Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1850 Ceratophyllum demersum HOM05D005158 ORTHO05D005510 1.7e-255 885.6 458 100.0
TAR374G1701 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.7e-128 463.0 476 55.9
GSVIVG01011734001 Vitis vinifera HOM05D005158 ORTHO05D005510 3.3e-126 456.1 466 54.9
QL03p033448 Quercus lobata HOM05D005158 ORTHO05D005510 7.3e-126 454.9 349 66.2
Nn4g24217 Nelumbo nucifera HOM05D005158 ORTHO05D005510 2.1e-125 453.4 381 61.2
Duzib251G0375 Durio zibethinus HOM05D005158 ORTHO05D005510 1.8e-124 450.3 466 55.8
Prupe.1G327200 Prunus persica HOM05D005158 ORTHO05D005510 5.2e-124 448.7 420 60.2
FAN17G2123 Fragaria x ananassa HOM05D005158 ORTHO05D005510 2.0e-123 446.8 378 62.2
Sabra10G0081500 Salix brachista HOM05D005158 ORTHO05D005510 9.8e-123 444.5 350 66.9
MD16G1026300 Malus domestica HOM05D005158 ORTHO05D005510 1.7e-122 443.7 349 66.5
Actinidia36249 Actinidia chinensis HOM05D005158 ORTHO05D005510 2.2e-122 443.4 460 54.8
FvH4_4g32690 Fragaria vesca HOM05D005158 ORTHO05D005510 2.9e-122 443.0 351 65.5
Potri.010G111100 Populus trichocarpa HOM05D005158 ORTHO05D005510 8.3e-122 441.4 351 66.1
FAN12G3950 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.4e-121 440.7 351 65.2
RcHm_v2.0_Chr4g0441611 Rosa chinensis HOM05D005158 ORTHO05D005510 1.9e-121 440.3 462 56.5
CSS0029988 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 4.1e-121 439.1 348 64.4
COL.COLO4_13149 Corchorus olitorius HOM05D005158 ORTHO05D005510 1.2e-120 437.6 351 65.2
Manes.17G078700 Manihot esculenta HOM05D005158 ORTHO05D005510 1.2e-120 437.6 351 65.5
CAN.G236.18 Capsicum annuum HOM05D005158 ORTHO05D005510 2.0e-120 436.8 410 57.8
Eucgr.G02179 Eucalyptus grandis HOM05D005158 ORTHO05D005510 2.7e-120 436.4 349 63.0
PSO017G1154 Papaver somniferum HOM05D005158 ORTHO05D005510 1.3e-119 434.1 364 61.0
PSO478G5200 Papaver somniferum HOM05D005158 ORTHO05D005510 3.9e-119 432.6 354 61.9
ATR0665G468 Amborella trichopoda HOM05D005158 ORTHO05D005510 6.6e-119 431.8 345 64.6
CANSAT64G2776 Cannabis sativa HOM05D005158 ORTHO05D005510 8.6e-119 431.4 480 52.7
Haze_10977 Corylus avellana HOM05D005158 ORTHO05D005510 1.1e-118 431.0 409 57.2
Phvul.003G032200 Phaseolus vulgaris HOM05D005158 ORTHO05D005510 1.5e-118 430.6 443 56.0
Ciclev10015117m.g Citrus clementina HOM05D005158 ORTHO05D005510 7.3e-118 428.3 350 63.4
GSVIVG01008427001 Vitis vinifera HOM05D005158 ORTHO05D005510 9.5e-118 427.9 365 59.7
Sopen05g014580 Solanum pennellii HOM05D005158 ORTHO05D005510 8.1e-117 424.9 341 62.5
QL10p028515 Quercus lobata HOM05D005158 ORTHO05D005510 1.1e-116 424.5 375 59.5
Aqoxy3G00071 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.8e-116 423.7 357 61.3
Carub.0002s1765 Capsella rubella HOM05D005158 ORTHO05D005510 1.8e-116 423.7 351 60.1
Cc11_g08400 Coffea canephora HOM05D005158 ORTHO05D005510 1.8e-116 423.7 349 60.5
Dinv27619 Davidia involucrata HOM05D005158 ORTHO05D005510 2.3e-116 423.3 349 59.9
MSTRG.13599 Avicennia marina HOM05D005158 ORTHO05D005510 5.2e-116 422.2 414 56.8
Cc11_g08410 Coffea canephora HOM05D005158 ORTHO05D005510 6.8e-116 421.8 381 56.7
