lsat_1_v5_gn_0_10501 Lactuca sativa HOM05D001982 ORTHO05D008035 4.8e-06 54.7 96 38.5
PGSC0003DMG400037196 Solanum tuberosum HOM05D008291 ORTHO05D012653 8.2e-06 53.9 42 57.1


User provided reference genes

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