Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1816 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 5.4e-113 411.0 206 100.0
CDE05G0547 Ceratophyllum demersum HOM05D001846 ORTHO05D005785 2.2e-90 335.9 197 87.8
TAR369G0438 Trochodendron aralioides HOM05D001846 ORTHO05D005785 1.0e-26 124.4 190 41.1
Dinv36247 Davidia involucrata HOM05D001846 ORTHO05D005785 3.8e-26 122.5 179 44.7
Actinidia16341 Actinidia chinensis HOM05D001846 ORTHO05D005785 8.6e-26 121.3 185 40.0
MD03G1173500 Malus domestica HOM05D001846 ORTHO05D005785 5.6e-25 118.6 194 37.6
CiPaw.14G118000 Carya illinoinensis HOM05D001846 ORTHO05D005785 9.5e-25 117.9 184 38.0
Lj3g0017471 Lotus japonicus HOM05D001846 ORTHO05D005785 9.5e-25 117.9 191 38.7
Prupe.4G251400 Prunus persica HOM05D001846 ORTHO05D005785 1.2e-24 117.5 188 38.8
FAN11G2083 Fragaria x ananassa HOM05D001846 ORTHO05D005785 2.8e-24 116.3 159 43.4
FvH4_3g28690 Fragaria vesca HOM05D001846 ORTHO05D005785 4.7e-24 115.5 155 40.6
FAN16G0902 Fragaria x ananassa HOM05D001846 ORTHO05D005785 1.0e-23 114.4 195 36.4
Lj3g0008415 Lotus japonicus HOM05D001846 ORTHO05D005785 1.0e-23 114.4 191 37.7
Lj3g0026618 Lotus japonicus HOM05D001846 ORTHO05D005785 1.0e-23 114.4 191 37.7
RcHm_v2.0_Chr5g0052391 Rosa chinensis HOM05D001846 ORTHO05D005785 1.0e-23 114.4 191 38.2
Glyma.12G019500 Glycine max HOM05D001846 ORTHO05D005785 1.8e-23 113.6 189 38.1
Nn7g36246 Nelumbo nucifera HOM05D001846 ORTHO05D005785 2.3e-23 113.2 97 54.6
FAN21G3148 Fragaria x ananassa HOM05D001846 ORTHO05D005785 3.0e-23 112.8 148 41.2
Gorai.013G251400 Gossypium raimondii HOM05D001846 ORTHO05D005785 3.0e-23 112.8 166 36.1
Gohir.D13G220500 Gossypium hirsutum HOM05D001846 ORTHO05D005785 4.0e-23 112.5 166 36.1
Ah.06g194060 Amaranthus hybridus HOM05D001846 ORTHO05D005785 6.8e-23 111.7 192 37.5
Glyma.11G093300 Glycine max HOM05D001846 ORTHO05D005785 8.9e-23 111.3 182 35.7
QL01p004435 Quercus lobata HOM05D001846 ORTHO05D005785 8.9e-23 111.3 190 37.9
Atru.chr3.2697 Acer truncatum HOM05D001846 ORTHO05D005785 1.2e-22 110.9 97 55.7
VMungo1127G1936 Vigna mungo HOM05D001846 ORTHO05D005785 1.5e-22 110.5 189 38.1
CiPaw.13G159200 Carya illinoinensis HOM05D001846 ORTHO05D005785 2.0e-22 110.2 173 37.6
PSO170G6025 Papaver somniferum HOM05D001846 ORTHO05D005785 2.6e-22 109.8 157 39.5
Ciclev10014939m.g Citrus clementina HOM05D001846 ORTHO05D005785 3.4e-22 109.4 189 36.5
Lalb_Chr19g0139851 Lupinus albus HOM05D001846 ORTHO05D005785 4.4e-22 109.0 187 36.4
MD11G1191400 Malus domestica HOM05D001846 ORTHO05D005785 4.4e-22 109.0 112 50.0
FAN25G3740 Fragaria x ananassa HOM05D001846 ORTHO05D005785 7.5e-22 108.2 147 40.1
Eucgr.J00759 Eucalyptus grandis HOM05D001846 ORTHO05D005785 9.8e-22 107.8 179 36.3
Sabra16G0155900 Salix brachista HOM05D001846 ORTHO05D005785 9.8e-22 107.8 184 36.4