MELO3C014995.2 Cucumis melo HOM05D005158 ORTHO05D005510 6.8e-116 421.8 350 61.4
CsaV3_5G015040 Cucumis sativus L. HOM05D005158 ORTHO05D005510 6.8e-116 421.8 350 61.7
HanXRQChr08g0212241 Helianthus annuus HOM05D005158 ORTHO05D005510 1.5e-115 420.6 462 51.3
Lalb_Chr17g0338591 Lupinus albus HOM05D005158 ORTHO05D005510 2.6e-115 419.9 409 56.7
ClCG07G007220 Citrullus lanatus HOM05D005158 ORTHO05D005510 3.4e-115 419.5 350 61.7
Sc14g0006290 Simmondsia chinensis HOM05D005158 ORTHO05D005510 4.4e-115 419.1 457 53.8
Sc14g0007050 Simmondsia chinensis HOM05D005158 ORTHO05D005510 4.4e-115 419.1 347 63.7
Sed0000270 Sechium edule HOM05D005158 ORTHO05D005510 7.5e-115 418.3 445 51.7
Cfa008628 Carpinus fangiana HOM05D005158 ORTHO05D005510 1.7e-114 417.2 418 56.7
CiPaw.05G195800 Carya illinoinensis HOM05D005158 ORTHO05D005510 8.3e-114 414.8 411 53.5
Ciclev10008271m.g Citrus clementina HOM05D005158 ORTHO05D005510 8.3e-114 414.8 376 58.8
PGR119G0382 Punica granatum HOM05D005158 ORTHO05D005510 1.1e-113 414.5 349 60.2
vmacro00408 Vaccinium macrocarpon HOM05D005158 ORTHO05D005510 1.4e-113 414.1 537 49.0
SalBow8G1650 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.9e-113 413.7 463 53.3
Migut.L00352 Erythranthe guttata HOM05D005158 ORTHO05D005510 5.4e-113 412.1 398 56.0
SalBow8G5629 Salvia bowleyana HOM05D005158 ORTHO05D005510 9.2e-113 411.4 463 52.9
CSS0029687 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 1.6e-112 410.6 339 61.9
Dinv28033 Davidia involucrata HOM05D005158 ORTHO05D005510 3.5e-112 409.5 423 54.8
Thecc.03G054800 Theobroma cacao HOM05D005158 ORTHO05D005510 6.0e-112 408.7 468 49.8
FAN04G1228 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.0e-111 407.9 469 49.9
COL.COLO4_37683 Corchorus olitorius HOM05D000282 ORTHO05D005510 1.3e-111 407.5 372 55.6
MD06G1226600 Malus domestica HOM05D005158 ORTHO05D005510 1.7e-111 407.1 479 49.3
RcHm_v2.0_Chr7g0178481 Rosa chinensis HOM05D005158 ORTHO05D005510 3.0e-111 406.4 472 49.4
Lj2g0016958 Lotus japonicus HOM05D005158 ORTHO05D005510 3.9e-111 406.0 340 61.8
FAN22G1395 Fragaria x ananassa HOM05D005158 ORTHO05D005510 5.1e-111 405.6 351 61.8
SGA_v2.0_scaffold234G43623 Striga asiatica HOM05D005158 ORTHO05D005510 2.5e-110 403.3 350 61.1
MSTRG.4576 Avicennia marina HOM05D005158 ORTHO05D005510 3.3e-110 402.9 437 51.0
CiPaw.15G143000 Carya illinoinensis HOM05D005158 ORTHO05D005510 4.3e-110 402.5 351 60.1
Lsat_1_v5_gn_8_45001 Lactuca sativa HOM05D005158 ORTHO05D005510 7.3e-110 401.7 463 51.8
Haze_18844 Corylus avellana HOM05D005158 ORTHO05D005510 2.1e-109 400.2 405 54.6
FvH4_5g11940 Fragaria vesca HOM05D005158 ORTHO05D005510 6.2e-109 398.7 338 61.8
FvH4_5g17290 Fragaria vesca HOM05D005158 ORTHO05D005510 2.4e-108 396.7 469 49.3
CSS0001942 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.8e-108 395.2 306 66.7
Sabra15G0037900 Salix brachista HOM05D005158 ORTHO05D005510 2.0e-107 393.7 349 58.7
TWI75G0580 Tripterygium wilfordii HOM05D005158 ORTHO05D005510 2.0e-107 393.7 396 56.6
AUR62014187 Chenopodium quinoa HOM05D005158 ORTHO05D005510 2.6e-107 393.3 376 56.1
