Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1743 Ceratophyllum demersum HOM05D005402 ORTHO05D007036 1.4e-43 179.1 86 100.0
CDE05G1008 Ceratophyllum demersum HOM05D005402 ORTHO05D007036 1.2e-21 106.3 66 77.3
Nn1g07183 Nelumbo nucifera HOM05D005402 ORTHO05D007036 9.5e-11 70.1 48 68.8
TAR629G0778 Trochodendron aralioides HOM05D005402 ORTHO05D007036 4.7e-10 67.8 50 62.0
ATR0743G102 Amborella trichopoda HOM05D005402 ORTHO05D007036 2.0e-08 62.4 60 48.3
MBI02_g15380_MAGBIO Magnolia biondii HOM05D005402 ORTHO05D007036 2.0e-08 62.4 50 56.0
BcaB03g12558 Brassica carinata HOM05D005402 ORTHO05D007036 2.6e-08 62.0 61 49.2
Zm00001eb118290 Zea mays HOM05D005402 ORTHO05D007036 2.6e-08 62.0 53 54.7
Thecc.06G223300 Theobroma cacao HOM05D005402 ORTHO05D007036 3.4e-08 61.6 47 55.3
CANSAT56G4097 Cannabis sativa HOM05D005402 ORTHO05D007036 4.4e-08 61.2 54 51.9
Ciclev10014465m.g Citrus clementina HOM05D005402 ORTHO05D007036 5.7e-08 60.8 75 40.0
Gorai.009G179800 Gossypium raimondii HOM05D005402 ORTHO05D007036 5.7e-08 60.8 47 57.4
Aqoxy1G03121 Aquilegia oxysepala HOM05D005402 ORTHO05D007036 7.5e-08 60.5 50 54.0
C08p10670 Brassica napus HOM05D005402 ORTHO05D007036 7.5e-08 60.5 56 53.6
A08p20200 Brassica napus HOM05D005402 ORTHO05D007036 9.8e-08 60.1 67 46.3
BraA08t33979Z Brassica rapa HOM05D005402 ORTHO05D007036 9.8e-08 60.1 67 46.3
Haze_06819 Corylus avellana HOM05D005402 ORTHO05D007036 9.8e-08 60.1 47 57.4
Dinv13911 Davidia involucrata HOM05D005402 ORTHO05D007036 9.8e-08 60.1 47 57.4
Gohir.A05G171400 Gossypium hirsutum HOM05D005402 ORTHO05D007036 9.8e-08 60.1 47 57.4
Gohir.D05G174500 Gossypium hirsutum HOM05D005402 ORTHO05D007036 9.8e-08 60.1 47 57.4
Atru.chr10.2252 Acer truncatum HOM05D005402 ORTHO05D007036 1.3e-07 59.7 54 53.7
Cfa000204 Carpinus fangiana HOM05D005402 ORTHO05D007036 1.3e-07 59.7 47 57.4
Lsat_1_v5_gn_7_16460 Lactuca sativa HOM05D005402 ORTHO05D007036 1.3e-07 59.7 50 56.0
BcaC07g38316 Brassica carinata HOM05D005402 ORTHO05D007036 2.2e-07 58.9 56 51.8
BolC8t48740H Brassica oleracea HOM05D005402 ORTHO05D007036 2.2e-07 58.9 56 51.8
Duzib235G0987 Durio zibethinus HOM05D005402 ORTHO05D007036 2.8e-07 58.5 47 55.3
Manes.16G005300 Manihot esculenta HOM05D005402 ORTHO05D007036 4.9e-07 57.8 51 45.1
GSVIVG01012705001 Vitis vinifera HOM05D005402 ORTHO05D007036 4.9e-07 57.8 47 57.4
CiPaw.09G093500 Carya illinoinensis HOM05D005402 ORTHO05D007036 6.3e-07 57.4 50 50.0
Sp7g26160 Schrenkiella parvula HOM05D005402 ORTHO05D007036 6.3e-07 57.4 64 43.8
COL.COLO4_31795 Corchorus olitorius HOM05D005402 ORTHO05D007036 1.1e-06 56.6 47 51.1
Dinv20063 Davidia involucrata HOM05D005402 ORTHO05D007036 1.1e-06 56.6 47 55.3
Hma1.2p1_0412F.1_g147300 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 1.1e-06 56.6 47 55.3
Hma1.2p1_0412F.1_g147310 Hydrangea macrophylla HOM05D005402 ORTHO05D007036 1.1e-06 56.6 47 55.3
AL7G24400 Arabidopsis lyrata HOM05D005402 ORTHO05D007036 1.4e-06 56.2 64 42.2
PGR004G0080 Punica granatum HOM05D005402 ORTHO05D007036 1.4e-06 56.2 75 41.3
vmacro15795 Vaccinium macrocarpon HOM05D005402 ORTHO05D007036 1.4e-06 56.2 66 40.9
Sabra07G0036200 Salix brachista HOM05D005402 ORTHO05D007036 1.8e-06 55.8 46 56.5
Nitab4.5_0000005g0240 Nicotiana tabacum HOM05D005402 ORTHO05D007036 2.4e-06 55.5 47 53.2
Solyc02g032920.3 Solanum lycopersicum HOM05D005402 ORTHO05D007036 2.4e-06 55.5 47 53.2
Sopen02g011290 Solanum pennellii HOM05D005402 ORTHO05D007036 2.4e-06 55.5 47 53.2
PGSC0003DMG400022060 Solanum tuberosum HOM05D005402 ORTHO05D007036 2.4e-06 55.5 47 53.2
ClCG01G021860 Citrullus lanatus HOM05D005402 ORTHO05D007036 3.1e-06 55.1 63 42.9
CARHR235910 Cardamine hirsuta HOM05D005402 ORTHO05D007036 4.1e-06 54.7 64 42.2
Migut.M01334 Erythranthe guttata HOM05D005402 ORTHO05D007036 4.1e-06 54.7 50 48.0
QL05p072729 Quercus lobata HOM05D005402 ORTHO05D007036 4.1e-06 54.7 47 55.3
ECA236G3723 Erigeron canadensis HOM05D005402 ORTHO05D000490 5.4e-06 54.3 64 42.2
Prupe.4G224400 Prunus persica HOM05D005402 ORTHO05D007036 5.4e-06 54.3 56 42.9
MSTRG.7199 Avicennia marina HOM05D005402 ORTHO05D007036 7.0e-06 53.9 54 46.3
Cpa.g.sc1199.5 Carica papaya HOM05D005402 ORTHO05D007036 7.0e-06 53.9 46 52.2
Nitab4.5_0004712g0050 Nicotiana tabacum HOM05D005402 ORTHO05D007036 7.0e-06 53.9 47 51.1
CSS0005702 Camellia sinensis var. sinensis HOM05D005402 ORTHO05D007036 9.2e-06 53.5 45 55.6


User provided reference genes

Program Settings