Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1990 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 1.3e-99 366.3 178 100.0
CDE05G0725 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 2.0e-63 246.1 201 67.2
CDE11G0634 Ceratophyllum demersum HOM05D005143 ORTHO05D006404 2.5e-58 229.2 214 59.8
Nn3g21616 Nelumbo nucifera HOM05D005143 ORTHO05D006404 9.7e-18 94.4 207 32.4
Ca_01881_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 2.2e-17 93.2 186 31.7
Ca_01895_v3 Cicer arietinum L. HOM05D005143 ORTHO05D006404 2.2e-17 93.2 186 31.7
Medtr2g034880 Medicago truncatula HOM05D005143 ORTHO05D006404 2.2e-17 93.2 186 32.3
TAR362G0369 Trochodendron aralioides HOM05D005143 ORTHO05D006404 3.7e-17 92.4 177 35.6
Lalb_Chr20g0121021 Lupinus albus HOM05D005143 ORTHO05D006404 8.2e-17 91.3 186 32.3
TPR.G27702 Trifolium pratense HOM05D005143 ORTHO05D006404 8.2e-17 91.3 170 35.3
TPR.G27704 Trifolium pratense HOM05D005143 ORTHO05D006404 1.4e-16 90.5 186 31.7
VMungo1309G2864 Vigna mungo HOM05D005143 ORTHO05D006404 1.4e-16 90.5 186 32.8
Glyma.09G039500 Glycine max HOM05D005143 ORTHO05D006404 1.8e-16 90.1 186 31.7
PSO761G0512 Papaver somniferum HOM05D005143 ORTHO05D006404 4.1e-16 89.0 188 34.6
Psat1g158200 Pisum sativum HOM05D005143 ORTHO05D006404 4.1e-16 89.0 186 31.7
Ciclev10007083m.g Citrus clementina HOM05D005143 ORTHO05D006404 5.3e-16 88.6 185 32.4
PSO210G3751 Papaver somniferum HOM05D005143 ORTHO05D006404 5.3e-16 88.6 188 34.6
Actinidia15583 Actinidia chinensis HOM05D005143 ORTHO05D006404 9.1e-16 87.8 186 32.3
RcHm_v2.0_Chr4g0424271 Rosa chinensis HOM05D005143 ORTHO05D006404 2.0e-15 86.7 193 31.6
Lalb_Chr18g0058921 Lupinus albus HOM05D005143 ORTHO05D006404 2.6e-15 86.3 186 32.8
Hma1.2p1_0013F.1_g008930 Hydrangea macrophylla HOM05D005143 ORTHO05D006404 3.4e-15 85.9 184 33.2
Aqoxy2G02819 Aquilegia oxysepala HOM05D005143 ORTHO05D006404 5.9e-15 85.1 192 33.3
Duzib052G1152 Durio zibethinus HOM05D005143 ORTHO05D006404 7.7e-15 84.7 187 32.1
FAN12G3988 Fragaria x ananassa HOM05D005143 ORTHO05D006404 7.7e-15 84.7 194 32.0
Glyma.15G144700 Glycine max HOM05D005143 ORTHO05D006404 7.7e-15 84.7 186 31.7
DCAR_030483 Daucus carota HOM05D005143 ORTHO05D006404 1.0e-14 84.3 184 31.0
Lj6g0005650 Lotus japonicus HOM05D005143 ORTHO05D006404 1.0e-14 84.3 186 31.2
QL06p011304 Quercus lobata HOM05D005143 ORTHO05D006404 1.0e-14 84.3 186 31.7
Prupe.1G125800 Prunus persica HOM05D005143 ORTHO05D006404 1.3e-14 84.0 192 29.7
CiPaw.01G142400 Carya illinoinensis HOM05D005143 ORTHO05D006404 1.7e-14 83.6 176 32.4
FvH4_4g19280 Fragaria vesca HOM05D005143 ORTHO05D006404 1.7e-14 83.6 194 32.0
DCAR_002501 Daucus carota HOM05D005143 ORTHO05D006404 2.2e-14 83.2 161 34.2