Sc16g0011440 Simmondsia chinensis HOM05D001846 ORTHO05D005785 1.7e-21 107.1 173 38.7
Cpa.g.sc84.42 Carica papaya HOM05D001846 ORTHO05D005785 2.9e-21 106.3 156 37.8
Hma1.2p1_1313F.1_g274970 Hydrangea macrophylla HOM05D001846 ORTHO05D005785 2.9e-21 106.3 97 54.6
Phvul.011G021900 Phaseolus vulgaris HOM05D001846 ORTHO05D005785 2.9e-21 106.3 185 35.1
Sabra09G0038200 Salix brachista HOM05D001846 ORTHO05D005785 2.9e-21 106.3 198 34.8
vmacro04149 Vaccinium macrocarpon HOM05D001846 ORTHO05D005785 2.9e-21 106.3 203 33.5
QL01p004534 Quercus lobata HOM05D001846 ORTHO05D005785 3.7e-21 105.9 188 37.8
Hund22024 Selenicereus undatus HOM05D001846 ORTHO05D005785 3.7e-21 105.9 97 51.5
CANSAT54G0460 Cannabis sativa HOM05D001846 ORTHO05D005785 4.9e-21 105.5 177 38.4
Manes.14G003700 Manihot esculenta HOM05D001846 ORTHO05D005785 6.4e-21 105.1 140 38.6
Psat7g170880 Pisum sativum HOM05D001846 ORTHO05D005785 8.3e-21 104.8 193 36.3
Potri.001G256700 Populus trichocarpa HOM05D001846 ORTHO05D005785 1.1e-20 104.4 119 45.4
Potri.009G052400 Populus trichocarpa HOM05D001846 ORTHO05D005785 1.1e-20 104.4 141 39.7
Rhsim13G0220400 Rhododendron simsii HOM05D001846 ORTHO05D005785 2.4e-20 103.2 183 36.6
Lj1A326G19 Lonicera japonica HOM05D001846 ORTHO05D005785 3.2e-20 102.8 185 34.6
Duzib168G1640 Durio zibethinus HOM05D001846 ORTHO05D005785 4.1e-20 102.4 123 44.7
Thecc.09G235700 Theobroma cacao HOM05D001846 ORTHO05D005785 9.2e-20 101.3 173 36.4
Thecc.09G236100 Theobroma cacao HOM05D001846 ORTHO05D005785 9.2e-20 101.3 173 36.4
Medtr4g077160 Medicago truncatula HOM05D001846 ORTHO05D005785 1.2e-19 100.9 193 35.8
THA.LOC104811173 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 1.2e-19 100.9 168 36.9
PSO700G0220 Papaver somniferum HOM05D001846 ORTHO05D005785 4.6e-19 99.0 158 38.6
HanXRQChr13g0401091 Helianthus annuus HOM05D001846 ORTHO05D005785 6.0e-19 98.6 193 32.1
Gohir.D09G110300 Gossypium hirsutum HOM05D001846 ORTHO05D005785 7.8e-19 98.2 174 34.5
MSTRG.21370 Avicennia marina HOM05D001846 ORTHO05D005785 1.3e-18 97.4 97 48.5
PGR119G1478 Punica granatum HOM05D001846 ORTHO05D005785 1.7e-18 97.1 182 34.6
AUR62019315 Chenopodium quinoa HOM05D001846 ORTHO05D005785 1.1e-17 94.4 97 50.5
ECA233G5307 Erigeron canadensis HOM05D001846 ORTHO05D005785 1.1e-17 94.4 207 31.4
Oeu016678.1 Olea europaea HOM05D001846 ORTHO05D005785 1.1e-17 94.4 107 46.7
GSVIVG01025241001 Vitis vinifera HOM05D001846 ORTHO05D005785 1.1e-17 94.4 182 34.1
Ca_18965_v3 Cicer arietinum L. HOM05D001846 ORTHO05D005785 1.5e-17 94.0 99 48.5
Duzib150G0388 Durio zibethinus HOM05D001846 ORTHO05D005785 1.5e-17 94.0 173 37.0
Manes.06G163200 Manihot esculenta HOM05D001846 ORTHO05D005785 1.9e-17 93.6 183 32.8
Dinv22169 Davidia involucrata HOM05D001846 ORTHO05D005785 5.6e-17 92.0 99 46.5
