Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1890 Ceratophyllum demersum HOM05D006378 ORTHO05D007959 1.9e-71 272.3 131 100.0
TAR383G0342 Trochodendron aralioides HOM05D006378 ORTHO05D007959 1.9e-42 176.0 216 46.3
MBI19_g16222_MAGBIO Magnolia biondii HOM05D006378 ORTHO05D007959 5.4e-42 174.5 216 47.2
Aqoxy7G04130 Aquilegia oxysepala HOM05D006378 ORTHO05D007959 7.1e-42 174.1 216 45.4
Haze_26013 Corylus avellana HOM05D006378 ORTHO05D007959 7.8e-41 170.6 216 44.9
Cpa.g.sc28.38 Carica papaya HOM05D006378 ORTHO05D007959 1.0e-40 170.2 216 44.4
Manes.03G040400 Manihot esculenta HOM05D006378 ORTHO05D007959 1.0e-40 170.2 216 43.1
MSTRG.19459 Avicennia marina HOM05D006378 ORTHO05D007959 1.3e-40 169.9 216 44.9
Gorai.010G088400 Gossypium raimondii HOM05D006378 ORTHO05D007959 1.3e-40 169.9 216 44.0
Lj7C687T7 Lonicera japonica HOM05D006378 ORTHO05D007959 1.3e-40 169.9 216 45.8
Duzib168G0703 Durio zibethinus HOM05D006378 ORTHO05D007959 1.7e-40 169.5 216 44.4
SGA_v2.0_scaffold91G28112 Striga asiatica HOM05D006378 ORTHO05D007959 1.7e-40 169.5 215 44.2
Lsat_1_v5_gn_8_86460 Lactuca sativa HOM05D006378 ORTHO05D007959 3.0e-40 168.7 216 44.0
vmacro06342 Vaccinium macrocarpon HOM05D006378 ORTHO05D007959 3.9e-40 168.3 216 44.9
Potri.006G141900 Populus trichocarpa HOM05D006378 ORTHO05D007959 5.1e-40 167.9 216 44.9
Thecc.09G076800 Theobroma cacao HOM05D006378 ORTHO05D007959 5.1e-40 167.9 216 43.5
Gohir.A06G076500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 6.6e-40 167.5 216 43.5
Atru.chr7.1707 Acer truncatum HOM05D006378 ORTHO05D007959 8.7e-40 167.2 216 44.4
CANSAT56G1041 Cannabis sativa HOM05D006378 ORTHO05D007959 8.7e-40 167.2 216 42.1
FAN26G1418 Fragaria x ananassa HOM05D006378 ORTHO05D007959 8.7e-40 167.2 216 43.5
Oeu035912.1 Olea europaea HOM05D006378 ORTHO05D007959 8.7e-40 167.2 215 46.0
Gohir.D06G075500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 1.5e-39 166.4 216 43.1
Sabra06G0111000 Salix brachista HOM05D006378 ORTHO05D007959 1.9e-39 166.0 216 44.4
AUR62028935 Chenopodium quinoa HOM05D006378 ORTHO05D007959 2.5e-39 165.6 216 44.4
ATR0598G254 Amborella trichopoda HOM05D006378 ORTHO05D007959 3.3e-39 165.2 216 43.5
Cfa002988 Carpinus fangiana HOM05D006378 ORTHO05D007959 3.3e-39 165.2 216 44.4
FvH4_1g08650 Fragaria vesca HOM05D006378 ORTHO05D007959 3.3e-39 165.2 216 43.1
FAN19G1878 Fragaria x ananassa HOM05D006378 ORTHO05D007959 3.3e-39 165.2 216 43.1
HanXRQChr06g0178331 Helianthus annuus HOM05D006378 ORTHO05D007959 3.3e-39 165.2 216 43.5
TWI34G0472 Tripterygium wilfordii HOM05D006378 ORTHO05D007959 3.3e-39 165.2 216 44.4
CAN.G62.5 Capsicum annuum HOM05D006378 ORTHO05D007959 4.3e-39 164.9 216 44.0
FAN26G3001 Fragaria x ananassa HOM05D006378 ORTHO05D007959 4.3e-39 164.9 216 43.1
PSO135G0915 Papaver somniferum HOM05D006378 ORTHO05D007959 5.6e-39 164.5 216 43.1
Nitab4.5_0000343g0150 Nicotiana tabacum HOM05D006378 ORTHO05D007959 7.3e-39 164.1 215 43.7
Nitab4.5_0009436g0010 Nicotiana tabacum HOM05D006378 ORTHO05D007959 7.3e-39 164.1 216 44.0
Peaxi162Scf00127g01816 Petunia axillaris HOM05D006378 ORTHO05D007959 7.3e-39 164.1 216 43.5