FAN18G4517 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.6e-107 391.7 346 60.4
Os03g0707200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 9.9e-107 391.3 295 65.8
Ah.02g127790 Amaranthus hybridus HOM05D005158 ORTHO05D005510 1.3e-106 391.0 421 53.2
FAN13G1699 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.3e-106 391.0 367 57.2
FAN18G3280 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.1e-105 387.9 355 58.9
Migut.D01553 Erythranthe guttata HOM05D005158 ORTHO05D005510 1.4e-105 387.5 350 55.4
HanXRQChr08g0212251 Helianthus annuus HOM05D005158 ORTHO05D005510 2.4e-105 386.7 359 57.4
Oeu046166.1 Olea europaea HOM05D005158 ORTHO05D005510 7.1e-105 385.2 349 56.2
Duzib205G1388 Durio zibethinus HOM05D005158 ORTHO05D005510 3.5e-104 382.9 468 47.4
ECA233G1067 Erigeron canadensis HOM05D005158 ORTHO05D005510 7.8e-104 381.7 320 60.6
FAN18G0401 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.8e-104 381.7 419 50.8
Cc04_g06310 Coffea canephora HOM05D005158 ORTHO05D005510 1.0e-103 381.3 374 53.5
FAN08G3331 Fragaria x ananassa HOM05D005158 ORTHO05D005510 1.5e-102 377.5 330 60.6
Lj6A744G51 Lonicera japonica HOM05D005158 ORTHO05D005510 7.3e-102 375.2 318 63.2
Atru.chr9.1740 Acer truncatum HOM05D005158 ORTHO05D005510 4.0e-100 369.4 439 51.3
SalBow1G1317 Salvia bowleyana HOM05D005158 ORTHO05D005510 1.6e-96 357.5 297 59.3
Hund20682 Selenicereus undatus HOM05D005158 ORTHO05D005510 2.5e-94 350.1 257 66.9
AUR62039517 Chenopodium quinoa HOM05D005158 ORTHO05D005510 6.2e-93 345.5 486 45.7
CSS0046275 Camellia sinensis var. sinensis HOM05D005158 ORTHO05D005510 6.9e-92 342.0 323 56.3
Rhsim09G0065800 Rhododendron simsii HOM05D005158 ORTHO05D005510 2.0e-91 340.5 253 70.0
Rhsim09G0065900 Rhododendron simsii HOM05D005158 ORTHO05D005510 4.9e-90 335.9 253 69.2
Peaxi162Scf00159g01112 Petunia axillaris HOM05D005158 ORTHO05D005510 1.0e-87 328.2 272 61.8
VMungo1215G0718 Vigna mungo HOM05D005158 ORTHO05D005510 1.8e-87 327.4 353 52.1
HPP92_016306 Vanilla planifolia HOM05D005158 ORTHO05D005510 3.0e-87 326.6 307 58.0
FAN13G2578 Fragaria x ananassa HOM05D005158 ORTHO05D005510 8.7e-87 325.1 367 51.2
HPP92_016287 Vanilla planifolia HOM05D005158 ORTHO05D005510 5.5e-73 279.3 231 60.6
Dinv14415 Davidia involucrata HOM05D005158 ORTHO05D005510 3.5e-72 276.6 348 48.3
Solyc05g017900.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 2.5e-70 270.4 227 61.7
Prupe.5G232900 Prunus persica HOM05D005158 ORTHO05D005510 1.7e-66 257.7 237 55.7
Pp3c5_19920 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.9e-66 256.9 295 44.7
Zm00001eb054470 Zea mays HOM05D005158 ORTHO05D005510 9.4e-65 251.9 220 59.1
Potri.008G130950 Populus trichocarpa HOM05D005158 ORTHO05D005510 4.5e-59 233.0 282 50.4
AUR62014186 Chenopodium quinoa HOM05D005158 ORTHO05D005510 1.3e-58 231.5 277 46.9
Thecc.02G284700 Theobroma cacao HOM05D005158 ORTHO05D005510 1.1e-57 228.4 210 57.1
FAN07G0555 Fragaria x ananassa HOM05D005158 ORTHO05D005510 7.4e-54 215.7 218 56.0
AagrBONN_evm.TU.Sc2ySwM_344.3657 Anthoceros agrestis HOM05D005158 ORTHO05D005510 4.8e-53 213.0 243 46.5
