Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 7.5e-250 866.7 426 100.0
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 1.7e-140 503.4 449 57.5
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 3.5e-138 495.7 400 59.2
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 8.0e-135 484.6 418 57.4
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 2.0e-133 479.9 412 57.8
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 9.7e-133 477.6 425 56.5
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 9.7e-133 477.6 411 57.2
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 4.8e-132 475.3 417 56.4
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 4.8e-132 475.3 448 54.0
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 7.0e-131 471.5 398 57.3
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 3.5e-130 469.2 420 55.7
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 5.0e-129 465.3 442 53.4
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 6.5e-129 464.9 422 54.5
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 8.5e-129 464.5 412 56.8
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 2.5e-128 463.0 406 56.4
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 3.2e-128 462.6 420 55.2
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 9.4e-128 461.1 460 52.4
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 1.2e-127 460.7 401 56.4
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 1.6e-127 460.3 407 57.5
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 5.2e-126 455.3 408 55.9
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 6.8e-126 454.9 422 55.7
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 8.8e-126 454.5 430 54.2
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 1.5e-125 453.8 413 54.2
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 1.5e-125 453.8 402 55.0
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 2.0e-125 453.4 395 57.0
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 3.4e-125 452.6 402 56.5
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 4.4e-125 452.2 413 54.2
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 4.4e-125 452.2 402 56.5
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 7.5e-125 451.4 430 53.5
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 7.5e-125 451.4 412 53.6
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 7.5e-125 451.4 401 54.9
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 1.7e-124 450.3 401 56.1
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 1.8e-123 446.8 428 52.1
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 3.1e-123 446.0 402 55.0
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 4.1e-123 445.7 405 56.0
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 4.1e-123 445.7 402 55.0
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 4.1e-123 445.7 403 56.8
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 5.4e-123 445.3 398 56.0
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 9.1e-123 444.5 403 54.1
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 1.6e-122 443.7 412 54.1
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 2.0e-122 443.4 405 55.1
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 2.0e-122 443.4 418 54.8
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 2.7e-122 443.0 445 51.9
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 3.5e-122 442.6 420 53.3
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 3.5e-122 442.6 438 52.1
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 5.9e-122 441.8 402 54.7
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 1.0e-121 441.0 414 53.9
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 2.9e-121 439.5 392 55.4
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 2.9e-121 439.5 405 55.6
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 5.0e-121 438.7 420 52.9
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 1.5e-120 437.2 444 50.9
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 1.5e-120 437.2 433 52.2
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 4.2e-120 435.6 413 53.8
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 4.2e-120 435.6 411 54.7
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 5.5e-120 435.3 401 54.4
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 5.5e-120 435.3 406 55.7
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 3.6e-119 432.6 426 53.1
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 3.6e-119 432.6 401 54.1
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 4.7e-119 432.2 402 55.2
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 3.0e-118 429.5 460 50.0
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 4.4e-117 425.6 399 52.6
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 4.9e-116 422.2 402 52.5
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 6.3e-116 421.8 411 51.3
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 1.6e-114 417.2 408 52.7
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 2.0e-114 416.8 390 52.3
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 2.7e-114 416.4 398 53.8
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 3.5e-114 416.0 441 49.0
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 4.5e-114 415.6 394 53.0
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 5.9e-114 415.2 411 53.0
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 7.8e-114 414.8 424 52.1
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 1.7e-113 413.7 411 51.6
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 1.7e-113 413.7 402 53.0
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 3.8e-113 412.5 399 51.4
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 5.0e-113 412.1 369 55.8
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.1e-112 411.0 401 50.9
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 1.9e-112 410.2 399 51.4
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 1.9e-112 410.2 399 51.4
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 5.6e-112 408.7 399 50.4
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 1.2e-111 407.5 391 52.7
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 2.3e-110 403.3 415 50.6
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 2.3e-110 403.3 432 48.1
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 1.5e-109 400.6 385 53.2
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 4.4e-109 399.1 435 46.4
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 6.4e-108 395.2 398 51.0
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 7.3e-104 381.7 398 49.5
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 9.5e-104 381.3 365 52.6
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 1.7e-100 370.5 412 46.8
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 3.0e-97 359.8 391 48.6
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 1.9e-96 357.1 360 51.7
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 3.1e-94 349.7 359 49.3
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 2.0e-93 347.1 267 59.6
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 2.7e-90 336.7 271 59.4
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 3.9e-89 332.8 431 41.1
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 3.9e-89 332.8 379 44.9
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 1.4e-86 324.3 269 56.5
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 1.2e-82 311.2 419 39.9
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 7.3e-80 302.0 280 55.4
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 4.2e-51 206.5 272 39.7
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 3.4e-45 186.8 268 40.3
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 6.5e-44 182.6 123 65.9
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 1.6e-42 177.9 395 34.9
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 5.5e-35 152.9 201 42.8
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 4.7e-34 149.8 510 25.5
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 3.8e-28 130.2 117 58.1
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 4.1e-22 110.2 496 24.2
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 7.0e-22 109.4 236 32.2
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 3.7e-15 87.0 100 48.0
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 4.8e-15 86.7 76 56.6
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 9.1e-14 82.4 63 58.7
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 4.4e-08 63.5 43 69.8


User provided reference genes

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