Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1903 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 1.2e-103 379.8 187 100.0
CDE05G2761 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 1.1e-83 313.5 166 94.6
Ciclev10007425m.g Citrus clementina HOM05D002952 ORTHO05D003361 9.1e-51 204.1 152 65.1
Dinv41190 Davidia involucrata HOM05D002952 ORTHO05D003361 7.7e-50 201.1 153 62.7
Nn8g40677 Nelumbo nucifera HOM05D002952 ORTHO05D003361 1.3e-49 200.3 163 60.1
CiPaw.07G198300 Carya illinoinensis HOM05D002952 ORTHO05D003361 2.9e-49 199.1 153 63.4
Atru.chr7.937 Acer truncatum HOM05D002952 ORTHO05D003361 6.5e-49 198.0 152 59.9
Peaxi162Scf00231g00918 Petunia axillaris HOM05D002952 ORTHO05D003361 1.1e-48 197.2 152 61.2
Cc06_g17430 Coffea canephora HOM05D002952 ORTHO05D003361 9.4e-48 194.1 154 62.3
Manes.06G018200 Manihot esculenta HOM05D002952 ORTHO05D003361 9.4e-48 194.1 153 62.7
GSVIVG01029303001 Vitis vinifera HOM05D002952 ORTHO05D003361 9.4e-48 194.1 153 60.8
Nitab4.5_0001245g0040 Nicotiana tabacum HOM05D002952 ORTHO05D003361 2.1e-47 193.0 152 60.5
PSO170G2574 Papaver somniferum HOM05D002952 ORTHO05D003361 4.7e-47 191.8 152 61.8
Eucgr.C00100 Eucalyptus grandis HOM05D002952 ORTHO05D003361 6.1e-47 191.4 152 61.2
Gohir.D13G212300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 8.0e-47 191.0 152 61.8
PSO063G0242 Papaver somniferum HOM05D002952 ORTHO05D003361 1.4e-46 190.3 152 61.2
Dinv25450 Davidia involucrata HOM05D002952 ORTHO05D003361 1.8e-46 189.9 154 60.4
COL.COLO4_23445 Corchorus olitorius HOM05D002952 ORTHO05D003361 2.3e-46 189.5 151 63.6
Duzib150G0495 Durio zibethinus HOM05D002952 ORTHO05D003361 2.3e-46 189.5 152 61.8
Oeu064560.1 Olea europaea HOM05D002952 ORTHO05D003361 2.3e-46 189.5 152 62.5
Gorai.013G242600 Gossypium raimondii HOM05D002952 ORTHO05D003361 3.0e-46 189.1 152 61.2
Thecc.09G188100 Theobroma cacao HOM05D002952 ORTHO05D003361 3.0e-46 189.1 152 61.8
Lju170C21T3 Lonicera japonica HOM05D002952 ORTHO05D003361 4.0e-46 188.7 154 61.0
Aqoxy7G02883 Aquilegia oxysepala HOM05D002952 ORTHO05D003361 6.8e-46 188.0 152 61.2
Gohir.A13G207800 Gossypium hirsutum HOM05D002952 ORTHO05D003361 6.8e-46 188.0 152 61.2
Potri.018G140800 Populus trichocarpa HOM05D002952 ORTHO05D003361 6.8e-46 188.0 153 60.8
CAN.G32.3 Capsicum annuum HOM05D002952 ORTHO05D003361 8.8e-46 187.6 152 59.2
Actinidia38497 Actinidia chinensis HOM05D002952 ORTHO05D003361 1.5e-45 186.8 152 57.2
MSTRG.5937 Avicennia marina HOM05D002952 ORTHO05D003361 2.0e-45 186.4 153 60.8
Solyc07g018090.4 Solanum lycopersicum HOM05D002952 ORTHO05D003361 2.0e-45 186.4 152 58.6
Nitab4.5_0006774g0010 Nicotiana tabacum HOM05D002952 ORTHO05D003361 3.4e-45 185.7 179 54.7
Sp3g32670 Schrenkiella parvula HOM05D002952 ORTHO05D003361 4.4e-45 185.3 152 61.2
Glyma.15G167100 Glycine max HOM05D002952 ORTHO05D003361 5.7e-45 184.9 153 58.8
CANSAT01G1287 Cannabis sativa HOM05D002952 ORTHO05D003361 7.5e-45 184.5 152 60.5
