Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1781 Ceratophyllum demersum HOM05D001663 ORTHO05D005717 5.7e-68 260.8 129 100.0
Manes.18G101600 Manihot esculenta HOM05D001663 ORTHO05D005717 6.1e-22 107.8 90 58.9
Nn5g28968 Nelumbo nucifera HOM05D001663 ORTHO05D005717 5.2e-21 104.8 94 57.4
Prupe.1G508500 Prunus persica HOM05D001663 ORTHO05D005717 8.9e-21 104.0 91 57.1
PGR042G1550 Punica granatum HOM05D001663 ORTHO05D005717 8.9e-21 104.0 91 57.1
vmacro04774 Vaccinium macrocarpon HOM05D001663 ORTHO05D005717 1.2e-20 103.6 91 57.1
Sabra02G0071900 Salix brachista HOM05D001663 ORTHO05D005717 2.6e-20 102.4 90 55.6
Dinv44724 Davidia involucrata HOM05D001663 ORTHO05D005717 3.4e-20 102.1 90 56.7
FAN13G3230 Fragaria x ananassa HOM05D001663 ORTHO05D005717 4.4e-20 101.7 124 48.4
Nitab4.5_0004952g0050 Nicotiana tabacum HOM05D001663 ORTHO05D005717 4.4e-20 101.7 90 56.7
FAN08G2783 Fragaria x ananassa HOM05D001663 ORTHO05D005717 5.7e-20 101.3 124 47.6
Nitab4.5_0001915g0140 Nicotiana tabacum HOM05D001663 ORTHO05D005717 5.7e-20 101.3 90 56.7
Psat2g076640 Pisum sativum HOM05D001663 ORTHO05D005717 5.7e-20 101.3 90 52.2
arahy.Tifrunner.gnm1.ann1.7M6WCL Arachis hypogaea HOM05D001663 ORTHO05D005717 7.5e-20 100.9 90 55.6
arahy.Tifrunner.gnm1.ann1.ZLN6KV Arachis hypogaea HOM05D001663 ORTHO05D005717 7.5e-20 100.9 90 55.6
FAN18G1299 Fragaria x ananassa HOM05D001663 ORTHO05D005717 7.5e-20 100.9 97 51.5
Lj1g0004140 Lotus japonicus HOM05D001663 ORTHO05D005717 7.5e-20 100.9 90 56.7
Phvul.008G169200 Phaseolus vulgaris HOM05D001663 ORTHO05D005717 7.5e-20 100.9 90 56.7
Glyma.14G167200 Glycine max HOM05D001663 ORTHO05D005717 9.8e-20 100.5 90 56.7
Rhsim07G0199300 Rhododendron simsii HOM05D001663 ORTHO05D005717 9.8e-20 100.5 91 54.9
TWI12G1423 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 1.3e-19 100.1 89 56.2
FAN04G0194 Fragaria x ananassa HOM05D001663 ORTHO05D005717 1.7e-19 99.8 124 47.6
Ca_26536_v3 Cicer arietinum L. HOM05D001663 ORTHO05D005717 2.2e-19 99.4 90 54.4
Lalb_Chr10g0102081 Lupinus albus HOM05D001663 ORTHO05D005717 2.2e-19 99.4 90 56.7
MD15G1361100 Malus domestica HOM05D001663 ORTHO05D005717 2.2e-19 99.4 87 57.5
Peaxi162Scf00756g00434 Petunia axillaris HOM05D001663 ORTHO05D005717 2.2e-19 99.4 90 53.3
FvH4_5g38340 Fragaria vesca HOM05D001663 ORTHO05D005717 2.9e-19 99.0 91 53.8
MBI02_g34271_MAGBIO Magnolia biondii HOM05D001663 ORTHO05D005717 2.9e-19 99.0 90 54.4
TWI56G1202 Tripterygium wilfordii HOM05D001663 ORTHO05D005717 2.9e-19 99.0 89 56.2
