Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1837 Ceratophyllum demersum HOM05D007416 ORTHO05D009329 3.9e-63 244.6 119 100.0
Nn1g06362 Nelumbo nucifera HOM05D007416 ORTHO05D009329 6.9e-28 127.5 64 82.8
SGA_v2.0_scaffold309G48156 Striga asiatica HOM05D007416 ORTHO05D009329 2.0e-27 125.9 98 61.2
PSO675G1239 Papaver somniferum HOM05D007416 ORTHO05D009329 2.6e-27 125.6 71 74.6
Thecc.06G178300 Theobroma cacao HOM05D007416 ORTHO05D009329 3.4e-27 125.2 62 87.1
Manes.17G051100 Manihot esculenta HOM05D007416 ORTHO05D009329 5.8e-27 124.4 87 66.7
Oeu012170.1 Olea europaea HOM05D007416 ORTHO05D009329 5.8e-27 124.4 75 73.3
CAN.G361.15 Capsicum annuum HOM05D007416 ORTHO05D009329 7.6e-27 124.0 73 72.6
MELO3C007245.2 Cucumis melo HOM05D007416 ORTHO05D009329 1.3e-26 123.2 66 80.3
Gohir.A02G025200 Gossypium hirsutum HOM05D007416 ORTHO05D009329 1.3e-26 123.2 99 62.6
Gorai.005G035900 Gossypium raimondii HOM05D007416 ORTHO05D009329 1.3e-26 123.2 104 61.5
Cpa.g.sc7.10 Carica papaya HOM05D007416 ORTHO05D009329 1.7e-26 122.9 66 78.8
ClCG01G023400 Citrullus lanatus HOM05D007416 ORTHO05D009329 2.2e-26 122.5 86 66.3
Ciclev10017211m.g Citrus clementina HOM05D007416 ORTHO05D009329 2.2e-26 122.5 92 64.1
ECA234G4626 Erigeron canadensis HOM05D007416 ORTHO05D009329 2.2e-26 122.5 81 67.9
Potri.004G051300 Populus trichocarpa HOM05D007416 ORTHO05D009329 2.2e-26 122.5 81 65.4
Solyc10g008850.2 Solanum lycopersicum HOM05D007416 ORTHO05D009329 2.2e-26 122.5 69 75.4
Sopen10g004640 Solanum pennellii HOM05D007416 ORTHO05D009329 2.2e-26 122.5 69 75.4
PGSC0003DMG400022819 Solanum tuberosum HOM05D007416 ORTHO05D009329 2.2e-26 122.5 69 75.4
CSS0002821 Camellia sinensis var. sinensis HOM05D007416 ORTHO05D009329 2.9e-26 122.1 93 63.4
CsaV3_6G050530 Cucumis sativus L. HOM05D007416 ORTHO05D009329 2.9e-26 122.1 66 78.8
FAN16G3750 Fragaria x ananassa HOM05D007416 ORTHO05D009329 2.9e-26 122.1 83 68.7
Gohir.D02G032400 Gossypium hirsutum HOM05D007416 ORTHO05D009329 2.9e-26 122.1 104 61.5
Sed0002237 Sechium edule HOM05D007416 ORTHO05D009329 2.9e-26 122.1 91 63.7
Peaxi162Scf00248g00011 Petunia axillaris HOM05D007416 ORTHO05D009329 3.8e-26 121.7 65 78.5
Migut.M01088 Erythranthe guttata HOM05D007416 ORTHO05D009329 5.0e-26 121.3 96 61.5
CANSAT35G0095 Cannabis sativa HOM05D007416 ORTHO05D009329 6.5e-26 120.9 66 77.3
COL.COLO4_31395 Corchorus olitorius HOM05D007416 ORTHO05D009329 6.5e-26 120.9 70 74.3
FvH4_3g08330 Fragaria vesca HOM05D007416 ORTHO05D009329 6.5e-26 120.9 82 69.5
Atru.chr10.1755 Acer truncatum HOM05D007416 ORTHO05D009329 1.4e-25 119.8 62 82.3
Dinv17369 Davidia involucrata HOM05D007416 ORTHO05D009329 1.4e-25 119.8 69 73.9
unitig_8.g4633 Utricularia gibba HOM05D007416 ORTHO05D009329 1.4e-25 119.8 68 76.5
unitig_8.g4637 Utricularia gibba HOM05D007416 ORTHO05D009329 1.4e-25 119.8 68 76.5
TWI38G0960 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.9e-25 119.4 62 77.4
