Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1799 Ceratophyllum demersum HOM05D006745 ORTHO05D008449 1.4e-107 392.9 193 100.0
HPP92_012950 Vanilla planifolia HOM05D006745 ORTHO05D008449 3.2e-67 258.8 213 62.4
Oeu058205.1 Olea europaea HOM05D006745 ORTHO05D008449 1.6e-66 256.5 210 60.5
Oeu058207.1 Olea europaea HOM05D006745 ORTHO05D008449 1.6e-66 256.5 210 60.5
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 2.7e-66 255.8 158 75.3
Nn6g31942 Nelumbo nucifera HOM05D006745 ORTHO05D008449 4.7e-66 255.0 155 74.8
Migut.N00678 Erythranthe guttata HOM05D006745 ORTHO05D008449 2.3e-65 252.7 217 57.6
Carub.0002s0099 Capsella rubella HOM05D006745 ORTHO05D008449 3.0e-65 252.3 158 72.8
Cc07_g11200 Coffea canephora HOM05D006745 ORTHO05D008449 8.8e-65 250.8 158 73.4
BcaB07g31542 Brassica carinata HOM05D006745 ORTHO05D008449 1.1e-64 250.4 158 73.4
BcaC04g22678 Brassica carinata HOM05D006745 ORTHO05D008449 1.1e-64 250.4 158 73.4
BolC9t54579H Brassica oleracea HOM05D006745 ORTHO05D008449 1.1e-64 250.4 158 73.4
PGR119G0426 Punica granatum HOM05D006745 ORTHO05D008449 1.1e-64 250.4 219 58.4
AL2G11270 Arabidopsis lyrata HOM05D006745 ORTHO05D008449 2.0e-64 249.6 157 72.0
Os02g0120300 Oryza sativa ssp. japonica HOM05D006745 ORTHO05D008449 2.0e-64 249.6 217 57.1
Ciclev10026368m.g Citrus clementina HOM05D006745 ORTHO05D008449 3.3e-64 248.8 217 54.8
RcHm_v2.0_Chr2g0098641 Rosa chinensis HOM05D006745 ORTHO05D008449 3.3e-64 248.8 213 58.7
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 5.7e-64 248.1 229 56.3
ATR0661G256 Amborella trichopoda HOM05D006745 ORTHO05D008449 7.4e-64 247.7 156 71.2
A09p13970 Brassica napus HOM05D006745 ORTHO05D008449 7.4e-64 247.7 158 72.8
Lj2A482T63 Lonicera japonica HOM05D006745 ORTHO05D008449 7.4e-64 247.7 220 57.7
Aqoxy6G02103 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 1.7e-63 246.5 160 71.9
SGA_v2.0_scaffold77G25309 Striga asiatica HOM05D006745 ORTHO05D008449 2.2e-63 246.1 220 55.0
TWI73G1304 Tripterygium wilfordii HOM05D006745 ORTHO05D008449 2.2e-63 246.1 210 59.0
Potri.005G109000 Populus trichocarpa HOM05D006745 ORTHO05D008449 2.8e-63 245.7 213 56.8
Sabra05G0089300 Salix brachista HOM05D006745 ORTHO05D008449 2.8e-63 245.7 159 69.8
CANSAT01G0215 Cannabis sativa HOM05D006745 ORTHO05D008449 3.7e-63 245.4 210 58.1
Aa31LG2G1020 Aethionema arabicum HOM05D006745 ORTHO05D008449 4.8e-63 245.0 159 72.3
FAN19G0356 Fragaria x ananassa HOM05D006745 ORTHO05D008449 8.2e-63 244.2 214 57.0
HanXRQChr16g0531741 Helianthus annuus HOM05D006745 ORTHO05D008449 8.2e-63 244.2 229 54.1
CSS0026839 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 1.4e-62 243.4 160 69.4
Eucgr.I02315 Eucalyptus grandis HOM05D006745 ORTHO05D008449 1.4e-62 243.4 214 57.9
THA.LOC104817830 Tarenaya hassleriana HOM05D006745 ORTHO05D008449 1.4e-62 243.4 157 70.7