Ciclev10007418m.g Citrus clementina HOM05D006378 ORTHO05D007959 9.6e-39 163.7 216 43.1
Migut.J00925 Erythranthe guttata HOM05D006378 ORTHO05D007959 9.6e-39 163.7 216 43.5
Prupe.7G198800 Prunus persica HOM05D006378 ORTHO05D007959 9.6e-39 163.7 216 41.7
Solyc07g041870.3 Solanum lycopersicum HOM05D006378 ORTHO05D007959 9.6e-39 163.7 216 43.5
Sopen07g021350 Solanum pennellii HOM05D006378 ORTHO05D007959 9.6e-39 163.7 216 43.5
DCAR_011949 Daucus carota HOM05D006378 ORTHO05D007959 1.6e-38 162.9 217 44.7
Rhsim03G0227500 Rhododendron simsii HOM05D006378 ORTHO05D007959 1.6e-38 162.9 216 44.0
Sc08g0008890 Simmondsia chinensis HOM05D006378 ORTHO05D007959 1.6e-38 162.9 216 43.1
AUR62025249 Chenopodium quinoa HOM05D006378 ORTHO05D007959 2.1e-38 162.5 216 44.0
PGR044G1219 Punica granatum HOM05D006378 ORTHO05D007959 2.1e-38 162.5 216 42.1
RcHm_v2.0_Chr2g0094931 Rosa chinensis HOM05D006378 ORTHO05D007959 2.1e-38 162.5 216 42.6
Cc06_g12180 Coffea canephora HOM05D006378 ORTHO05D007959 2.8e-38 162.2 216 44.4
SalBow6G1560 Salvia bowleyana HOM05D006378 ORTHO05D007959 2.8e-38 162.2 216 43.1
Hund08780 Selenicereus undatus HOM05D006378 ORTHO05D007959 3.6e-38 161.8 216 42.6
PGSC0003DMG400019029 Solanum tuberosum HOM05D006378 ORTHO05D007959 3.6e-38 161.8 216 43.1
COL.COLO4_18097 Corchorus olitorius HOM05D006378 ORTHO05D007959 4.8e-38 161.4 215 42.3
QL11p000773 Quercus lobata HOM05D006378 ORTHO05D007959 4.8e-38 161.4 103 70.9
EL10Ac8g19061 Beta vulgaris HOM05D006378 ORTHO05D007959 8.1e-38 160.6 216 42.1
CSS0003361 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 1.4e-37 159.8 216 43.1
ECA236G3597 Erigeron canadensis HOM05D006378 ORTHO05D007959 1.4e-37 159.8 216 42.6
Eucgr.C03329 Eucalyptus grandis HOM05D006378 ORTHO05D007959 1.4e-37 159.8 216 42.6
GSVIVG01015082001 Vitis vinifera HOM05D006378 ORTHO05D007959 1.8e-37 159.5 216 42.6
CsaV3_1G041050 Cucumis sativus L. HOM05D006378 ORTHO05D007959 2.4e-37 159.1 216 43.1
Eucgr.C03264 Eucalyptus grandis HOM05D006378 ORTHO05D007959 3.1e-37 158.7 216 42.1
MD15G1217600 Malus domestica HOM05D006378 ORTHO05D007959 3.1e-37 158.7 216 41.2
Nn8g38637 Nelumbo nucifera HOM05D006378 ORTHO05D007959 4.0e-37 158.3 196 49.0
Os03g0179000 Oryza sativa ssp. japonica HOM05D006378 ORTHO05D007959 6.9e-37 157.5 216 43.1
Dinv42394 Davidia involucrata HOM05D006378 ORTHO05D007959 9.0e-37 157.1 216 43.1
Ah.09g231620 Amaranthus hybridus HOM05D006378 ORTHO05D007959 2.0e-36 156.0 216 41.7
CSS0014220 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 2.0e-36 156.0 216 42.6
ClCG03G015080 Citrullus lanatus HOM05D006378 ORTHO05D007959 2.0e-36 156.0 227 41.4
MELO3C015521.2 Cucumis melo HOM05D006378 ORTHO05D007959 3.4e-36 155.2 216 41.7
THA.LOC104826591 Tarenaya hassleriana HOM05D006378 ORTHO05D007959 3.4e-36 155.2 103 66.0
arahy.Tifrunner.gnm1.ann1.LZ43MP Arachis hypogaea HOM05D006378 ORTHO05D007959 9.9e-36 153.7 103 69.9
Thhalv10003638m.g Eutrema salsugineum HOM05D006378 ORTHO05D007959 9.9e-36 153.7 103 66.0
Sed0026053 Sechium edule HOM05D006378 ORTHO05D007959 9.9e-36 153.7 216 42.1