Ah.09g237760 Amaranthus hybridus HOM05D007416 ORTHO05D009329 2.5e-25 119.0 63 79.4
Cc02_g14200 Coffea canephora HOM05D007416 ORTHO05D009329 2.5e-25 119.0 63 84.1
Nitab4.5_0002114g0110 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.5e-25 119.0 68 75.0
Nitab4.5_0014582g0020 Nicotiana tabacum HOM05D007416 ORTHO05D009329 2.5e-25 119.0 68 75.0
unitig_8.g4657 Utricularia gibba HOM05D004204 ORTHO05D005069 2.5e-25 119.0 68 76.5
Haze_06330 Corylus avellana HOM05D007416 ORTHO05D009329 3.2e-25 118.6 87 65.5
FAN25G0684 Fragaria x ananassa HOM05D007416 ORTHO05D009329 3.2e-25 118.6 61 85.2
Lsat_1_v5_gn_1_119080 Lactuca sativa HOM05D007416 ORTHO05D009329 3.2e-25 118.6 114 55.3
SGA_v2.0_scaffold16G07657 Striga asiatica HOM05D007416 ORTHO05D009329 4.2e-25 118.2 60 83.3
AUR62014900 Chenopodium quinoa HOM05D007416 ORTHO05D009329 5.5e-25 117.9 113 55.8
RcHm_v2.0_Chr5g0009671 Rosa chinensis HOM05D007416 ORTHO05D009329 5.5e-25 117.9 82 68.3
Sc17g0005840 Simmondsia chinensis HOM05D007416 ORTHO05D009329 5.5e-25 117.9 73 68.5
Cfa000548 Carpinus fangiana HOM05D007416 ORTHO05D009329 7.2e-25 117.5 87 64.4
AUR62031108 Chenopodium quinoa HOM05D007416 ORTHO05D009329 7.2e-25 117.5 111 56.8
Hma1.2p1_1465F.1_g285370 Hydrangea macrophylla HOM05D007416 ORTHO05D009329 7.2e-25 117.5 86 62.8
Prupe.4G055000 Prunus persica HOM05D007416 ORTHO05D009329 7.2e-25 117.5 91 61.5
TAR627G0809 Trochodendron aralioides HOM05D003433 ORTHO05D003921 7.2e-25 117.5 100 58.0
Aqoxy1G02242 Aquilegia oxysepala HOM05D007416 ORTHO05D009329 1.2e-24 116.7 63 77.8
FAN21G3844 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.2e-24 116.7 82 67.1
SalBow8G2036 Salvia bowleyana HOM05D007416 ORTHO05D009329 2.7e-24 115.5 69 72.5
HPP92_005210 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.6e-24 114.8 96 55.2
Os06g0524500 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 6.1e-24 114.4 71 66.2
THA.LOC104812624 Tarenaya hassleriana HOM05D007416 ORTHO05D009329 6.1e-24 114.4 66 74.2
CiPaw.10G054100 Carya illinoinensis HOM05D007416 ORTHO05D009329 1.3e-23 113.2 81 64.2
TWI63G0778 Tripterygium wilfordii HOM05D007416 ORTHO05D009329 1.8e-23 112.8 91 58.2
Glyma.13G152576 Glycine max HOM05D007416 ORTHO05D009329 3.0e-23 112.1 94 60.6
Os06g0525000 Oryza sativa ssp. japonica HOM05D007416 ORTHO05D009329 3.9e-23 111.7 78 61.5
Eucgr.D00578 Eucalyptus grandis HOM05D007416 ORTHO05D009329 5.1e-23 111.3 59 78.0
MD10G1286700 Malus domestica HOM05D007416 ORTHO05D009329 5.1e-23 111.3 62 75.8
HanXRQChr14g0454031 Helianthus annuus HOM05D007416 ORTHO05D009329 8.7e-23 110.5 94 53.2
Ca_00403_v3 Cicer arietinum L. HOM05D007416 ORTHO05D009329 1.5e-22 109.8 57 80.7
Lalb_Chr20g0121431 Lupinus albus HOM05D007416 ORTHO05D009329 1.9e-22 109.4 57 80.7
TPR.G11747 Trifolium pratense HOM05D007416 ORTHO05D009329 1.9e-22 109.4 63 74.6
TPR.G39540 Trifolium pratense HOM05D007416 ORTHO05D009329 1.9e-22 109.4 63 74.6
C07p16790 Brassica napus HOM05D007416 ORTHO05D009329 3.3e-22 108.6 106 54.7