arahy.Tifrunner.gnm1.ann1.UTG064 Arachis hypogaea HOM05D005143 ORTHO05D006404 3.8e-14 82.4 187 31.0
Eucgr.A00195 Eucalyptus grandis HOM05D005143 ORTHO05D006404 5.0e-14 82.0 207 31.9
Glyma.17G031200 Glycine max HOM05D005143 ORTHO05D006404 6.5e-14 81.6 177 32.8
Lj6A685T16 Lonicera japonica HOM05D005143 ORTHO05D006404 6.5e-14 81.6 165 33.3
EL10Ac3g04926 Beta vulgaris HOM05D005143 ORTHO05D006404 8.5e-14 81.3 211 28.9
Dinv02072 Davidia involucrata HOM05D005143 ORTHO05D006404 8.5e-14 81.3 186 31.2
FAN12G2949 Fragaria x ananassa HOM05D005143 ORTHO05D006404 8.5e-14 81.3 179 33.0
Phvul.009G253600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 1.1e-13 80.9 186 30.6
Cc03_g01170 Coffea canephora HOM05D005143 ORTHO05D006404 1.4e-13 80.5 161 34.2
Medtr2g034890 Medicago truncatula HOM05D005143 ORTHO05D006404 1.4e-13 80.5 167 32.9
Actinidia40351 Actinidia chinensis HOM05D005143 ORTHO05D006404 1.9e-13 80.1 188 32.4
Sabra10G0108500 Salix brachista HOM05D005143 ORTHO05D006404 1.9e-13 80.1 188 31.9
Ah.04g154920 Amaranthus hybridus HOM05D005143 ORTHO05D006404 3.2e-13 79.3 179 31.3
CANSAT78G1129 Cannabis sativa HOM05D005143 ORTHO05D006404 4.2e-13 79.0 186 30.1
PGR031G1222 Punica granatum HOM05D005143 ORTHO05D006404 4.2e-13 79.0 189 28.6
vmacro08077 Vaccinium macrocarpon HOM05D005143 ORTHO05D006404 4.2e-13 79.0 177 32.8
GSVIVG01035046001 Vitis vinifera HOM05D005143 ORTHO05D006404 5.5e-13 78.6 186 31.7
Lsat_1_v5_gn_6_115260 Lactuca sativa HOM05D005143 ORTHO05D006404 7.2e-13 78.2 168 32.1
Cfa015478 Carpinus fangiana HOM05D005143 ORTHO05D006404 9.4e-13 77.8 186 30.6
Manes.15G007000 Manihot esculenta HOM05D005143 ORTHO05D006404 9.4e-13 77.8 186 29.6
TWI09G1317 Tripterygium wilfordii HOM05D005143 ORTHO05D006404 9.4e-13 77.8 166 32.5
Potri.010G140400 Populus trichocarpa HOM05D005143 ORTHO05D006404 1.6e-12 77.0 183 31.1
MSTRG.21781 Avicennia marina HOM05D005143 ORTHO05D006404 2.1e-12 76.6 178 30.3
Potri.008G108900 Populus trichocarpa HOM05D005143 ORTHO05D006404 2.1e-12 76.6 187 30.5
Potri.T170901 Populus trichocarpa HOM05D005143 ORTHO05D006404 2.1e-12 76.6 187 30.5
MD13G1158800 Malus domestica HOM05D005143 ORTHO05D006404 2.7e-12 76.3 187 29.9
Atru.chr4.2951 Acer truncatum HOM05D005143 ORTHO05D006404 3.6e-12 75.9 187 29.9
Rhsim04G0232200 Rhododendron simsii HOM05D005143 ORTHO05D006404 3.6e-12 75.9 180 32.2
arahy.Tifrunner.gnm1.ann1.PXPP98 Arachis hypogaea HOM05D005143 ORTHO05D006404 4.7e-12 75.5 173 30.1
AUR62035066 Chenopodium quinoa HOM05D005143 ORTHO05D006404 4.7e-12 75.5 185 29.2
TAR633G2465 Trochodendron aralioides HOM05D005143 ORTHO05D006404 4.7e-12 75.5 115 38.3
Dinv44320 Davidia involucrata HOM05D005143 ORTHO05D006404 6.1e-12 75.1 186 28.5
COL.COLO4_34676 Corchorus olitorius HOM05D005143 ORTHO05D006404 1.4e-11 73.9 186 30.1
