Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1696 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 9.9e-158 560.1 283 100.0
CDE05G0701 Ceratophyllum demersum HOM05D005271 ORTHO05D006072 2.6e-41 173.3 100 90.0
PSO541G1812 Papaver somniferum HOM05D005271 ORTHO05D006072 3.3e-28 129.8 94 71.3
PSO675G0749 Papaver somniferum HOM05D005271 ORTHO05D006072 5.6e-28 129.0 94 70.2
PSO782G3340 Papaver somniferum HOM05D005271 ORTHO05D006072 1.3e-27 127.9 97 68.0
FAN21G0135 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.6e-27 127.5 136 55.1
PGR142G2670 Punica granatum HOM05D005271 ORTHO05D006072 3.7e-27 126.3 86 74.4
Cc10_g11580 Coffea canephora HOM05D005271 ORTHO05D006072 6.2e-27 125.6 94 69.1
Dinv31186 Davidia involucrata HOM05D005271 ORTHO05D006072 8.2e-27 125.2 86 74.4
TWI63G0865 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 1.1e-26 124.8 98 67.3
CSS0040197 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 1.4e-26 124.4 85 75.3
FvH4_3g12930 Fragaria vesca HOM05D005271 ORTHO05D006072 1.4e-26 124.4 105 63.8
FAN11G1405 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.4e-26 124.4 105 63.8
FAN16G1303 Fragaria x ananassa HOM05D005271 ORTHO05D006072 1.4e-26 124.4 105 63.8
Cfa001130 Carpinus fangiana HOM05D005271 ORTHO05D006072 2.4e-26 123.6 101 65.3
FAN22G0530 Fragaria x ananassa HOM05D005271 ORTHO05D006072 3.1e-26 123.2 86 69.8
FvH4_4g01060 Fragaria vesca HOM05D005271 ORTHO05D006072 9.0e-26 121.7 86 69.8
FAN12G2425 Fragaria x ananassa HOM05D005271 ORTHO05D006072 9.0e-26 121.7 86 69.8
Oeu017888.1 Olea europaea HOM05D005271 ORTHO05D006072 9.0e-26 121.7 106 63.2
CiPaw.09G137400 Carya illinoinensis HOM05D005271 ORTHO05D006072 1.5e-25 120.9 113 57.5
ClCG01G025510 Citrullus lanatus HOM05D005271 ORTHO05D006072 1.5e-25 120.9 94 69.1
arahy.Tifrunner.gnm1.ann1.0KQV7A Arachis hypogaea HOM05D005271 ORTHO05D006072 2.0e-25 120.6 106 60.4
arahy.Tifrunner.gnm1.ann1.31Z3CL Arachis hypogaea HOM05D005271 ORTHO05D006072 2.0e-25 120.6 106 60.4
Sed0007631 Sechium edule HOM05D005271 ORTHO05D006072 2.0e-25 120.6 94 70.2
Hma1.2p1_0088F.1_g045170 Hydrangea macrophylla HOM05D005271 ORTHO05D006072 2.6e-25 120.2 105 63.8
Manes.01G042100 Manihot esculenta HOM05D005271 ORTHO05D006072 2.6e-25 120.2 103 62.1
TWI15G1056 Tripterygium wilfordii HOM05D005271 ORTHO05D006072 2.6e-25 120.2 98 64.3
TAR627G0156 Trochodendron aralioides HOM05D005271 ORTHO05D006072 2.6e-25 120.2 98 67.3
Prupe.4G117300 Prunus persica HOM05D005271 ORTHO05D006072 3.4e-25 119.8 103 62.1
Gohir.D09G227900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 4.5e-25 119.4 85 68.2
Gorai.006G250600 Gossypium raimondii HOM05D005271 ORTHO05D006072 4.5e-25 119.4 85 68.2
Nn7g38328 Nelumbo nucifera HOM05D005271 ORTHO05D006072 4.5e-25 119.4 86 70.9
Potri.001G160500 Populus trichocarpa HOM05D005271 ORTHO05D006072 4.5e-25 119.4 105 60.0
TAR629G0996 Trochodendron aralioides HOM05D005271 ORTHO05D006072 4.5e-25 119.4 92 69.6
Aqoxy1G00251 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 5.8e-25 119.0 85 74.1