QL06p051396 Quercus lobata HOM05D006745 ORTHO05D008449 1.8e-62 243.0 215 56.7
MD15G1238900 Malus domestica HOM05D006745 ORTHO05D008449 2.4e-62 242.7 214 56.1
Rhsim08G0031100 Rhododendron simsii HOM05D006745 ORTHO05D008449 2.4e-62 242.7 158 70.3
Actinidia28725 Actinidia chinensis HOM05D006745 ORTHO05D008449 4.1e-62 241.9 161 68.9
VMungo1215G1582 Vigna mungo HOM05D006745 ORTHO05D008449 4.1e-62 241.9 213 57.7
AUR62003702 Chenopodium quinoa HOM05D006745 ORTHO05D008449 5.3e-62 241.5 216 57.9
Phvul.002G105300 Phaseolus vulgaris HOM05D006745 ORTHO05D008449 5.3e-62 241.5 218 56.0
Lsat_1_v5_gn_3_71521 Lactuca sativa HOM05D006745 ORTHO05D008449 7.0e-62 241.1 154 70.1
Cfa007050 Carpinus fangiana HOM05D006745 ORTHO05D008449 1.2e-61 240.4 214 55.6
Lj2g0007566 Lotus japonicus HOM05D006745 ORTHO05D008449 1.5e-61 240.0 218 55.5
vmacro18434 Vaccinium macrocarpon HOM05D006745 ORTHO05D008449 1.5e-61 240.0 158 69.0
CSS0046970 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 2.0e-61 239.6 160 68.1
GSVIVG01007224001 Vitis vinifera HOM05D006745 ORTHO05D008449 2.6e-61 239.2 216 56.5
AUR62018011 Chenopodium quinoa HOM05D006745 ORTHO05D008449 3.5e-61 238.8 173 66.5
Gohir.A11G041100 Gossypium hirsutum HOM05D006745 ORTHO05D008449 3.5e-61 238.8 214 55.6
Manes.01G150100 Manihot esculenta HOM05D006745 ORTHO05D008449 3.5e-61 238.8 215 55.8
FAN23G2677 Fragaria x ananassa HOM05D006745 ORTHO05D008449 4.5e-61 238.4 214 55.6
Gohir.D11G044400 Gossypium hirsutum HOM05D006745 ORTHO05D008449 4.5e-61 238.4 158 68.4
Gorai.007G047700 Gossypium raimondii HOM05D006745 ORTHO05D008449 4.5e-61 238.4 158 68.4
Medtr5g022860 Medicago truncatula HOM05D006745 ORTHO05D008449 5.9e-61 238.0 157 70.1
Solyc02g061950.4 Solanum lycopersicum HOM05D006745 ORTHO05D008449 7.7e-61 237.7 213 57.3
Sopen02g012910 Solanum pennellii HOM05D006745 ORTHO05D008449 1.0e-60 237.3 156 70.5
arahy.Tifrunner.gnm1.ann1.DU2BQF Arachis hypogaea HOM05D006745 ORTHO05D008449 1.3e-60 236.9 157 70.7
arahy.Tifrunner.gnm1.ann1.EE1FTG Arachis hypogaea HOM05D006745 ORTHO05D008449 1.3e-60 236.9 157 70.7
BcaC04g22675 Brassica carinata HOM05D006745 ORTHO05D008449 1.3e-60 236.9 160 70.0
Glyma.01G163200 Glycine max HOM05D006745 ORTHO05D008449 1.7e-60 236.5 218 55.5
ECA246G0119 Erigeron canadensis HOM05D006745 ORTHO05D008449 2.2e-60 236.1 220 55.0
FAN26G1827 Fragaria x ananassa HOM05D006745 ORTHO05D008449 2.2e-60 236.1 215 55.3
Sc22g0002270 Simmondsia chinensis HOM05D006745 ORTHO05D008449 2.9e-60 235.7 160 67.5
TPR.G25110 Trifolium pratense HOM05D006745 ORTHO05D008449 6.5e-60 234.6 157 69.4
PGSC0003DMG401023885 Solanum tuberosum HOM05D006745 ORTHO05D008449 8.5e-60 234.2 213 55.9
MELO3C007934.2 Cucumis melo HOM05D006745 ORTHO05D008449 1.1e-59 233.8 155 67.7
Zm00001eb229980 Zea mays HOM05D006745 ORTHO05D008449 1.5e-59 233.4 159 67.3
EL10Ac6g15168 Beta vulgaris HOM05D006745 ORTHO05D008449 1.9e-59 233.0 215 56.3
