Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1694 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.2e-50 201.4 100 100.0
CDE05G0893 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 3.9e-24 114.8 62 82.3
Aqoxy7G03804 Aquilegia oxysepala HOM05D005302 ORTHO05D006422 5.3e-21 104.4 61 77.0
Gohir.A07G022700 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.5e-20 101.3 61 72.1
AL7G18970 Arabidopsis lyrata HOM05D005302 ORTHO05D006422 7.6e-20 100.5 61 70.5
AT4G32770 Arabidopsis thaliana HOM05D005302 ORTHO05D006422 7.6e-20 100.5 61 70.5
C07p59340 Brassica napus HOM05D005302 ORTHO05D006422 7.6e-20 100.5 61 70.5
BolC7t46379H Brassica oleracea HOM05D005302 ORTHO05D006422 7.6e-20 100.5 61 70.5
Thhalv10025006m.g Eutrema salsugineum HOM05D005302 ORTHO05D006422 7.6e-20 100.5 61 70.5
Solyc08g068570.4 Solanum lycopersicum HOM05D005302 ORTHO05D006422 7.6e-20 100.5 61 68.9
Sopen08g022330 Solanum pennellii HOM05D005302 ORTHO05D006422 7.6e-20 100.5 61 68.9
PGSC0003DMG400029051 Solanum tuberosum HOM05D005302 ORTHO05D006422 7.6e-20 100.5 61 68.9
Sp7g30530 Schrenkiella parvula HOM05D005302 ORTHO05D006422 9.9e-20 100.1 61 68.9
Gohir.D07G026100 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.7e-19 99.4 61 70.5
Gorai.001G027200 Gossypium raimondii HOM05D005302 ORTHO05D006422 1.7e-19 99.4 61 70.5
Nitab4.5_0010908g0010 Nicotiana tabacum HOM05D005302 ORTHO05D006422 1.7e-19 99.4 61 68.9
CAN.G21.50 Capsicum annuum HOM05D005302 ORTHO05D006422 2.2e-19 99.0 61 67.2
CARHR240760 Cardamine hirsuta HOM05D005302 ORTHO05D006422 2.2e-19 99.0 61 68.9
HanXRQChr08g0236291 Helianthus annuus HOM05D005302 ORTHO05D006422 2.2e-19 99.0 61 72.1
A03p61580 Brassica napus HOM05D005302 ORTHO05D006422 2.9e-19 98.6 58 72.4
BraA03t15200Z Brassica rapa HOM05D005302 ORTHO05D006422 2.9e-19 98.6 58 72.4
TAR624G0168 Trochodendron aralioides HOM05D005302 ORTHO05D006422 2.9e-19 98.6 61 70.5
Carub.0007s0772 Capsella rubella HOM05D005302 ORTHO05D006422 3.8e-19 98.2 61 68.9
SEGI_29042 Sequoiadendron giganteum HOM05D005302 ORTHO05D006422 3.8e-19 98.2 61 70.5
ATR0315G120 Amborella trichopoda HOM05D005302 ORTHO05D006422 6.4e-19 97.4 59 67.8
Gorai.009G050600 Gossypium raimondii HOM05D005302 ORTHO05D006422 6.4e-19 97.4 61 68.9
THA.LOC104803808 Tarenaya hassleriana HOM05D005302 ORTHO05D006422 6.4e-19 97.4 61 68.9
HPP92_005269 Vanilla planifolia HOM05D005302 ORTHO05D006422 6.4e-19 97.4 61 68.9
Atru.chr7.2133 Acer truncatum HOM05D005302 ORTHO05D006422 8.4e-19 97.1 61 67.2
CiPaw.07G205300 Carya illinoinensis HOM05D005302 ORTHO05D006422 1.1e-18 96.7 61 68.9
ClCG08G012300 Citrullus lanatus HOM05D005302 ORTHO05D006422 1.1e-18 96.7 64 67.2
MELO3C011150.2 Cucumis melo HOM05D005302 ORTHO05D006422 1.1e-18 96.7 61 68.9
CsaV3_2G030970 Cucumis sativus L. HOM05D005302 ORTHO05D006422 1.1e-18 96.7 61 68.9
Gohir.D05G049300 Gossypium hirsutum HOM05D005302 ORTHO05D006422 1.1e-18 96.7 61 68.9
Peaxi162Scf00822g00210 Petunia axillaris HOM05D005302 ORTHO05D006422 1.1e-18 96.7 61 67.2
Cpa.g.sc7.259 Carica papaya HOM05D005302 ORTHO05D006422 1.4e-18 96.3 61 67.2
Ca_15604_v3 Cicer arietinum L. HOM05D005302 ORTHO05D006422 1.4e-18 96.3 61 68.9
TWI34G0390 Tripterygium wilfordii HOM05D005302 ORTHO05D006422 1.4e-18 96.3 61 68.9
COL.COLO4_18671 Corchorus olitorius HOM05D005302 ORTHO05D006422 1.9e-18 95.9 61 67.2
Duzib150G0232 Durio zibethinus HOM05D005302 ORTHO05D006422 1.9e-18 95.9 61 68.9
EL10Ac2g04046 Beta vulgaris HOM05D005302 ORTHO05D006422 3.2e-18 95.1 61 67.2