VMungo1309G1044 Vigna mungo HOM05D006378 ORTHO05D007959 9.9e-36 153.7 216 42.6
Hma1.2p1_0179F.1_g079520 Hydrangea macrophylla HOM05D006378 ORTHO05D007959 1.3e-35 153.3 104 68.3
Lalb_Chr08g0232591 Lupinus albus HOM05D006378 ORTHO05D007959 4.9e-35 151.4 216 42.1
AL2G37770 Arabidopsis lyrata HOM05D006378 ORTHO05D007959 6.4e-35 151.0 217 40.1
Phvul.009G227300 Phaseolus vulgaris HOM05D006378 ORTHO05D007959 6.4e-35 151.0 216 42.1
TPR.G28586 Trifolium pratense HOM05D006378 ORTHO05D007959 6.4e-35 151.0 216 42.1
BcaB06g26949 Brassica carinata HOM05D006378 ORTHO05D007959 8.4e-35 150.6 103 65.0
Glyma.15G177600 Glycine max HOM05D006378 ORTHO05D007959 1.4e-34 149.8 216 41.7
Medtr2g041640 Medicago truncatula HOM05D006378 ORTHO05D007959 1.4e-34 149.8 216 42.6
AT1G77550 Arabidopsis thaliana HOM05D006378 ORTHO05D007959 3.2e-34 148.7 216 39.8
Carub.0002s2445 Capsella rubella HOM05D006378 ORTHO05D007959 3.2e-34 148.7 217 39.6
CARHR071080 Cardamine hirsuta HOM05D006378 ORTHO05D007959 3.2e-34 148.7 217 39.6
Lj6g0025012 Lotus japonicus HOM05D006378 ORTHO05D007959 3.2e-34 148.7 216 41.7
Sp7g06720 Schrenkiella parvula HOM05D006378 ORTHO05D007959 3.2e-34 148.7 103 65.0
Psat1g134280 Pisum sativum HOM05D006378 ORTHO05D007959 4.2e-34 148.3 208 42.3
Pp3c6_19960 Physcomitrium patens HOM05D006378 ORTHO05D007959 7.1e-34 147.5 107 61.7
SMO174G0008 Selaginella moellendorffii HOM05D006378 ORTHO05D007959 7.1e-34 147.5 107 61.7
Ca_02206_v3 Cicer arietinum L. HOM05D006378 ORTHO05D007959 9.3e-34 147.1 208 41.8
BcaC02g09569 Brassica carinata HOM05D006378 ORTHO05D007959 1.2e-33 146.7 103 64.1
A04p10600 Brassica napus HOM05D006378 ORTHO05D007959 1.2e-33 146.7 103 64.1
C04p44250 Brassica napus HOM05D006378 ORTHO05D007959 1.2e-33 146.7 103 64.1
BolC4t25998H Brassica oleracea HOM05D006378 ORTHO05D007959 1.2e-33 146.7 103 64.1
BraA04t16723Z Brassica rapa HOM05D006378 ORTHO05D007959 1.2e-33 146.7 103 64.1
arahy.Tifrunner.gnm1.ann1.CBKZ0V Arachis hypogaea HOM05D006378 ORTHO05D007959 4.6e-33 144.8 96 68.8
unitig_578.g15677 Utricularia gibba HOM05D006378 ORTHO05D007959 1.3e-32 143.3 100 64.0
Aa31LG2G20840 Aethionema arabicum HOM05D006378 ORTHO05D007959 5.6e-31 137.9 102 60.8
AagrBONN_evm.TU.Sc2ySwM_117.2900 Anthoceros agrestis HOM05D006378 ORTHO05D007959 7.4e-31 137.5 217 37.3
Mapoly0113s0055 Marchantia polymorpha HOM05D006378 ORTHO05D007959 3.1e-29 132.1 107 54.2
CAN.G81.10 Capsicum annuum HOM05D006378 ORTHO05D007959 2.0e-28 129.4 95 62.1
HPP92_002164 Vanilla planifolia HOM05D006378 ORTHO05D007959 4.5e-28 128.3 200 37.0
SHI02335 Sapria himalayana HOM05D006378 ORTHO05D007959 3.3e-23 112.1 90 58.9
CBR_g12041 Chara braunii HOM05D006378 ORTHO05D007959 8.1e-22 107.5 102 47.1
RcHm_v2.0_Chr2g0095081 Rosa chinensis HOM05D006378 ORTHO05D007959 1.0e-19 100.5 87 57.5
SEGI_37917 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 2.6e-12 75.9 55 60.0
Actinidia29934 Actinidia chinensis HOM05D006378 ORTHO05D007959 3.0e-08 62.4 32 81.2


User provided reference genes

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