Ciclev10001001m.g Citrus clementina HOM05D001663 ORTHO05D005717 3.7e-19 98.6 90 56.7
Dinv13062 Davidia involucrata HOM05D001663 ORTHO05D005717 3.7e-19 98.6 90 55.6
ECA246G3782 Erigeron canadensis HOM05D001663 ORTHO05D005717 4.9e-19 98.2 89 55.1
RhsimUnG0073000 Rhododendron simsii HOM05D001663 ORTHO05D005717 4.9e-19 98.2 91 53.8
VMungo0647G1200 Vigna mungo HOM05D001663 ORTHO05D005717 6.4e-19 97.8 90 53.3
Sc18g0007560 Simmondsia chinensis HOM05D001663 ORTHO05D005717 8.3e-19 97.4 91 51.6
TPR.G30426 Trifolium pratense HOM05D001663 ORTHO05D005717 8.3e-19 97.4 90 54.4
TAR376G0684 Trochodendron aralioides HOM05D001663 ORTHO05D005717 8.3e-19 97.4 91 53.8
MD08G1174500 Malus domestica HOM05D001663 ORTHO05D005717 1.1e-18 97.1 87 55.2
Cpa.g.sc1782.1 Carica papaya HOM05D001663 ORTHO05D005717 1.4e-18 96.7 90 51.1
HanXRQChr05g0162261 Helianthus annuus HOM05D001663 ORTHO05D005717 1.4e-18 96.7 89 52.8
Lj6A263G20 Lonicera japonica HOM05D001663 ORTHO05D005717 1.8e-18 96.3 90 53.3
CSS0006833 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 4.1e-18 95.1 91 52.7
Medtr5g061040 Medicago truncatula HOM05D001663 ORTHO05D005717 4.1e-18 95.1 90 51.1
PSO210G6007 Papaver somniferum HOM05D001663 ORTHO05D005717 4.1e-18 95.1 96 53.1
Aa31LG9G14450 Aethionema arabicum HOM05D001663 ORTHO05D005717 5.4e-18 94.7 90 54.4
EL10Ac8g18308 Beta vulgaris HOM05D001663 ORTHO05D005717 7.0e-18 94.4 91 49.5
CSS0003227 Camellia sinensis var. sinensis HOM05D001663 ORTHO05D005717 9.2e-18 94.0 88 53.4
Hma1.2p1_0529F.1_g173150 Hydrangea macrophylla HOM05D001663 ORTHO05D005717 9.2e-18 94.0 91 49.5
Potri.002G090900 Populus trichocarpa HOM05D001663 ORTHO05D005717 9.2e-18 94.0 81 56.8
PSO447G0047 Papaver somniferum HOM05D001663 ORTHO05D005717 1.2e-17 93.6 96 52.1
Cc10_g06030 Coffea canephora HOM05D001663 ORTHO05D005717 1.6e-17 93.2 95 47.4
AUR62021323 Chenopodium quinoa HOM05D001663 ORTHO05D005717 2.0e-17 92.8 91 48.4
Duzib041G0602 Durio zibethinus HOM05D001663 ORTHO05D005717 2.0e-17 92.8 91 51.6
Lalb_Chr04g0253241 Lupinus albus HOM05D001663 ORTHO05D005717 2.0e-17 92.8 90 53.3
Nn1g05239 Nelumbo nucifera HOM05D001663 ORTHO05D005717 2.0e-17 92.8 94 53.2
GSVIVG01008963001 Vitis vinifera HOM05D001663 ORTHO05D005717 2.7e-17 92.4 90 53.3
QL12p035556 Quercus lobata HOM05D001663 ORTHO05D005717 3.5e-17 92.0 88 50.0
SalBow7G1241 Salvia bowleyana HOM05D001663 ORTHO05D005717 3.5e-17 92.0 88 50.0
THA.LOC104813136 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 3.5e-17 92.0 88 48.9
CANSAT25G1457 Cannabis sativa HOM05D001663 ORTHO05D005717 4.6e-17 91.7 90 47.8