Oeu003374.1 Olea europaea HOM05D005158 ORTHO05D005510 2.4e-52 210.7 270 48.1
SEGI_17459 Sequoiadendron giganteum HOM05D005158 ORTHO05D005510 3.4e-51 206.8 188 55.3
PRCOL_00003969 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 2.5e-49 200.7 312 37.8
Oeu014055.2 Olea europaea HOM05D005158 ORTHO05D005510 4.2e-49 199.9 179 55.3
HPP92_027195 Vanilla planifolia HOM05D005158 ORTHO05D005510 1.2e-40 171.8 186 49.5
Cpa.g.sc570.2 Carica papaya HOM05D005158 ORTHO05D005510 5.7e-38 162.9 201 47.8
Manes.06G007150 Manihot esculenta HOM05D005158 ORTHO05D005510 1.6e-35 154.8 201 47.8
Zm00001eb280420 Zea mays HOM05D005158 ORTHO05D005510 5.5e-33 146.4 143 51.0
HanXRQChr08g0212291 Helianthus annuus HOM05D005158 ORTHO05D005510 3.0e-31 140.6 115 57.4
Duzib068G0898 Durio zibethinus HOM05D005158 ORTHO05D005510 3.4e-30 137.1 168 46.4
Prupe.5G232800 Prunus persica HOM05D005158 ORTHO05D005510 5.0e-26 123.2 86 66.3
Os06g0269200 Oryza sativa ssp. japonica HOM05D005158 ORTHO05D005510 2.1e-24 117.9 82 65.9
DCAR_007307 Daucus carota HOM05D005158 ORTHO05D005510 1.0e-23 115.5 98 59.2
TAR622G0559 Trochodendron aralioides HOM05D005158 ORTHO05D005510 2.3e-23 114.4 100 62.0
Solyc05g017940.3 Solanum lycopersicum HOM05D005158 ORTHO05D005510 1.2e-22 112.1 97 54.6
PGR044G0956 Punica granatum HOM05D005158 ORTHO05D005510 5.7e-22 109.8 196 38.3
Peaxi162Scf00159g01110 Petunia axillaris HOM05D005158 ORTHO05D005510 7.5e-22 109.4 97 52.6
MD16G1025900 Malus domestica HOM05D005158 ORTHO05D005510 1.3e-21 108.6 78 73.1
Gohir.D02G122150 Gossypium hirsutum HOM05D005158 ORTHO05D005510 6.3e-21 106.3 147 42.9
PRCOL_00000423 Prasinoderma coloniale HOM05D005158 ORTHO05D005510 1.1e-20 105.5 222 32.0
Pp3c9_21990 Physcomitrium patens HOM05D005158 ORTHO05D005510 2.4e-20 104.4 337 28.2
AagrBONN_evm.TU.Sc2ySwM_368.719 Anthoceros agrestis HOM05D005158 ORTHO05D005510 5.4e-20 103.2 307 28.0
Thecc.02G284900 Theobroma cacao HOM05D005158 ORTHO05D005510 7.0e-20 102.8 98 57.1
C06p44960 Brassica napus HOM05D005158 ORTHO05D005510 8.6e-18 95.9 107 54.2
Gorai.005G131900 Gossypium raimondii HOM05D005158 ORTHO05D005510 3.3e-17 94.0 138 39.1
SMO263G0001 Selaginella moellendorffii HOM05D032652 ORTHO05D005510 7.3e-17 92.8 268 27.2
Mapoly0003s0267 Marchantia polymorpha HOM05D032652 ORTHO05D005510 1.2e-16 92.0 334 27.2
MCO07G148 Micromonas commoda HOM05D005158 ORTHO05D005510 2.3e-15 87.8 166 30.1
Pp3c15_24210 Physcomitrium patens HOM05D005158 ORTHO05D005510 6.8e-15 86.3 258 27.9
HanXRQChr08g0212271 Helianthus annuus HOM05D005158 ORTHO05D005510 1.2e-14 85.5 65 66.2
Cpa.g.sc130.33 Carica papaya HOM05D005158 ORTHO05D005510 2.9e-13 80.9 69 53.6
Manes.09G075257 Manihot esculenta HOM05D005158 ORTHO05D005510 1.4e-12 78.6 65 60.0
RcHm_v2.0_Chr7g0199801 Rosa chinensis HOM05D005158 ORTHO05D005510 1.6e-11 75.1 58 62.1
MCO04G437 Micromonas commoda HOM05D005158 ORTHO05D005510 3.9e-10 70.5 314 24.2
MCO07G404 Micromonas commoda HOM05D005158 ORTHO05D005510 1.4e-07 62.0 263 23.2
Aqoxy2G01678 Aquilegia oxysepala HOM05D005158 ORTHO05D005510 1.2e-06 58.9 62 40.3


User provided reference genes

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