Duzib151G0017 Durio zibethinus HOM05D005143 ORTHO05D006404 1.4e-11 73.9 181 30.9
VMungo1215G3234 Vigna mungo HOM05D005143 ORTHO05D006404 1.4e-11 73.9 161 32.3
FAN07G0192 Fragaria x ananassa HOM05D005143 ORTHO05D006404 1.8e-11 73.6 167 34.7
Gorai.011G195900 Gossypium raimondii HOM05D005143 ORTHO05D006404 1.8e-11 73.6 189 31.7
Phvul.003G110600 Phaseolus vulgaris HOM05D005143 ORTHO05D006404 1.8e-11 73.6 182 30.8
Haze_01089 Corylus avellana HOM05D005143 ORTHO05D006404 3.0e-11 72.8 167 31.1
ECA246G2788 Erigeron canadensis HOM05D005143 ORTHO05D006404 3.0e-11 72.8 165 30.9
Oeu016479.2 Olea europaea HOM05D005143 ORTHO05D006404 3.0e-11 72.8 164 31.1
Sc25g0003440 Simmondsia chinensis HOM05D005143 ORTHO05D006404 3.0e-11 72.8 180 30.6
CiPaw.02G077100 Carya illinoinensis HOM05D005143 ORTHO05D006404 3.9e-11 72.4 187 29.4
Gohir.A10G168900 Gossypium hirsutum HOM05D005143 ORTHO05D006404 3.9e-11 72.4 189 31.7
Gohir.D10G175100 Gossypium hirsutum HOM05D005143 ORTHO05D006404 3.9e-11 72.4 189 31.7
Sabra08G0082500 Salix brachista HOM05D005143 ORTHO05D006404 5.2e-11 72.0 186 28.5
Peaxi162Scf00065g00033 Petunia axillaris HOM05D005143 ORTHO05D006404 6.7e-11 71.6 175 30.3
Hund02954 Selenicereus undatus HOM05D005143 ORTHO05D006404 6.7e-11 71.6 179 30.2
Cpa.g.sc9.99 Carica papaya HOM05D005143 ORTHO05D006404 8.8e-11 71.2 191 28.3
CSS0004405 Camellia sinensis var. sinensis HOM05D005143 ORTHO05D006404 1.1e-10 70.9 182 30.8
MBI19_g29991_MAGBIO Magnolia biondii HOM05D005143 ORTHO05D006404 1.5e-10 70.5 121 33.9
SGA_v2.0_scaffold119G32680 Striga asiatica HOM05D005143 ORTHO05D006404 1.5e-10 70.5 171 29.2
MD16G1159000 Malus domestica HOM05D005143 ORTHO05D006404 2.0e-10 70.1 187 28.9
Zm00001eb127640 Zea mays HOM05D005143 ORTHO05D006404 2.6e-10 69.7 154 32.5
HanXRQChr03g0093441 Helianthus annuus HOM05D005143 ORTHO05D006404 3.3e-10 69.3 136 36.8
Os01g0253400 Oryza sativa ssp. japonica HOM05D005143 ORTHO05D006404 5.7e-10 68.6 152 30.3
Sed0010751 Sechium edule HOM05D005143 ORTHO05D006404 7.4e-10 68.2 175 26.9
HPP92_001064 Vanilla planifolia HOM05D005143 ORTHO05D006404 9.7e-10 67.8 183 30.1
MELO3C006698.2 Cucumis melo HOM05D005143 ORTHO05D006404 1.3e-09 67.4 198 27.8
Sopen01g026590 Solanum pennellii HOM05D005143 ORTHO05D006404 1.3e-09 67.4 164 30.5
CAN.G1016.6 Capsicum annuum HOM05D005143 ORTHO05D006404 2.2e-09 66.6 163 30.7
Sabra08G0082600 Salix brachista HOM05D005143 ORTHO05D006404 2.2e-09 66.6 142 33.1
PGSC0003DMG400014988 Solanum tuberosum HOM05D005143 ORTHO05D006404 2.8e-09 66.2 164 30.5
arahy.Tifrunner.gnm1.ann1.W9GTE1 Arachis hypogaea HOM05D005143 ORTHO05D006404 3.7e-09 65.9 182 29.1
Nitab4.5_0000169g0050 Nicotiana tabacum HOM05D005143 ORTHO05D006404 4.8e-09 65.5 181 29.3