CsaV3_6G047410 Cucumis sativus L. HOM05D006745 ORTHO05D008449 1.9e-59 233.0 155 67.7
CAN.G576.2 Capsicum annuum HOM05D006745 ORTHO05D008449 5.5e-59 231.5 156 68.6
Psat2g152400 Pisum sativum HOM05D006745 ORTHO05D008449 5.5e-59 231.5 157 68.2
Ca_24936_v3 Cicer arietinum L. HOM05D006745 ORTHO05D008449 9.4e-59 230.7 157 68.2
Sed0008453 Sechium edule HOM05D006745 ORTHO05D008449 2.7e-58 229.2 155 65.8
Ah.02g123330 Amaranthus hybridus HOM05D006745 ORTHO05D008449 6.1e-58 228.0 217 56.2
DCAR_023133 Daucus carota HOM05D006745 ORTHO05D008449 6.1e-58 228.0 154 68.8
Prupe.7G173600 Prunus persica HOM05D006745 ORTHO05D008449 1.4e-57 226.9 214 56.1
CARHR047310 Cardamine hirsuta HOM05D006745 ORTHO05D008449 2.3e-57 226.1 149 71.1
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 3.9e-57 225.3 197 56.9
Lalb_Chr09g0321491 Lupinus albus HOM05D006745 ORTHO05D008449 8.8e-57 224.2 206 55.3
Nitab4.5_0000188g0160 Nicotiana tabacum HOM05D006745 ORTHO05D008449 2.0e-56 223.0 186 60.2
unitig_60.g25574 Utricularia gibba HOM05D006745 ORTHO05D008449 8.5e-52 207.6 199 51.3
CiPaw.07G062000 Carya illinoinensis HOM05D006745 ORTHO05D008449 1.1e-51 207.2 214 50.5
Thecc.01G012900 Theobroma cacao HOM05D006745 ORTHO05D008449 1.1e-51 207.2 216 50.9
Aqoxy278s001 Aquilegia oxysepala HOM05D006745 ORTHO05D008449 1.9e-51 206.5 162 67.3
CARHR047280 Cardamine hirsuta HOM05D006745 ORTHO05D008449 9.4e-51 204.1 126 71.4
Duzib147G0156 Durio zibethinus HOM05D006745 ORTHO05D008449 1.6e-50 203.4 155 62.6
ClCG01G020530 Citrullus lanatus HOM05D006745 ORTHO05D008449 8.0e-50 201.1 172 57.6
Pp3c3_3170 Physcomitrium patens HOM05D006745 ORTHO05D008449 4.8e-47 191.8 155 57.4
SMO340G0117 Selaginella moellendorffii HOM05D006745 ORTHO05D008449 8.3e-47 191.0 153 60.1
Sed0011409 Sechium edule HOM05D006745 ORTHO05D008449 5.3e-46 188.3 186 52.2
arahy.Tifrunner.gnm1.ann1.N8WRPV Arachis hypogaea HOM05D006745 ORTHO05D008449 1.2e-45 187.2 130 66.2
Sp2g00830 Schrenkiella parvula HOM05D006745 ORTHO05D008449 2.0e-45 186.4 158 56.3
Mapoly0041s0084 Marchantia polymorpha HOM05D006745 ORTHO05D008449 2.7e-45 186.0 156 55.1
AT1G63855 Arabidopsis thaliana HOM05D006745 ORTHO05D008449 3.5e-45 185.7 157 58.0
Thhalv10023706m.g Eutrema salsugineum HOM05D006745 ORTHO05D008449 2.9e-44 182.6 159 56.6
SalBow3G1250 Salvia bowleyana HOM05D006745 ORTHO05D008449 5.0e-44 181.8 206 47.1
Atru.chr3.895 Acer truncatum HOM05D006745 ORTHO05D008449 8.5e-44 181.0 214 48.1
Peaxi162Scf00439g00049 Petunia axillaris HOM05D006745 ORTHO05D008449 4.7e-42 175.3 204 47.1
Atru.chr3.884 Acer truncatum HOM05D006745 ORTHO05D008449 6.1e-42 174.9 158 55.7
FvH4_1g11230 Fragaria vesca HOM05D006745 ORTHO05D008449 6.8e-41 171.4 165 53.9
Pp3c3_3178 Physcomitrium patens HOM05D006745 ORTHO05D008449 2.0e-37 159.8 155 52.9
Medtr3g096570 Medicago truncatula HOM05D006745 ORTHO05D008449 3.8e-36 155.6 115 64.3
