Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1960 Ceratophyllum demersum HOM05D006197 ORTHO05D007718 2.8e-61 238.4 122 100.0
Sopen05g026900 Solanum pennellii HOM05D006197 ORTHO05D007718 1.5e-09 66.6 67 53.7
Sopen08g025860 Solanum pennellii HOM05D006197 ORTHO05D007718 1.5e-09 66.6 67 53.7
PGSC0003DMG400024214 Solanum tuberosum HOM05D006197 ORTHO05D007718 1.5e-09 66.6 67 53.7
Nitab4.5_0006693g0020 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.5e-09 65.9 67 53.7
Solyc08g077280.1 Solanum lycopersicum HOM05D006197 ORTHO05D007718 2.5e-09 65.9 67 53.7
Nitab4.5_0002055g0120 Nicotiana tabacum HOM05D006197 ORTHO05D007718 2.1e-08 62.8 67 52.2
Lsat_1_v5_gn_6_66400 Lactuca sativa HOM05D006197 ORTHO05D007718 1.1e-07 60.5 75 52.0
Haze_08298 Corylus avellana HOM05D006197 ORTHO05D007718 1.4e-07 60.1 62 50.0
Hma1.2p1_0311F.1_g121310 Hydrangea macrophylla HOM05D006197 ORTHO05D007718 1.8e-07 59.7 65 47.7
MBI02_g29718_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009071 1.8e-07 59.7 67 52.2
Nn1g03717 Nelumbo nucifera HOM05D006197 ORTHO05D007718 1.8e-07 59.7 63 47.6
Aqoxy1G03814 Aquilegia oxysepala HOM05D006197 ORTHO05D007718 4.0e-07 58.5 64 53.1
CSS0031892 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 4.0e-07 58.5 71 49.3
CSS0033989 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 4.0e-07 58.5 71 49.3
CSS0037645 Camellia sinensis var. sinensis HOM05D006197 ORTHO05D007718 4.0e-07 58.5 71 49.3
MBI11_g07528_MAGBIO Magnolia biondii HOM05D006197 ORTHO05D007718 4.0e-07 58.5 65 50.8
THA.LOC104819961 Tarenaya hassleriana HOM05D006197 ORTHO05D007718 5.3e-07 58.2 64 51.6
CiPaw.11G087500 Carya illinoinensis HOM05D006197 ORTHO05D007718 6.9e-07 57.8 64 46.9
Cc08_g01810 Coffea canephora HOM05D006197 ORTHO05D007718 6.9e-07 57.8 67 49.3
Cc00_g23310 Coffea canephora HOM05D006197 ORTHO05D007718 9.0e-07 57.4 67 49.3
DCAR_008300 Daucus carota HOM05D006197 ORTHO05D007718 9.0e-07 57.4 66 50.0
Prupe.5G046200 Prunus persica HOM05D006197 ORTHO05D007718 9.0e-07 57.4 61 49.2
Cc00_g30230 Coffea canephora HOM05D006197 ORTHO05D007718 1.2e-06 57.0 67 49.3
A07p24860 Brassica napus HOM05D006197 ORTHO05D007718 1.5e-06 56.6 62 53.2
BraA07t30130Z Brassica rapa HOM05D006197 ORTHO05D007718 1.5e-06 56.6 62 53.2
Cfa012386 Carpinus fangiana HOM05D006197 ORTHO05D007718 1.5e-06 56.6 62 48.4
Cc00_g26570 Coffea canephora HOM05D006197 ORTHO05D007718 1.5e-06 56.6 67 47.8
TAR624G0346 Trochodendron aralioides HOM05D006197 ORTHO05D007718 1.5e-06 56.6 63 52.4
Duzib205G0278 Durio zibethinus HOM05D006197 ORTHO05D007718 2.0e-06 56.2 64 45.3
Sed0004723 Sechium edule HOM05D006197 ORTHO05D007718 2.0e-06 56.2 63 44.4
GSVIVG01013230001 Vitis vinifera HOM05D006197 ORTHO05D007718 3.4e-06 55.5 65 49.2
BcaC08g45013 Brassica carinata HOM05D006197 ORTHO05D007718 7.6e-06 54.3 62 53.2
BolC6t37808H Brassica oleracea HOM05D006197 ORTHO05D007718 7.6e-06 54.3 62 53.2
Dinv28915 Davidia involucrata HOM05D006197 ORTHO05D007718 7.6e-06 54.3 66 47.0
Sed0016057 Sechium edule HOM05D006197 ORTHO05D007718 7.6e-06 54.3 62 46.8
Aa31LG10G14080 Aethionema arabicum HOM05D006197 ORTHO05D007718 1.0e-05 53.9 65 52.3
Potri.001G146700 Populus trichocarpa HOM05D006197 ORTHO05D007718 1.0e-05 53.9 68 50.0


User provided reference genes

Program Settings