DCAR_003554 Daucus carota HOM05D001663 ORTHO05D005717 4.6e-17 91.7 93 48.4
CAN.G617.5 Capsicum annuum HOM05D001663 ORTHO05D005717 7.8e-17 90.9 90 52.2
Glyma.13G085400 Glycine max HOM05D001663 ORTHO05D005717 7.8e-17 90.9 78 57.7
Aqoxy3G00244 Aquilegia oxysepala HOM05D001663 ORTHO05D005717 1.3e-16 90.1 90 48.9
Eucgr.H00930 Eucalyptus grandis HOM05D001663 ORTHO05D005717 1.3e-16 90.1 90 51.1
Solyc04g072440.4 Solanum lycopersicum HOM05D001663 ORTHO05D005717 1.3e-16 90.1 90 50.0
Sopen04g028600 Solanum pennellii HOM05D001663 ORTHO05D005717 1.3e-16 90.1 90 50.0
Actinidia29571 Actinidia chinensis HOM05D001663 ORTHO05D005717 1.7e-16 89.7 83 54.2
Ah.09g230050 Amaranthus hybridus HOM05D001663 ORTHO05D005717 1.7e-16 89.7 81 51.9
THA.LOC104816946 Tarenaya hassleriana HOM05D001663 ORTHO05D005717 1.7e-16 89.7 77 58.4
Cfa015941 Carpinus fangiana HOM05D001663 ORTHO05D005717 2.3e-16 89.4 112 47.3
CiPaw.05G231300 Carya illinoinensis HOM05D001663 ORTHO05D005717 2.3e-16 89.4 91 48.4
Thhalv10028627m.g Eutrema salsugineum HOM05D001663 ORTHO05D005717 2.3e-16 89.4 90 50.0
PGSC0003DMG400027563 Solanum tuberosum HOM05D001663 ORTHO05D005717 2.3e-16 89.4 90 50.0
CARHR259570 Cardamine hirsuta HOM05D001663 ORTHO05D005717 3.0e-16 89.0 90 51.1
Thecc.08G114700 Theobroma cacao HOM05D001663 ORTHO05D005717 3.0e-16 89.0 91 51.6
BcaB01g01352 Brassica carinata HOM05D001663 ORTHO05D005717 3.9e-16 88.6 90 52.2
BcaC04g20910 Brassica carinata HOM05D001663 ORTHO05D005717 3.9e-16 88.6 90 51.1
C09p38040 Brassica napus HOM05D001663 ORTHO05D005717 3.9e-16 88.6 90 51.1
BolC9t56640H Brassica oleracea HOM05D001663 ORTHO05D005717 3.9e-16 88.6 90 51.1
A09p30170 Brassica napus HOM05D001663 ORTHO05D005717 5.0e-16 88.2 90 50.0
BraA09t38581Z Brassica rapa HOM05D001663 ORTHO05D005717 5.0e-16 88.2 90 50.0
Sp6g09330 Schrenkiella parvula HOM05D001663 ORTHO05D005717 5.0e-16 88.2 90 51.1
Atru.chr13.1295 Acer truncatum HOM05D001663 ORTHO05D005717 6.6e-16 87.8 90 52.2
Haze_00550 Corylus avellana HOM05D001663 ORTHO05D005717 6.6e-16 87.8 91 50.5
HPP92_009232 Vanilla planifolia HOM05D001663 ORTHO05D005717 1.9e-15 86.3 90 47.8
ATR0564G349 Amborella trichopoda HOM05D001663 ORTHO05D005717 2.5e-15 85.9 89 49.4
AT4G08540 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 2.5e-15 85.9 90 47.8
Migut.C00211 Erythranthe guttata HOM05D001663 ORTHO05D005717 2.5e-15 85.9 88 48.9
MSTRG.24955 Avicennia marina HOM05D001663 ORTHO05D005717 3.3e-15 85.5 87 52.9