Medtr3g096562 Medicago truncatula HOM05D006745 ORTHO05D008449 1.6e-34 150.2 116 62.9
FAN28G2493 Fragaria x ananassa HOM05D006745 ORTHO05D008449 1.0e-33 147.5 237 38.8
CSS0012608 Camellia sinensis var. sinensis HOM05D006745 ORTHO05D008449 3.0e-33 146.0 161 50.3
Nitab4.5_0002337g0130 Nicotiana tabacum HOM05D006745 ORTHO05D008449 4.0e-33 145.6 138 54.3
Glyma.02G164500 Glycine max HOM05D006745 ORTHO05D008449 8.9e-33 144.4 175 47.4
Hund14069 Selenicereus undatus HOM05D006745 ORTHO05D008449 1.8e-30 136.7 109 60.6
Cpa.g.sc29.52 Carica papaya HOM05D006745 ORTHO05D008449 1.2e-26 124.0 134 48.5
Medtr2g078490 Medicago truncatula HOM05D006745 ORTHO05D008449 5.6e-19 98.6 108 47.2
Rhsim01G0268300 Rhododendron simsii HOM05D006745 ORTHO05D008449 8.9e-17 91.3 65 60.0
BraA09t37044Z Brassica rapa HOM05D006745 ORTHO05D008449 3.5e-13 79.3 50 74.0
COL.COLO4_22483 Corchorus olitorius HOM05D006745 ORTHO05D008449 3.5e-13 79.3 50 66.0
MSTRG.17961 Avicennia marina HOM05D006745 ORTHO05D008449 6.6e-12 75.1 102 43.1
BolC4t24505H Brassica oleracea HOM05D006745 ORTHO05D008449 8.6e-12 74.7 66 60.6
COL.COLO4_12119 Corchorus olitorius HOM05D001552 ORTHO05D003294 8.4e-07 58.2 97 38.1
Haze_18406 Corylus avellana HOM05D000219 ORTHO05D000226 8.4e-07 58.2 108 34.3
DCAR_005441 Daucus carota HOM05D001602 ORTHO05D001470 8.4e-07 58.2 93 34.4
SEGI_27117 Sequoiadendron giganteum HOM05D001602 ORTHO05D001470 8.4e-07 58.2 102 39.2
AT3G50850 Arabidopsis thaliana HOM05D005677 ORTHO05D006966 1.4e-06 57.4 131 31.3
HPP92_021095 Vanilla planifolia HOM05D001602 ORTHO05D001470 1.4e-06 57.4 108 36.1
HPP92_017205 Vanilla planifolia HOM05D002553 ORTHO05D002767 1.9e-06 57.0 104 33.7
AagrBONN_evm.TU.Sc2ySwM_362.258 Anthoceros agrestis HOM05D001602 ORTHO05D001470 3.2e-06 56.2 104 35.6
Eucgr.K02332 Eucalyptus grandis HOM05D001602 ORTHO05D001470 4.1e-06 55.8 123 31.7
FAN04G0471 Fragaria x ananassa HOM05D001602 ORTHO05D001470 4.1e-06 55.8 107 33.6
MD06G1241200 Malus domestica HOM05D001602 ORTHO05D001470 4.1e-06 55.8 97 33.0
Mapoly0059s0066 Marchantia polymorpha HOM05D001602 ORTHO05D001470 4.1e-06 55.8 113 34.5
TPR.G31348 Trifolium pratense HOM05D001602 ORTHO05D001470 4.1e-06 55.8 124 31.5
Lsat_1_v5_gn_3_109781 Lactuca sativa HOM05D001602 ORTHO05D001470 5.4e-06 55.5 122 32.8
GSVIVG01024244001 Vitis vinifera HOM05D001602 ORTHO05D001470 5.4e-06 55.5 123 32.5
Carub.0005s1724 Capsella rubella HOM05D005677 ORTHO05D006966 7.1e-06 55.1 123 29.3
Ca_25281_v3 Cicer arietinum L. HOM05D001602 ORTHO05D001470 7.1e-06 55.1 98 34.7
HanXRQChr03g0089261 Helianthus annuus HOM05D001602 ORTHO05D001470 7.1e-06 55.1 93 35.5
Hma1.2p1_0224F.1_g094650 Hydrangea macrophylla HOM05D005677 ORTHO05D006966 7.1e-06 55.1 112 34.8
Aa31LG1G15100 Aethionema arabicum HOM05D005677 ORTHO05D006966 9.2e-06 54.7 150 28.7


User provided reference genes

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