MBI04_g45701_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 5.6e-17 92.0 124 42.7
TWI60G1588 Tripterygium wilfordii HOM05D001846 ORTHO05D005785 5.6e-17 92.0 189 34.9
Cfa009785 Carpinus fangiana HOM05D001846 ORTHO05D005785 9.5e-17 91.3 171 35.1
SGA_v2.0_scaffold8G04581 Striga asiatica HOM05D001846 ORTHO05D005785 9.5e-17 91.3 95 46.3
MSTRG.17597 Avicennia marina HOM05D001846 ORTHO05D005785 1.2e-16 90.9 99 50.5
BolC3t21298H Brassica oleracea HOM05D001846 ORTHO05D005785 1.2e-16 90.9 95 44.2
ATR0332G095 Amborella trichopoda HOM05D001846 ORTHO05D005785 1.6e-16 90.5 168 32.1
Lsat_1_v5_gn_6_25301 Lactuca sativa HOM05D001846 ORTHO05D005785 1.6e-16 90.5 103 40.8
Actinidia06915 Actinidia chinensis HOM05D001846 ORTHO05D005785 2.8e-16 89.7 70 58.6
Gohir.A09G113600 Gossypium hirsutum HOM05D001846 ORTHO05D005785 3.6e-16 89.4 174 32.8
SEGI_01920 Sequoiadendron giganteum HOM05D001846 ORTHO05D005785 4.7e-16 89.0 97 45.4
MSTRG.12465 Avicennia marina HOM05D001846 ORTHO05D005785 6.2e-16 88.6 100 45.0
Migut.D00610 Erythranthe guttata HOM05D001846 ORTHO05D005785 6.2e-16 88.6 100 43.0
Gorai.006G127900 Gossypium raimondii HOM05D001846 ORTHO05D005785 6.2e-16 88.6 174 33.3
MBI04_g43760_MAGBIO Magnolia biondii HOM05D001846 ORTHO05D005785 6.2e-16 88.6 94 51.1
THA.LOC104817913 Tarenaya hassleriana HOM05D001846 ORTHO05D005785 1.1e-15 87.8 171 31.6
BcaC01g01249 Brassica carinata HOM05D001846 ORTHO05D005785 1.4e-15 87.4 89 46.1
C03p89760 Brassica napus HOM05D001846 ORTHO05D005785 1.4e-15 87.4 89 46.1
AUR62000135 Chenopodium quinoa HOM05D001846 ORTHO05D005785 4.0e-15 85.9 61 67.2
Aqoxy2G00165 Aquilegia oxysepala HOM05D001846 ORTHO05D005785 6.8e-15 85.1 168 31.5
COL.COLO4_06126 Corchorus olitorius HOM05D001846 ORTHO05D005785 1.2e-14 84.3 147 35.4
Haze_23151 Corylus avellana HOM05D001846 ORTHO05D005785 1.2e-14 84.3 179 34.6
Sed0016770 Sechium edule HOM05D001846 ORTHO05D005785 1.5e-14 84.0 58 65.5
Actinidia26798 Actinidia chinensis HOM05D001846 ORTHO05D005785 2.0e-14 83.6 66 62.1
Carub.0001s4028 Capsella rubella HOM05D001846 ORTHO05D005785 2.0e-14 83.6 64 60.9
TAR369G0720 Trochodendron aralioides HOM05D001846 ORTHO05D005785 2.0e-14 83.6 150 36.0
CARHR041560 Cardamine hirsuta HOM05D001846 ORTHO05D005785 2.6e-14 83.2 174 33.3
Aa31LG10G3580 Aethionema arabicum HOM05D000089 ORTHO05D005785 3.4e-14 82.8 64 60.9
arahy.Tifrunner.gnm1.ann1.8PYD8T Arachis hypogaea HOM05D001846 ORTHO05D005785 3.4e-14 82.8 165 37.6
BraA06t23456Z Brassica rapa HOM05D001846 ORTHO05D005785 4.4e-14 82.4 117 38.5
MELO3C014586.2 Cucumis melo HOM05D001846 ORTHO05D005785 4.4e-14 82.4 58 65.5
CsaV3_6G039320 Cucumis sativus L. HOM05D001846 ORTHO05D005785 4.4e-14 82.4 58 65.5
SalBow1G1572 Salvia bowleyana HOM05D001846 ORTHO05D005785 4.4e-14 82.4 87 44.8
BcaB07g33587 Brassica carinata HOM05D001846 ORTHO05D005785 7.5e-14 81.6 180 31.7