arahy.Tifrunner.gnm1.ann1.5IT82G Arachis hypogaea HOM05D005271 ORTHO05D006072 5.8e-25 119.0 106 60.4
PSO170G3626 Papaver somniferum HOM05D005271 ORTHO05D006072 5.8e-25 119.0 82 74.4
Actinidia22429 Actinidia chinensis HOM05D005271 ORTHO05D006072 7.6e-25 118.6 85 71.8
Gohir.A09G226900 Gossypium hirsutum HOM05D005271 ORTHO05D006072 7.6e-25 118.6 85 67.1
Psat0s5346g0120 Pisum sativum HOM05D005271 ORTHO05D006072 7.6e-25 118.6 87 66.7
QL11p012305 Quercus lobata HOM05D005271 ORTHO05D006072 7.6e-25 118.6 91 65.9
DCAR_002456 Daucus carota HOM05D005271 ORTHO05D006072 1.3e-24 117.9 86 68.6
DCAR_002458 Daucus carota HOM05D005271 ORTHO05D006072 1.3e-24 117.9 86 68.6
Manes.05G190800 Manihot esculenta HOM05D005271 ORTHO05D006072 1.3e-24 117.9 103 62.1
Cpa.g.sc51.137 Carica papaya HOM05D005271 ORTHO05D006072 1.7e-24 117.5 85 70.6
RcHm_v2.0_Chr5g0021041 Rosa chinensis HOM05D005271 ORTHO05D006072 1.7e-24 117.5 105 60.0
CsaV3_6G052780 Cucumis sativus L. HOM05D005271 ORTHO05D006072 2.2e-24 117.1 94 68.1
Thecc.04G266100 Theobroma cacao HOM05D005271 ORTHO05D006072 2.2e-24 117.1 86 66.3
CANSAT25G1004 Cannabis sativa HOM05D005271 ORTHO05D006072 2.9e-24 116.7 86 67.4
arahy.Tifrunner.gnm1.ann1.VX2J7C Arachis hypogaea HOM05D005271 ORTHO05D006072 3.8e-24 116.3 106 58.5
Duzib151G0973 Durio zibethinus HOM05D005271 ORTHO05D006072 3.8e-24 116.3 86 68.6
Duzib212G0597 Durio zibethinus HOM05D005271 ORTHO05D006072 3.8e-24 116.3 86 64.0
THA.LOC104800917 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 3.8e-24 116.3 96 62.5
MSTRG.22460 Avicennia marina HOM05D005271 ORTHO05D006072 4.9e-24 115.9 87 69.0
THA.LOC104815870 Tarenaya hassleriana HOM05D005271 ORTHO05D006072 4.9e-24 115.9 103 62.1
Migut.N03355 Erythranthe guttata HOM05D005271 ORTHO05D006072 6.5e-24 115.5 105 59.0
Glyma.19G010500 Glycine max HOM05D005271 ORTHO05D006072 8.4e-24 115.2 87 65.5
HanXRQChr14g0428301 Helianthus annuus HOM05D005271 ORTHO05D006072 8.4e-24 115.2 105 60.0
CAN.G350.33 Capsicum annuum HOM05D005271 ORTHO05D006072 1.1e-23 114.8 107 59.8
Ciclev10017270m.g Citrus clementina HOM05D005271 ORTHO05D006072 1.1e-23 114.8 94 63.8
Sabra01G0131700 Salix brachista HOM05D005271 ORTHO05D006072 1.1e-23 114.8 99 62.6
Atru.chr1.851 Acer truncatum HOM05D005271 ORTHO05D006072 1.4e-23 114.4 94 63.8
Lj2g0008924 Lotus japonicus HOM05D005271 ORTHO05D006072 1.9e-23 114.0 106 59.4
Rhsim04G0167900 Rhododendron simsii HOM05D005271 ORTHO05D006072 1.9e-23 114.0 96 63.5
vmacro03554 Vaccinium macrocarpon HOM05D005271 ORTHO05D006072 1.9e-23 114.0 100 62.0
GSVIVG01012142001 Vitis vinifera HOM05D005271 ORTHO05D006072 1.9e-23 114.0 86 70.9
Ca_28197_v3 Cicer arietinum L. HOM05D005271 ORTHO05D006072 2.5e-23 113.6 87 66.7
Ah.05g173390 Amaranthus hybridus HOM05D005271 ORTHO05D006072 3.2e-23 113.2 103 58.3
CARHR125350 Cardamine hirsuta HOM05D005271 ORTHO05D006072 3.2e-23 113.2 105 61.0
Nitab4.5_0004741g0030 Nicotiana tabacum HOM05D005271 ORTHO05D006072 3.2e-23 113.2 96 59.4
AL4G26950 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 4.2e-23 112.8 86 66.3
arahy.Tifrunner.gnm1.ann1.FU3306 Arachis hypogaea HOM05D005271 ORTHO05D006072 4.2e-23 112.8 106 58.5
