Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 8.4e-97 357.1 187 100.0
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 2.0e-29 133.3 148 55.4
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 5.8e-29 131.7 148 54.7
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 2.9e-28 129.4 149 53.7
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.4e-27 127.1 149 52.3
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 1.4e-27 127.1 149 51.0
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 1.9e-27 126.7 149 51.7
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 1.2e-26 124.0 148 48.6
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 2.7e-26 122.9 148 50.7
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 2.7e-26 122.9 148 52.0
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 3.5e-26 122.5 141 53.2
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 4.6e-26 122.1 151 49.7
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 4.6e-26 122.1 151 49.7
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 6.0e-26 121.7 148 49.3
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 7.8e-26 121.3 148 50.7
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 7.8e-26 121.3 149 51.7
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 1.0e-25 120.9 150 48.7
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 1.0e-25 120.9 149 51.0
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 1.3e-25 120.6 148 48.6
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 1.3e-25 120.6 148 48.0
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 1.3e-25 120.6 148 50.0
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 1.7e-25 120.2 149 50.3
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 2.3e-25 119.8 141 52.5
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 2.3e-25 119.8 149 47.7
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 3.0e-25 119.4 148 48.0
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 3.9e-25 119.0 148 48.6
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 5.0e-25 118.6 148 48.6
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 5.0e-25 118.6 148 48.6
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 6.6e-25 118.2 148 49.3
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 8.6e-25 117.9 148 48.0
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 8.6e-25 117.9 149 48.3
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 8.6e-25 117.9 150 49.3
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 1.1e-24 117.5 148 46.6
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 1.5e-24 117.1 149 49.7
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 1.5e-24 117.1 153 47.7
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 1.9e-24 116.7 149 49.0
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 1.9e-24 116.7 149 48.3
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 1.9e-24 116.7 148 49.3
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 1.9e-24 116.7 149 47.7
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 1.9e-24 116.7 150 49.3
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 1.9e-24 116.7 148 48.0
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.9e-24 116.7 149 51.0
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 1.9e-24 116.7 149 49.7
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 2.5e-24 116.3 149 49.0
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 4.3e-24 115.5 148 45.3
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 4.3e-24 115.5 149 46.3
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 4.3e-24 115.5 148 45.3
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 5.6e-24 115.2 149 48.3
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 5.6e-24 115.2 148 48.6
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 7.3e-24 114.8 172 44.2
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 7.3e-24 114.8 149 45.6
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 7.3e-24 114.8 173 43.9
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 9.5e-24 114.4 148 45.9
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 9.5e-24 114.4 148 47.3
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 1.2e-23 114.0 149 47.7
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 1.2e-23 114.0 149 46.3
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 2.1e-23 113.2 145 46.2
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 2.1e-23 113.2 149 47.7
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.1e-23 113.2 149 47.7
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 2.8e-23 112.8 149 47.0
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 3.6e-23 112.5 173 43.4
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 6.2e-23 111.7 149 47.0
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 6.2e-23 111.7 150 46.0
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 1.1e-22 110.9 148 48.0
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 2.3e-22 109.8 153 47.1
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 3.1e-22 109.4 149 45.0
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 3.1e-22 109.4 187 41.7
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 4.0e-22 109.0 150 48.7
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 5.2e-22 108.6 149 46.3
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 5.2e-22 108.6 149 47.7
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 5.2e-22 108.6 150 47.3
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 5.2e-22 108.6 148 47.3
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 5.2e-22 108.6 141 46.8
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 5.2e-22 108.6 148 43.9
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 5.2e-22 108.6 150 48.0
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 8.9e-22 107.8 149 44.3
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 1.2e-21 107.5 151 47.7
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 1.2e-21 107.5 154 44.8
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 2.6e-21 106.3 168 44.6
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 4.4e-21 105.5 54 98.1
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 5.8e-21 105.1 149 43.6
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 7.5e-21 104.8 152 46.7
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 7.5e-21 104.8 152 46.7
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 7.5e-21 104.8 152 46.7
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 7.5e-21 104.8 150 44.7
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 9.8e-21 104.4 128 52.3
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 1.7e-20 103.6 152 46.1
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 2.2e-20 103.2 127 50.4
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 3.7e-20 102.4 150 44.7
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 3.7e-20 102.4 148 45.9
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 8.3e-20 101.3 139 48.2
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 8.3e-20 101.3 139 48.2
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 1.1e-19 100.9 155 47.1
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 1.1e-19 100.9 155 47.1
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 1.1e-19 100.9 155 47.1
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 7.8e-18 94.7 160 41.9
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 2.3e-17 93.2 131 42.0
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 3.0e-17 92.8 148 41.2
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 6.6e-17 91.7 129 43.4
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 8.6e-17 91.3 162 42.6
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 1.1e-16 90.9 107 45.8
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 4.3e-16 89.0 117 44.4
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 1.4e-14 84.0 105 47.6
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.1e-14 82.8 148 39.2
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 4.0e-14 82.4 118 44.9
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 2.0e-13 80.1 108 45.4
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 2.6e-13 79.7 108 45.4
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 4.4e-13 79.0 126 39.7
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 5.8e-13 78.6 106 45.3
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 7.6e-13 78.2 148 36.5
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 1.3e-12 77.4 148 37.8
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 1.3e-12 77.4 194 34.5
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 1.1e-11 74.3 176 35.2
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 2.4e-11 73.2 103 43.7
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 9.2e-11 71.2 54 66.7
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 2.1e-10 70.1 54 63.0
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 2.7e-10 69.7 54 59.3
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 2.7e-10 69.7 69 58.0
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 2.3e-09 66.6 54 61.1
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 3.9e-09 65.9 47 72.3
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 5.1e-09 65.5 115 36.5
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 4.3e-08 62.4 52 57.7
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 4.3e-08 62.4 144 31.9
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 2.1e-07 60.1 54 59.3
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 4.7e-07 58.9 53 58.5
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 1.4e-06 57.4 183 31.1
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 2.4e-06 56.6 77 44.2
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 5.2e-06 55.5 141 29.1


User provided reference genes

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