Lj6g0025977 Lotus japonicus HOM05D002952 ORTHO05D003361 9.8e-45 184.1 153 58.2
Sopen07g007020 Solanum pennellii HOM05D002952 ORTHO05D003361 9.8e-45 184.1 152 57.9
Prupe.1G073600 Prunus persica HOM05D002952 ORTHO05D003361 1.3e-44 183.7 153 59.5
Sabra18G0115000 Salix brachista HOM05D002952 ORTHO05D003361 1.7e-44 183.3 153 59.5
Aa31LG8G16340 Aethionema arabicum HOM05D002952 ORTHO05D003361 2.8e-44 182.6 154 61.7
Rhsim03G0267600 Rhododendron simsii HOM05D002952 ORTHO05D003361 3.7e-44 182.2 153 57.5
Glyma.09G060600 Glycine max HOM05D002952 ORTHO05D003361 4.9e-44 181.8 153 57.5
arahy.Tifrunner.gnm1.ann1.32QIWM Arachis hypogaea HOM05D002952 ORTHO05D003361 6.3e-44 181.4 153 58.2
arahy.Tifrunner.gnm1.ann1.MZE1GT Arachis hypogaea HOM05D002952 ORTHO05D003361 6.3e-44 181.4 153 58.2
CSS0013758 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 8.3e-44 181.0 151 57.0
RcHm_v2.0_Chr4g0399151 Rosa chinensis HOM05D002952 ORTHO05D003361 8.3e-44 181.0 152 57.9
ATR0580G026 Amborella trichopoda HOM05D002952 ORTHO05D003361 1.4e-43 180.3 153 60.1
Hma1.2p1_0235F.1_g098720 Hydrangea macrophylla HOM05D002952 ORTHO05D003361 1.4e-43 180.3 141 60.3
Cfa013462 Carpinus fangiana HOM05D002952 ORTHO05D003361 1.8e-43 179.9 153 58.2
Haze_22041 Corylus avellana HOM05D002952 ORTHO05D003361 1.8e-43 179.9 153 58.8
DCAR_014676 Daucus carota HOM05D002952 ORTHO05D003361 1.8e-43 179.9 152 60.5
FAN12G2043 Fragaria x ananassa HOM05D002952 ORTHO05D003361 1.8e-43 179.9 150 58.7
VMungo1309G2675 Vigna mungo HOM05D002952 ORTHO05D003361 1.8e-43 179.9 153 56.2
Thhalv10022546m.g Eutrema salsugineum HOM05D002952 ORTHO05D003361 2.4e-43 179.5 150 60.0
Actinidia25392 Actinidia chinensis HOM05D002952 ORTHO05D003361 3.1e-43 179.1 153 54.9
FvH4_4g07030 Fragaria vesca HOM05D002952 ORTHO05D003361 4.1e-43 178.7 150 58.0
PGR142G2741 Punica granatum HOM05D002952 ORTHO05D003361 4.1e-43 178.7 152 58.6
ECA240G1792 Erigeron canadensis HOM05D002952 ORTHO05D003361 5.4e-43 178.3 153 60.8
MD13G1240300 Malus domestica HOM05D002952 ORTHO05D003361 5.4e-43 178.3 153 56.9
Cpa.g.sc115.66 Carica papaya HOM05D002952 ORTHO05D003361 7.0e-43 177.9 152 55.9
Psat1g143480 Pisum sativum HOM05D002952 ORTHO05D003361 7.0e-43 177.9 153 58.8
Ca_02121_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 9.1e-43 177.6 153 58.8
Medtr2g038210 Medicago truncatula HOM05D002952 ORTHO05D003361 9.1e-43 177.6 153 58.2
Migut.J00788 Erythranthe guttata HOM05D002952 ORTHO05D003361 1.6e-42 176.8 153 58.2
vmacro05990 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 2.7e-42 176.0 174 50.6
Lsat_1_v5_gn_7_55800 Lactuca sativa HOM05D002952 ORTHO05D003361 4.5e-42 175.3 151 58.9
Sc14g0003040 Simmondsia chinensis HOM05D002952 ORTHO05D003361 5.9e-42 174.9 157 54.8
FAN22G0487 Fragaria x ananassa HOM05D002952 ORTHO05D003361 7.7e-42 174.5 150 58.0
unitig_26.g9160 Utricularia gibba HOM05D002952 ORTHO05D003361 1.0e-41 174.1 153 56.9