BraA08t34496Z Brassica rapa HOM05D007416 ORTHO05D009329 4.3e-22 108.2 67 71.6
PGR004G2353 Punica granatum HOM05D007416 ORTHO05D009329 4.3e-22 108.2 61 77.0
HPP92_008637 Vanilla planifolia HOM05D007416 ORTHO05D009329 4.3e-22 108.2 75 61.3
AL1G42170 Arabidopsis lyrata HOM05D007416 ORTHO05D009329 5.7e-22 107.8 64 73.4
VMungo0540G0454 Vigna mungo HOM05D007416 ORTHO05D009329 5.7e-22 107.8 63 74.6
A08p25450 Brassica napus HOM05D007416 ORTHO05D009329 7.4e-22 107.5 61 77.0
CARHR028020 Cardamine hirsuta HOM05D007416 ORTHO05D009329 7.4e-22 107.5 64 73.4
Lj6g0009243 Lotus japonicus HOM05D007416 ORTHO05D009329 7.4e-22 107.5 72 68.1
QL05p043606 Quercus lobata HOM05D007416 ORTHO05D009329 7.4e-22 107.5 93 55.9
AT1G28540 Arabidopsis thaliana HOM05D007416 ORTHO05D009329 9.7e-22 107.1 61 77.0
BraA07t28904Z Brassica rapa HOM05D007416 ORTHO05D009329 9.7e-22 107.1 74 64.9
Phvul.006G180100 Phaseolus vulgaris HOM05D007416 ORTHO05D009329 9.7e-22 107.1 57 80.7
Carub.0001s2700 Capsella rubella HOM05D007416 ORTHO05D009329 1.3e-21 106.7 64 73.4
Thhalv10009143m.g Eutrema salsugineum HOM05D007416 ORTHO05D009329 1.3e-21 106.7 64 71.9
Sp1g24790 Schrenkiella parvula HOM05D007416 ORTHO05D009329 1.3e-21 106.7 64 71.9
Actinidia07614 Actinidia chinensis HOM05D007416 ORTHO05D009329 2.2e-21 105.9 83 59.0
BcaB03g12097 Brassica carinata HOM05D007416 ORTHO05D009329 2.2e-21 105.9 106 52.8
Psat1g201280 Pisum sativum HOM05D007416 ORTHO05D009329 2.2e-21 105.9 82 59.8
BolC3t19794H Brassica oleracea HOM05D007416 ORTHO05D009329 4.8e-21 104.8 98 54.1
BcaC01g00068 Brassica carinata HOM05D007416 ORTHO05D009329 6.3e-21 104.4 96 55.2
Rhsim02G0137800 Rhododendron simsii HOM05D007416 ORTHO05D009329 1.1e-20 103.6 99 51.5
C03p75360 Brassica napus HOM05D007416 ORTHO05D009329 1.4e-20 103.2 102 52.0
Medtr2g014970 Medicago truncatula HOM05D007416 ORTHO05D009329 1.8e-20 102.8 97 53.6
arahy.Tifrunner.gnm1.ann1.46W2M6 Arachis hypogaea HOM05D007416 ORTHO05D009329 2.4e-20 102.4 99 48.5
EL10Ac8g20461 Beta vulgaris HOM05D007416 ORTHO05D009329 2.4e-20 102.4 56 76.8
arahy.Tifrunner.gnm1.ann1.96U62E Arachis hypogaea HOM05D007416 ORTHO05D009329 4.1e-20 101.7 99 48.5
Aa31LG6G11050 Aethionema arabicum HOM05D007416 ORTHO05D009329 6.9e-20 100.9 53 79.2
FAN11G0205 Fragaria x ananassa HOM05D007416 ORTHO05D009329 1.5e-19 99.8 73 64.4
BolC7t42186H Brassica oleracea HOM05D007416 ORTHO05D009329 3.4e-19 98.6 106 52.8
Mapoly0016s0097 Marchantia polymorpha HOM05D007416 ORTHO05D009329 1.0e-18 97.1 92 52.2
AUR62031107 Chenopodium quinoa HOM05D007416 ORTHO05D009329 6.1e-16 87.8 66 54.5
Pp3c24_10110 Physcomitrium patens HOM05D007416 ORTHO05D009329 1.8e-15 86.3 69 56.5
A07p11140 Brassica napus HOM05D007416 ORTHO05D009329 1.7e-13 79.7 50 68.0
AagrBONN_evm.TU.Sc2ySwM_362.2610 Anthoceros agrestis HOM05D007416 ORTHO05D009329 9.1e-12 73.9 57 57.9
Zm00001eb194760 Zea mays HOM05D007416 ORTHO05D009329 3.9e-07 58.5 69 46.4


User provided reference genes

Program Settings