SalBow5G4838 Salvia bowleyana HOM05D005143 ORTHO05D006404 6.3e-09 65.1 180 27.2
CsaV3_3G015020 Cucumis sativus L. HOM05D005143 ORTHO05D006404 8.2e-09 64.7 166 28.9
THA.LOC104818896 Tarenaya hassleriana HOM05D005143 ORTHO05D006404 8.2e-09 64.7 182 25.8
arahy.Tifrunner.gnm1.ann1.RF9CFS Arachis hypogaea HOM05D005143 ORTHO05D006404 1.4e-08 63.9 152 30.9
CARHR182240 Cardamine hirsuta HOM05D005143 ORTHO05D006404 1.4e-08 63.9 160 29.4
Migut.N00060 Erythranthe guttata HOM05D005143 ORTHO05D006404 1.4e-08 63.9 167 29.9
Thhalv10005363m.g Eutrema salsugineum HOM05D005143 ORTHO05D006404 1.4e-08 63.9 91 39.6
Thecc.04G294800 Theobroma cacao HOM05D005143 ORTHO05D006404 1.4e-08 63.9 91 39.6
Nitab4.5_0001695g0020 Nicotiana tabacum HOM05D005143 ORTHO05D006404 1.8e-08 63.5 181 28.2
SEGI_03781 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 2.4e-08 63.2 179 26.3
SEGI_27691 Sequoiadendron giganteum HOM05D005143 ORTHO05D006404 2.4e-08 63.2 179 26.3
Solyc01g060450.3 Solanum lycopersicum HOM05D005143 ORTHO05D006404 2.4e-08 63.2 164 29.9
Carub.0008s0919 Capsella rubella HOM05D005143 ORTHO05D006404 3.1e-08 62.8 160 30.0
Sp2g19670 Schrenkiella parvula HOM05D005143 ORTHO05D006404 5.3e-08 62.0 91 37.4
BcaB07g34148 Brassica carinata HOM05D005143 ORTHO05D006404 9.1e-08 61.2 160 28.8
ClCG05G006400 Citrullus lanatus HOM05D005143 ORTHO05D006404 9.1e-08 61.2 87 37.9
BolC7t44512H Brassica oleracea HOM05D005143 ORTHO05D006404 1.2e-07 60.8 159 28.9
Lalb_Chr12g0200981 Lupinus albus HOM05D005143 ORTHO05D006404 1.2e-07 60.8 152 30.9
Aa31LG11G7840 Aethionema arabicum HOM05D005143 ORTHO05D006404 1.6e-07 60.5 172 26.2
BcaC03g17714 Brassica carinata HOM05D005143 ORTHO05D006404 1.6e-07 60.5 160 28.8
C02p57210 Brassica napus HOM05D005143 ORTHO05D006404 1.6e-07 60.5 160 28.8
BolC2t11792H Brassica oleracea HOM05D005143 ORTHO05D006404 1.6e-07 60.5 160 28.8
SGA_v2.0_scaffold91G28048 Striga asiatica HOM05D005143 ORTHO05D006404 1.6e-07 60.5 165 30.3
BcaNung02596 Brassica carinata HOM05D005143 ORTHO05D006404 2.0e-07 60.1 159 28.9
A02p38010 Brassica napus HOM05D005143 ORTHO05D006404 2.0e-07 60.1 160 28.8
C07p39840 Brassica napus HOM05D005143 ORTHO05D006404 2.0e-07 60.1 159 28.9
BraA02t08785Z Brassica rapa HOM05D005143 ORTHO05D006404 2.0e-07 60.1 160 28.8
AT5G49320 Arabidopsis thaliana HOM05D005143 ORTHO05D006404 2.6e-07 59.7 91 36.3
ATR0706G251 Amborella trichopoda HOM05D005143 ORTHO05D006404 4.5e-07 58.9 123 33.3
AL8G22960 Arabidopsis lyrata HOM05D005143 ORTHO05D006404 4.5e-07 58.9 91 35.2
Nitab4.5_0005463g0090 Nicotiana tabacum HOM05D005143 ORTHO05D006404 2.2e-06 56.6 94 39.4
AUR62043573 Chenopodium quinoa HOM05D005143 ORTHO05D006404 5.0e-06 55.5 118 30.5


User provided reference genes

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