BcaB08g34852 Brassica carinata HOM05D002952 ORTHO05D003361 1.3e-41 173.7 150 56.7
BcaC06g36561 Brassica carinata HOM05D002952 ORTHO05D003361 1.3e-41 173.7 152 57.2
C07p02900 Brassica napus HOM05D002952 ORTHO05D003361 1.3e-41 173.7 152 57.2
BcaB03g14394 Brassica carinata HOM05D002952 ORTHO05D003361 1.7e-41 173.3 154 56.5
C07p24030 Brassica napus HOM05D002952 ORTHO05D003361 1.7e-41 173.3 154 56.5
BolC7t42928H Brassica oleracea HOM05D002952 ORTHO05D003361 1.7e-41 173.3 154 56.5
A07p01440 Brassica napus HOM05D002952 ORTHO05D003361 2.3e-41 172.9 152 56.6
A07p16350 Brassica napus HOM05D002952 ORTHO05D003361 2.3e-41 172.9 154 55.8
BraA07t29362Z Brassica rapa HOM05D002952 ORTHO05D003361 2.3e-41 172.9 154 55.8
THA.LOC104814647 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.3e-41 172.9 152 56.6
Lalb_Chr13g0299881 Lupinus albus HOM05D002952 ORTHO05D003361 3.8e-41 172.2 153 54.9
Potri.006G073600 Populus trichocarpa HOM05D002952 ORTHO05D003361 3.8e-41 172.2 153 56.2
AL5G18050 Arabidopsis lyrata HOM05D002952 ORTHO05D003361 5.0e-41 171.8 149 59.1
AT3G28430 Arabidopsis thaliana HOM05D002952 ORTHO05D003361 6.6e-41 171.4 150 60.0
FAN17G1204 Fragaria x ananassa HOM05D002952 ORTHO05D003361 6.6e-41 171.4 150 57.3
HanXRQChr03g0065441 Helianthus annuus HOM05D002952 ORTHO05D003361 6.6e-41 171.4 153 57.5
TPR.G31045 Trifolium pratense HOM05D002952 ORTHO05D003361 6.6e-41 171.4 153 57.5
FAN07G2391 Fragaria x ananassa HOM05D002952 ORTHO05D003361 8.6e-41 171.0 150 56.0
Sabra06G0054900 Salix brachista HOM05D002952 ORTHO05D003361 4.3e-40 168.7 153 56.2
HPP92_015379 Vanilla planifolia HOM05D002952 ORTHO05D003361 5.6e-40 168.3 152 56.6
THA.LOC104803958 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 9.5e-40 167.5 152 57.9
THA.LOC104804523 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 9.5e-40 167.5 152 57.9
THA.LOC104804524 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 9.5e-40 167.5 152 57.9
THA.LOC104804525 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 9.5e-40 167.5 152 57.9
ClCG11G011660 Citrullus lanatus HOM05D002952 ORTHO05D003361 2.8e-39 166.0 153 56.2
BraA07t27938Z Brassica rapa HOM05D002952 ORTHO05D003361 3.6e-39 165.6 152 55.9
Ca_21260_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 3.6e-39 165.6 155 52.3
Os04g0298600 Oryza sativa ssp. japonica HOM05D002952 ORTHO05D003361 3.6e-39 165.6 152 55.9
Sed0020294 Sechium edule HOM05D002952 ORTHO05D003361 3.6e-39 165.6 153 56.2
MELO3C003959.2 Cucumis melo HOM05D002952 ORTHO05D003361 1.8e-38 163.3 153 56.2
CsaV3_2G008810 Cucumis sativus L. HOM05D002952 ORTHO05D003361 1.8e-38 163.3 153 55.6
Lalb_Chr07g0180711 Lupinus albus HOM05D002952 ORTHO05D003361 1.8e-38 163.3 153 52.9
Psat4g013440 Pisum sativum HOM05D002952 ORTHO05D003361 1.8e-38 163.3 155 52.3
Zm00001eb420400 Zea mays HOM05D002952 ORTHO05D003361 1.8e-38 163.3 152 55.3