Actinidia33165 Actinidia chinensis HOM05D001663 ORTHO05D005717 4.3e-15 85.1 91 49.5
MSTRG.947 Avicennia marina HOM05D001663 ORTHO05D005717 4.3e-15 85.1 83 51.8
COL.COLO4_16510 Corchorus olitorius HOM05D001663 ORTHO05D005717 7.3e-15 84.3 91 49.5
Carub.0006s2708 Capsella rubella HOM05D001663 ORTHO05D005717 1.2e-14 83.6 90 51.1
SGA_v2.0_scaffold48G18009 Striga asiatica HOM05D001663 ORTHO05D005717 1.2e-14 83.6 88 47.7
Gohir.D02G082500 Gossypium hirsutum HOM05D001663 ORTHO05D005717 2.1e-14 82.8 91 50.5
Gorai.005G092500 Gossypium raimondii HOM05D001663 ORTHO05D005717 2.1e-14 82.8 91 50.5
AL6G42350 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 2.8e-14 82.4 90 46.7
Gohir.A02G075400 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.4e-13 80.1 91 49.5
MELO3C008130.2 Cucumis melo HOM05D001663 ORTHO05D005717 2.3e-13 79.3 78 48.7
CsaV3_2G033570 Cucumis sativus L. HOM05D001663 ORTHO05D005717 2.3e-13 79.3 78 48.7
ClCG11G008030 Citrullus lanatus HOM05D001663 ORTHO05D005717 5.2e-13 78.2 77 46.8
Gohir.D05G269900 Gossypium hirsutum HOM05D001663 ORTHO05D005717 1.2e-12 77.0 90 46.7
Gorai.009G282600 Gossypium raimondii HOM05D001663 ORTHO05D005717 1.2e-12 77.0 90 46.7
Duzib093G0504 Durio zibethinus HOM05D001663 ORTHO05D005717 3.4e-12 75.5 91 47.3
Sed0003415 Sechium edule HOM05D001663 ORTHO05D005717 4.4e-12 75.1 76 47.4
unitig_747.g21547 Utricularia gibba HOM05D001663 ORTHO05D005717 3.7e-11 72.0 88 43.2
AL2G38170 Arabidopsis lyrata HOM05D001663 ORTHO05D005717 7.0e-10 67.8 89 44.9
Pp3c5_11170 Physcomitrium patens HOM05D001663 ORTHO05D005717 1.2e-09 67.0 90 41.1
AT1G77890 Arabidopsis thaliana HOM05D001663 ORTHO05D005717 3.5e-09 65.5 86 41.9
Carub.0002s2479 Capsella rubella HOM05D001663 ORTHO05D005717 4.6e-09 65.1 86 44.2
A07p43160 Brassica napus HOM05D001663 ORTHO05D005717 1.9e-07 59.7 86 40.7
BcaC08g47627 Brassica carinata HOM05D001663 ORTHO05D005717 2.5e-07 59.3 86 40.7
C06p51850 Brassica napus HOM05D001663 ORTHO05D005717 2.5e-07 59.3 86 40.7
BolC6t40206H Brassica oleracea HOM05D001663 ORTHO05D005717 2.5e-07 59.3 86 40.7
BraA07t31838Z Brassica rapa HOM05D001663 ORTHO05D005717 2.5e-07 59.3 86 40.7
Sp5g33060 Schrenkiella parvula HOM05D001663 ORTHO05D005717 2.5e-07 59.3 75 44.0
BcaB03g15913 Brassica carinata HOM05D001663 ORTHO05D005717 4.3e-07 58.5 86 41.9
CARHR071380 Cardamine hirsuta HOM05D001663 ORTHO05D005717 7.3e-07 57.8 86 38.4
Zm00001eb109770 Zea mays HOM05D001663 ORTHO05D005717 1.2e-06 57.0 84 36.9


User provided reference genes

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