EL10Ac4g10235 Beta vulgaris HOM05D001846 ORTHO05D005785 9.8e-14 81.3 61 62.3
arahy.Tifrunner.gnm1.ann1.563I02 Arachis hypogaea HOM05D001846 ORTHO05D005785 1.3e-13 80.9 165 36.4
BcaB04g17234 Brassica carinata HOM05D001846 ORTHO05D005785 1.7e-13 80.5 59 62.7
ClCG02G023130 Citrullus lanatus HOM05D001846 ORTHO05D005785 1.7e-13 80.5 164 35.4
Oeu026419.1 Olea europaea HOM05D001846 ORTHO05D005785 1.7e-13 80.5 112 42.9
Peaxi162Scf00004g02629 Petunia axillaris HOM05D001846 ORTHO05D005785 2.2e-13 80.1 59 64.4
AL1G59260 Arabidopsis lyrata HOM05D001846 ORTHO05D005785 2.9e-13 79.7 63 58.7
Os03g0216900 Oryza sativa ssp. japonica HOM05D001846 ORTHO05D005785 2.9e-13 79.7 168 30.4
A06p02500 Brassica napus HOM05D001846 ORTHO05D005785 4.9e-13 79.0 61 60.7
BraA08t32338Z Brassica rapa HOM05D001846 ORTHO05D005785 8.3e-13 78.2 59 61.0
Thhalv10011423m.g Eutrema salsugineum HOM05D001846 ORTHO05D005785 8.3e-13 78.2 181 30.4
BcaC08g43310 Brassica carinata HOM05D001846 ORTHO05D005785 1.1e-12 77.8 61 59.0
C06p06570 Brassica napus HOM05D001846 ORTHO05D005785 1.1e-12 77.8 61 59.0
BolC6t35770H Brassica oleracea HOM05D001846 ORTHO05D005785 1.1e-12 77.8 61 59.0
HanXRQChr02g0051491 Helianthus annuus HOM05D001846 ORTHO05D005785 1.1e-12 77.8 128 34.4
Nitab4.5_0007154g0020 Nicotiana tabacum HOM05D001846 ORTHO05D005785 1.1e-12 77.8 59 64.4
CAN.G71.16 Capsicum annuum HOM05D001846 ORTHO05D005785 1.4e-12 77.4 59 62.7
Sp1g38080 Schrenkiella parvula HOM05D001846 ORTHO05D005785 1.4e-12 77.4 62 58.1
PGSC0003DMG400010305 Solanum tuberosum HOM05D001846 ORTHO05D005785 1.4e-12 77.4 53 67.9
A08p03060 Brassica napus HOM05D001846 ORTHO05D005785 1.9e-12 77.0 58 60.3
AT1G51405 Arabidopsis thaliana HOM05D001846 ORTHO05D005785 2.4e-12 76.6 180 27.8
Nitab4.5_0002741g0070 Nicotiana tabacum HOM05D001846 ORTHO05D005785 2.4e-12 76.6 52 69.2
Solyc11g065630.3 Solanum lycopersicum HOM05D001846 ORTHO05D005785 2.4e-12 76.6 52 69.2
Sopen11g025350 Solanum pennellii HOM05D001846 ORTHO05D005785 2.4e-12 76.6 52 69.2
FAN25G3801 Fragaria x ananassa HOM05D001846 ORTHO05D005785 3.2e-12 76.3 124 34.7
DCAR_023761 Daucus carota HOM05D001846 ORTHO05D005785 5.4e-12 75.5 58 60.3
Cc01_g04530 Coffea canephora HOM05D001846 ORTHO05D005785 9.2e-12 74.7 97 40.2
Zm00001eb400050 Zea mays HOM05D001846 ORTHO05D005785 2.7e-11 73.2 172 30.2
SGA_v2.0_scaffold247G44890 Striga asiatica HOM05D001846 ORTHO05D005785 6.0e-11 72.0 59 54.2
HPP92_007908 Vanilla planifolia HOM05D001846 ORTHO05D005785 3.9e-10 69.3 166 30.1
Zm00001eb008800 Zea mays HOM05D001846 ORTHO05D005785 1.6e-08 63.9 58 51.7
Zm00001eb393780 Zea mays HOM05D001846 ORTHO05D005785 5.8e-06 55.5 174 28.2
Mapoly0001s0089 Marchantia polymorpha HOM05D001846 ORTHO05D005785 7.5e-06 55.1 93 32.3


User provided reference genes

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