BcaB03g16719 Brassica carinata HOM05D002952 ORTHO05D003361 4.0e-38 162.2 152 54.6
HanXRQChr09g0245381 Helianthus annuus HOM05D002952 ORTHO05D003361 5.2e-38 161.8 153 55.6
MBI14_g10721_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 2.6e-37 159.5 152 52.6
AUR62027417 Chenopodium quinoa HOM05D002952 ORTHO05D003361 7.5e-37 157.9 150 50.7
Phvul.003G140400 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 1.7e-36 156.8 153 52.3
AUR62031276 Chenopodium quinoa HOM05D002952 ORTHO05D003361 2.9e-36 156.0 150 52.0
Lj4g0023754 Lotus japonicus HOM05D002952 ORTHO05D003361 3.7e-36 155.6 151 49.7
EL10Ac8g19298 Beta vulgaris HOM05D002952 ORTHO05D003361 6.4e-36 154.8 151 52.3
VMungo1215G0843 Vigna mungo HOM05D002952 ORTHO05D003361 8.3e-36 154.5 153 51.0
CARHR292530 Cardamine hirsuta HOM05D002952 ORTHO05D003361 1.4e-35 153.7 150 52.7
Medtr4g127210 Medicago truncatula HOM05D002952 ORTHO05D003361 1.8e-35 153.3 155 48.4
TPR.G5387 Trifolium pratense HOM05D002952 ORTHO05D003361 1.2e-34 150.6 154 49.4
Ah.09g229430 Amaranthus hybridus HOM05D002952 ORTHO05D003361 1.5e-32 143.7 151 50.3
SGA_v2.0_scaffold112G31613 Striga asiatica HOM05D002952 ORTHO05D003361 8.0e-31 137.9 115 55.7
Carub.0005s0694 Capsella rubella HOM05D002952 ORTHO05D003361 2.2e-28 129.8 113 58.4
SEGI_03548 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 2.2e-28 129.8 151 47.7
SEGI_10738 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 2.8e-23 112.8 151 42.4
Pp3c5_16960 Physcomitrium patens HOM05D002952 ORTHO05D003361 1.2e-21 107.5 161 37.9
AagrBONN_evm.TU.Sc2ySwM_362.2680 Anthoceros agrestis HOM05D002952 ORTHO05D003361 7.5e-21 104.8 155 35.5
Pp3c16_8730 Physcomitrium patens HOM05D002952 ORTHO05D003361 1.4e-19 100.5 155 39.4
Mapoly0006s0005 Marchantia polymorpha HOM05D002952 ORTHO05D003361 2.1e-18 96.7 159 39.6
QL02p047151 Quercus lobata HOM05D002952 ORTHO05D003361 3.0e-17 92.8 56 75.0
MBI16_g46830_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 3.9e-17 92.4 56 75.0
SMO356G0480 Selaginella moellendorffii HOM05D002952 ORTHO05D003361 5.6e-16 88.6 165 37.0
Hund12689 Selenicereus undatus HOM05D002952 ORTHO05D003361 1.1e-14 84.3 159 36.5
TAR633G2330 Trochodendron aralioides HOM05D002952 ORTHO05D003361 2.3e-14 83.2 152 34.2
CBR_g9125 Chara braunii HOM05D002952 ORTHO05D003361 3.1e-14 82.8 151 32.5
Sabra06G0157600 Salix brachista HOM05D002952 ORTHO05D003361 3.4e-13 79.3 163 31.3
COL.COLO4_29595 Corchorus olitorius HOM05D002952 ORTHO05D003361 4.4e-13 79.0 151 33.1
Duzib093G0565 Durio zibethinus HOM05D002952 ORTHO05D003361 5.8e-13 78.6 150 31.3
Sc02g0000570 Simmondsia chinensis HOM05D002952 ORTHO05D003361 5.8e-13 78.6 149 31.5
TPR.G31863 Trifolium pratense HOM05D002952 ORTHO05D003361 5.8e-13 78.6 151 32.5
RcHm_v2.0_Chr3g0475531 Rosa chinensis HOM05D002952 ORTHO05D003361 9.9e-13 77.8 153 35.3
Gorai.006G150500 Gossypium raimondii HOM05D002952 ORTHO05D003361 1.7e-12 77.0 150 30.7