ATR1120G033 Amborella trichopoda HOM05D005271 ORTHO05D006072 5.5e-23 112.5 106 55.7
MELO3C007032.2 Cucumis melo HOM05D005271 ORTHO05D006072 5.5e-23 112.5 94 64.9
Lsat_1_v5_gn_2_4960 Lactuca sativa HOM05D005271 ORTHO05D006072 5.5e-23 112.5 85 64.7
Nitab4.5_0002741g0010 Nicotiana tabacum HOM05D005271 ORTHO05D006072 7.1e-23 112.1 86 65.1
BcaC01g05934 Brassica carinata HOM05D000364 ORTHO05D006072 9.3e-23 111.7 96 61.5
C03p20920 Brassica napus HOM05D000364 ORTHO05D006072 9.3e-23 111.7 96 61.5
Glyma.13G170400 Glycine max HOM05D005271 ORTHO05D006072 9.3e-23 111.7 87 64.4
Medtr6g017185 Medicago truncatula HOM05D005271 ORTHO05D006072 9.3e-23 111.7 99 57.6
Aa31LG5G5280 Aethionema arabicum HOM05D005271 ORTHO05D006072 1.2e-22 111.3 86 65.1
AT2G31710 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 1.2e-22 111.3 86 66.3
BraA04t17934Z Brassica rapa HOM05D005271 ORTHO05D006072 1.2e-22 111.3 86 65.1
MD10G1227700 Malus domestica HOM05D005271 ORTHO05D006072 1.2e-22 111.3 88 68.2
AL1G15680 Arabidopsis lyrata HOM05D005271 ORTHO05D006072 1.6e-22 110.9 86 66.3
Thhalv10017819m.g Eutrema salsugineum HOM05D005271 ORTHO05D006072 1.6e-22 110.9 146 49.3
MD05G1247100 Malus domestica HOM05D005271 ORTHO05D006072 1.6e-22 110.9 92 66.3
SGA_v2.0_scaffold149G36579 Striga asiatica HOM05D005271 ORTHO05D006072 1.6e-22 110.9 100 57.0
VMungo0464G2009 Vigna mungo HOM05D005271 ORTHO05D006072 1.6e-22 110.9 104 57.7
ECA238G4336 Erigeron canadensis HOM05D005271 ORTHO05D006072 2.1e-22 110.5 105 57.1
Phvul.004G017800 Phaseolus vulgaris HOM05D005271 ORTHO05D006072 2.1e-22 110.5 104 56.7
CARHR005290 Cardamine hirsuta HOM05D005271 ORTHO05D006072 2.7e-22 110.2 98 59.2
Sc10g0007720 Simmondsia chinensis HOM05D005271 ORTHO05D006072 2.7e-22 110.2 99 59.6
HPP92_012976 Vanilla planifolia HOM05D005271 ORTHO05D006072 2.7e-22 110.2 103 56.3
Cc03_g07280 Coffea canephora HOM05D005271 ORTHO05D006072 3.5e-22 109.8 81 70.4
BcaB06g28531 Brassica carinata HOM05D005271 ORTHO05D006072 4.6e-22 109.4 86 64.0
C04p60870 Brassica napus HOM05D005271 ORTHO05D006072 4.6e-22 109.4 86 64.0
BolC4t27578H Brassica oleracea HOM05D005271 ORTHO05D006072 4.6e-22 109.4 86 64.0
Gohir.A10G107101 Gossypium hirsutum HOM05D005271 ORTHO05D006072 4.6e-22 109.4 85 61.2
SalBow1G3231 Salvia bowleyana HOM05D005271 ORTHO05D006072 4.6e-22 109.4 87 63.2
AT1G05780 Arabidopsis thaliana HOM05D005271 ORTHO05D006072 7.9e-22 108.6 104 57.7
A04p24140 Brassica napus HOM05D005271 ORTHO05D006072 7.9e-22 108.6 86 64.0
Carub.0004s1300 Capsella rubella HOM05D005271 ORTHO05D006072 7.9e-22 108.6 86 64.0
HanXRQChr06g0184021 Helianthus annuus HOM05D005271 ORTHO05D006072 1.0e-21 108.2 112 55.4
SalBow6G1192 Salvia bowleyana HOM05D005271 ORTHO05D006072 1.0e-21 108.2 87 62.1
Migut.C01265 Erythranthe guttata HOM05D005271 ORTHO05D006072 2.3e-21 107.1 94 61.7
Lalb_Chr02g0160001 Lupinus albus HOM05D005271 ORTHO05D006072 3.0e-21 106.7 87 63.2
Lalb_Chr02g0160211 Lupinus albus HOM05D005271 ORTHO05D006072 3.0e-21 106.7 87 63.2
EL10Ac1g00803 Beta vulgaris HOM05D005271 ORTHO05D006072 3.9e-21 106.3 121 51.2
