Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 1.5e-200 702.6 348 100.0
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 1.8e-129 466.5 369 65.6
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 2.7e-125 452.6 366 62.6
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 8.0e-125 451.1 384 62.0
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 1.2e-123 447.2 362 64.1
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 2.0e-123 446.4 362 64.4
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 3.4e-123 445.7 370 64.1
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 1.4e-121 440.3 380 61.1
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 1.8e-121 439.9 378 61.1
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 1.8e-121 439.9 378 61.4
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 1.8e-121 439.9 378 62.2
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 2.4e-121 439.5 372 62.4
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 7.0e-121 438.0 369 62.3
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 4.5e-120 435.3 372 61.8
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 2.9e-119 432.6 378 60.1
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 3.8e-119 432.2 353 64.3
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 5.0e-119 431.8 369 60.7
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 6.5e-119 431.4 371 62.8
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 6.5e-119 431.4 372 62.6
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 1.2e-117 427.2 378 59.3
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 1.2e-117 427.2 372 61.3
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.2e-117 427.2 372 61.3
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.1e-117 426.4 372 61.3
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.1e-117 426.4 375 60.8
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 2.1e-117 426.4 383 60.3
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 2.1e-117 426.4 383 60.3
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 2.7e-117 426.0 375 61.3
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 3.6e-117 425.6 389 60.2
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 3.6e-117 425.6 369 61.8
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 4.7e-117 425.2 372 60.8
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 4.7e-117 425.2 369 60.4
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 8.0e-117 424.5 396 58.8
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 1.4e-116 423.7 369 61.0
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 3.0e-116 422.5 368 61.1
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 1.2e-115 420.6 383 59.3
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 2.6e-115 419.5 379 58.8
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 3.4e-115 419.1 383 59.8
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 5.7e-115 418.3 369 60.7
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 7.5e-115 417.9 387 59.9
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 7.5e-115 417.9 370 59.5
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 9.8e-115 417.5 370 59.2
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.7e-114 416.8 369 60.4
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 6.3e-114 414.8 371 58.8
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 6.3e-114 414.8 371 58.8
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 1.4e-113 413.7 372 58.9
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 1.8e-113 413.3 368 59.5
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 2.4e-113 412.9 368 59.5
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 2.4e-113 412.9 369 59.6
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 4.1e-113 412.1 372 58.9
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 4.1e-113 412.1 372 57.3
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 5.9e-112 408.3 368 58.4
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 5.9e-112 408.3 393 56.2
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 5.9e-112 408.3 367 59.4
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 1.0e-111 407.5 370 58.1
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 2.3e-111 406.4 369 58.3
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 2.9e-111 406.0 370 58.1
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 2.9e-111 406.0 370 58.1
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 3.8e-111 405.6 369 58.3
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 1.9e-110 403.3 369 56.6
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 2.1e-109 399.8 349 61.0
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 2.8e-109 399.4 387 56.8
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 4.7e-109 398.7 428 53.7
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 4.7e-109 398.7 348 61.2
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 6.1e-109 398.3 393 56.0
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 8.0e-109 397.9 370 56.8
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 1.0e-108 397.5 373 55.5
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 2.3e-108 396.4 370 57.6
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 2.3e-108 396.4 347 60.5
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 2.3e-108 396.4 369 55.3
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 5.2e-108 395.2 374 57.2
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 5.2e-108 395.2 376 57.2
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 5.2e-108 395.2 369 56.9
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 1.2e-107 394.0 353 60.9
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 2.0e-107 393.3 388 53.6
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 3.4e-107 392.5 369 56.1
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 9.8e-107 391.0 370 55.1
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 1.7e-106 390.2 380 55.0
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 2.2e-106 389.8 369 55.0
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 3.7e-106 389.0 380 54.7
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 3.7e-106 389.0 380 54.7
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 6.4e-106 388.3 354 59.9
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 7.0e-105 384.8 370 55.7
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 2.0e-104 383.3 383 55.4
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 2.7e-104 382.9 334 58.1
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 4.6e-104 382.1 387 53.7
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 5.0e-103 378.6 380 53.9
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 8.6e-103 377.9 349 57.6
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 1.5e-102 377.1 442 47.7
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 2.5e-102 376.3 420 50.7
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 2.1e-101 373.2 369 52.6
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 4.7e-101 372.1 384 53.6
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 8.0e-101 371.3 381 54.1
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 1.7e-98 363.6 370 53.0
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 4.6e-96 355.5 378 51.3
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 1.1e-94 350.9 364 52.7
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 1.2e-93 347.4 320 58.8
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 2.2e-90 336.7 384 50.0
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 1.0e-87 327.8 371 48.2
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 8.6e-87 324.7 368 47.8
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 7.6e-83 311.6 343 51.3
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 2.6e-75 286.6 225 62.2
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 8.4e-74 281.6 334 46.7
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 6.0e-72 275.4 217 60.8
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 2.1e-69 266.9 217 59.4
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 4.4e-67 259.2 294 51.4
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.1e-65 254.6 361 44.0
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 5.6e-62 242.3 388 39.9
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 2.6e-59 233.4 381 38.6
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 1.2e-43 181.4 135 68.1
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 3.4e-43 179.9 194 55.2
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 1.1e-41 174.9 199 48.7
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 2.7e-40 170.2 139 61.2
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 2.0e-35 154.1 102 70.6
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 1.0e-34 151.8 132 56.8
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 5.0e-34 149.4 97 73.2
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 2.3e-23 114.0 82 65.9
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 2.0e-22 110.9 139 49.6
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.4e-20 104.0 110 51.8
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 2.0e-19 100.9 67 67.2
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 1.6e-16 91.3 344 27.0
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 8.0e-16 89.0 82 56.1
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 8.8e-15 85.5 88 52.3
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 4.1e-12 76.6 113 43.4
Rhsim05G0138400 Rhododendron simsii HOM05D005191 ORTHO05D006725 9.1e-12 75.5 96 47.9
Rhsim10G0150400 Rhododendron simsii HOM05D005191 ORTHO05D030537 4.5e-11 73.2 52 69.2
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 5.9e-11 72.8 387 26.4
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 7.7e-11 72.4 74 55.4
COL.COLO4_23752 Corchorus olitorius HOM05D005191 ORTHO05D016248 6.5e-10 69.3 55 67.3
COL.COLO4_21409 Corchorus olitorius HOM05D005191 ORTHO05D016248 1.5e-09 68.2 57 64.9
GSVIVG01012804001 Vitis vinifera HOM05D005191 ORTHO05D006725 4.2e-09 66.6 60 53.3
Thhalv10022959m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 2.7e-08 63.9 97 37.1
Sp3g26280 Schrenkiella parvula HOM05D005191 ORTHO05D012938 2.7e-08 63.9 46 56.5


User provided reference genes

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