Gohir.D09G131900 Gossypium hirsutum HOM05D002952 ORTHO05D003361 2.2e-12 76.6 150 30.0
Gohir.A09G135300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 3.7e-12 75.9 150 30.7
Haze_19692 Corylus avellana HOM05D002952 ORTHO05D003361 4.9e-12 75.5 152 32.2
PGR004G2265 Punica granatum HOM05D002952 ORTHO05D003361 6.4e-12 75.1 151 33.8
Cfa016675 Carpinus fangiana HOM05D002952 ORTHO05D003361 8.4e-12 74.7 151 30.5
Glyma.02G198100 Glycine max HOM05D002952 ORTHO05D003361 8.4e-12 74.7 149 30.2
QL07p037253 Quercus lobata HOM05D002952 ORTHO05D003361 1.4e-11 73.9 151 31.8
CANSAT64G1472 Cannabis sativa HOM05D002952 ORTHO05D003361 1.9e-11 73.6 164 30.5
Potri.006G204600 Populus trichocarpa HOM05D002952 ORTHO05D003361 2.4e-11 73.2 150 31.3
FAN09G1177 Fragaria x ananassa HOM05D002952 ORTHO05D003361 4.1e-11 72.4 154 33.8
Psat6g084840 Pisum sativum HOM05D002952 ORTHO05D003361 4.1e-11 72.4 150 30.7
FvH4_6g20080 Fragaria vesca HOM05D002952 ORTHO05D003361 5.4e-11 72.0 152 32.9
Thecc.05G101800 Theobroma cacao HOM05D002952 ORTHO05D003361 5.4e-11 72.0 150 29.3
HanXRQChr03g0065431 Helianthus annuus HOM05D002952 ORTHO05D003361 7.1e-11 71.6 96 42.7
CSS0009413 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 1.6e-10 70.5 152 31.6
Ca_11716_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 1.6e-10 70.5 150 31.3
FAN05G1787 Fragaria x ananassa HOM05D002952 ORTHO05D003361 1.6e-10 70.5 152 32.2
FAN14G0567 Fragaria x ananassa HOM05D002952 ORTHO05D003361 2.7e-10 69.7 152 32.2
PSO384G1939 Papaver somniferum HOM05D002952 ORTHO05D003361 7.8e-10 68.2 151 31.1
Manes.08G032200 Manihot esculenta HOM05D002952 ORTHO05D003361 1.3e-09 67.4 154 29.9
Nn6g34739 Nelumbo nucifera HOM05D002952 ORTHO05D003361 1.7e-09 67.0 152 30.9
Glyma.10G078851 Glycine max HOM05D002952 ORTHO05D003361 2.3e-09 66.6 130 29.2
MD14G1036800 Malus domestica HOM05D002952 ORTHO05D003361 3.9e-09 65.9 150 32.0
vmacro08846 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 3.9e-09 65.9 154 31.8
Atru.chr8.1386 Acer truncatum HOM05D002952 ORTHO05D003361 6.6e-09 65.1 128 30.5
Rhsim04G0130200 Rhododendron simsii HOM05D002952 ORTHO05D003361 8.6e-09 64.7 153 28.1
Ciclev10011126m.g Citrus clementina HOM05D002952 ORTHO05D003361 1.1e-08 64.3 150 27.3
Cc06_g06410 Coffea canephora HOM05D002952 ORTHO05D003361 1.1e-08 64.3 151 31.1
Dinv12331 Davidia involucrata HOM05D002952 ORTHO05D003361 1.9e-08 63.5 151 29.8
GSVIVG01033943001 Vitis vinifera HOM05D002952 ORTHO05D003361 2.5e-08 63.2 150 30.0
Eucgr.A02600 Eucalyptus grandis HOM05D002952 ORTHO05D003361 3.3e-08 62.8 149 28.9
ATR0772G085 Amborella trichopoda HOM05D002952 ORTHO05D003361 7.3e-08 61.6 73 41.1
MD12G1037800 Malus domestica HOM05D002952 ORTHO05D003361 1.6e-07 60.5 151 29.8
FAN02G4506 Fragaria x ananassa HOM05D002952 ORTHO05D003361 4.7e-07 58.9 152 30.9
Lj1C1049T3 Lonicera japonica HOM05D002952 ORTHO05D003361 4.0e-06 55.8 150 27.3


User provided reference genes

Program Settings