Oeu021212.1 Olea europaea HOM05D005271 ORTHO05D006072 5.1e-21 105.9 100 61.0
Zm00001eb071020 Zea mays HOM05D005271 ORTHO05D006072 5.1e-21 105.9 86 61.6
BraA03t11049Z Brassica rapa HOM05D000364 ORTHO05D006072 6.7e-21 105.5 86 62.8
BcaB01g04025 Brassica carinata HOM05D005271 ORTHO05D006072 8.7e-21 105.1 82 64.6
Peaxi162Scf00004g02726 Petunia axillaris HOM05D005271 ORTHO05D006072 8.7e-21 105.1 131 49.6
A03p17850 Brassica napus HOM05D000364 ORTHO05D006072 1.9e-20 104.0 86 61.6
A05p13810 Brassica napus HOM05D005271 ORTHO05D006072 3.3e-20 103.2 104 55.8
C04p18180 Brassica napus HOM05D005271 ORTHO05D006072 3.3e-20 103.2 104 56.7
BolC4t23374H Brassica oleracea HOM05D005271 ORTHO05D006072 3.3e-20 103.2 104 56.7
Rhsim12G0144200 Rhododendron simsii HOM05D005271 ORTHO05D006072 3.3e-20 103.2 125 51.2
Sopen11g025310 Solanum pennellii HOM05D005271 ORTHO05D006072 5.7e-20 102.4 94 61.7
Ah.01g016950 Amaranthus hybridus HOM05D005271 ORTHO05D006072 7.4e-20 102.1 85 63.5
Os04g0612900 Oryza sativa ssp. japonica HOM05D005271 ORTHO05D006072 9.7e-20 101.7 86 60.5
SGA_v2.0_scaffold118G32500 Striga asiatica HOM05D005271 ORTHO05D006072 1.6e-19 100.9 106 58.5
unitig_0.g914 Utricularia gibba HOM05D000362 ORTHO05D000325 2.2e-19 100.5 87 55.2
BcaB02g10411 Brassica carinata HOM05D000896 ORTHO05D006072 2.8e-19 100.1 104 55.8
BcaC02g11279 Brassica carinata HOM05D005271 ORTHO05D006072 3.7e-19 99.8 86 61.6
AUR62023913 Chenopodium quinoa HOM05D005271 ORTHO05D006072 1.4e-18 97.8 85 57.6
SalBow7G2991 Salvia bowleyana HOM05D005271 ORTHO05D006072 2.4e-18 97.1 87 62.1
AUR62038333 Chenopodium quinoa HOM05D005271 ORTHO05D006072 2.0e-17 94.0 86 54.7
MBI02_g01139_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 2.9e-16 90.1 56 82.1
Pp3c12_11530 Physcomitrium patens HOM05D005271 ORTHO05D006072 1.4e-15 87.8 98 48.0
Haze_05264 Corylus avellana HOM05D005271 ORTHO05D006072 4.6e-14 82.8 71 64.8
MBI14_g01725_MAGBIO Magnolia biondii HOM05D005271 ORTHO05D006072 4.6e-14 82.8 75 64.0
Mapoly0098s0021 Marchantia polymorpha HOM05D005271 ORTHO05D006072 6.1e-14 82.4 86 53.5
CSS0024418 Camellia sinensis var. sinensis HOM05D005271 ORTHO05D006072 1.4e-13 81.3 56 78.6
COL.COLO4_15978 Corchorus olitorius HOM05D005271 ORTHO05D006072 2.5e-12 77.0 75 56.0
SMO300G0007 Selaginella moellendorffii HOM05D005271 ORTHO05D006072 1.7e-11 74.3 83 44.6
Zm00001eb430740 Zea mays HOM05D005271 ORTHO05D006072 2.8e-11 73.6 69 59.4
Eucgr.H02355 Eucalyptus grandis HOM05D005271 ORTHO05D006072 1.1e-10 71.6 56 67.9
Hund17073 Selenicereus undatus HOM05D005271 ORTHO05D006072 1.1e-10 71.6 65 60.0
PGSC0003DMG400010917 Solanum tuberosum HOM05D005271 ORTHO05D006072 1.4e-10 71.2 75 56.0
AUR62004132 Chenopodium quinoa HOM05D005271 ORTHO05D006072 2.4e-10 70.5 59 69.5
Hund00748 Selenicereus undatus HOM05D005271 ORTHO05D006072 6.9e-10 68.9 56 64.3
EL10Ac9g21107 Beta vulgaris HOM05D005271 ORTHO05D006072 9.1e-10 68.6 57 64.9
Aqoxy3G03156 Aquilegia oxysepala HOM05D005271 ORTHO05D006072 6.5e-08 62.4 58 62.1


User provided reference genes

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