Migut.A00220 Erythranthe guttata HOM05D005302 ORTHO05D006422 3.2e-18 95.1 61 67.2
PSO210G0275 Papaver somniferum HOM05D005302 ORTHO05D006422 3.2e-18 95.1 61 67.2
PSO210G3865 Papaver somniferum HOM05D005302 ORTHO05D006422 3.2e-18 95.1 61 67.2
CANSAT25G0630 Cannabis sativa HOM05D005302 ORTHO05D006422 4.2e-18 94.7 61 67.2
AUR62009303 Chenopodium quinoa HOM05D005302 ORTHO05D006422 4.2e-18 94.7 61 65.6
AUR62041718 Chenopodium quinoa HOM05D005302 ORTHO05D006422 4.2e-18 94.7 61 65.6
Glyma.04G082500 Glycine max HOM05D005302 ORTHO05D006422 4.2e-18 94.7 61 67.2
Glyma.06G084100 Glycine max HOM05D005302 ORTHO05D006422 4.2e-18 94.7 61 67.2
Gohir.A05G047400 Gossypium hirsutum HOM05D005302 ORTHO05D006422 4.2e-18 94.7 61 67.2
Lalb_Chr08g0243151 Lupinus albus HOM05D005302 ORTHO05D006422 4.2e-18 94.7 61 67.2
Sed0007027 Sechium edule HOM05D005302 ORTHO05D006422 4.2e-18 94.7 61 67.2
Lsat_1_v5_gn_5_33600 Lactuca sativa HOM05D005302 ORTHO05D006422 5.4e-18 94.4 61 68.9
Medtr3g110160 Medicago truncatula HOM05D005302 ORTHO05D006422 5.4e-18 94.4 61 67.2
Prupe.1G450300 Prunus persica HOM05D005302 ORTHO05D006422 5.4e-18 94.4 61 67.2
VMungo1309G1003 Vigna mungo HOM05D005302 ORTHO05D006422 5.4e-18 94.4 61 67.2
CiPaw.08G024700 Carya illinoinensis HOM05D005302 ORTHO05D006422 7.1e-18 94.0 61 65.6
Cc08_g09240 Coffea canephora HOM05D005302 ORTHO05D006422 7.1e-18 94.0 61 65.6
Hma1.2p1_0393F.1_g143080 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 7.1e-18 94.0 61 67.2
MD15G1095400 Malus domestica HOM05D005302 ORTHO05D006422 7.1e-18 94.0 61 65.6
Oeu036363.2 Olea europaea HOM05D005302 ORTHO05D006422 7.1e-18 94.0 61 67.2
Thecc.09G042800 Theobroma cacao HOM05D005302 ORTHO05D006422 7.1e-18 94.0 61 65.6
GSVIVG01035645001 Vitis vinifera HOM05D005302 ORTHO05D006422 7.1e-18 94.0 61 65.6
AagrBONN_evm.TU.Sc2ySwM_368.1981 Anthoceros agrestis HOM05D005302 ORTHO05D006422 9.3e-18 93.6 59 69.5
FvH4_2g35770 Fragaria vesca HOM05D005302 ORTHO05D006422 9.3e-18 93.6 61 63.9
Manes.16G072000 Manihot esculenta HOM05D005302 ORTHO05D006422 9.3e-18 93.6 61 65.6
Eucgr.C02909 Eucalyptus grandis HOM05D005302 ORTHO05D006422 1.2e-17 93.2 61 65.6
Lj1g0015489 Lotus japonicus HOM05D005302 ORTHO05D006422 1.2e-17 93.2 61 65.6
Lj1g0022106 Lotus japonicus HOM05D005302 ORTHO05D006422 1.2e-17 93.2 61 65.6
Lj1g0026118 Lotus japonicus HOM05D005302 ORTHO05D006422 1.2e-17 93.2 61 65.6
LjContig00226g0022694 Lotus japonicus HOM05D005302 ORTHO05D006422 1.2e-17 93.2 61 65.6
LjContig00518g0000858 Lotus japonicus HOM05D005302 ORTHO05D006422 1.2e-17 93.2 61 65.6
MD08G1115600 Malus domestica HOM05D005302 ORTHO05D006422 1.2e-17 93.2 61 63.9
Cfa013356 Carpinus fangiana HOM05D005302 ORTHO05D006422 1.6e-17 92.8 61 65.6
Ciclev10008169m.g Citrus clementina HOM05D005302 ORTHO05D006422 1.6e-17 92.8 61 65.6
Nn2g11666 Nelumbo nucifera HOM05D005302 ORTHO05D006422 1.6e-17 92.8 61 65.6
RcHm_v2.0_Chr6g0306001 Rosa chinensis HOM05D005302 ORTHO05D006422 1.6e-17 92.8 61 65.6
Actinidia13324 Actinidia chinensis HOM05D005302 ORTHO05D006422 2.1e-17 92.4 61 65.6
Ah.16g105570 Amaranthus hybridus HOM05D005302 ORTHO05D006422 2.1e-17 92.4 61 62.3
Cfa013357 Carpinus fangiana HOM05D005302 ORTHO05D006422 2.1e-17 92.4 61 65.6
CDE08G0186 Ceratophyllum demersum HOM05D005302 ORTHO05D006422 2.1e-17 92.4 61 67.2
ECA246G0277 Erigeron canadensis HOM05D005302 ORTHO05D006422 2.1e-17 92.4 61 67.2
Phvul.009G108200 Phaseolus vulgaris HOM05D005302 ORTHO05D006422 2.1e-17 92.4 61 65.6
Psat5g022320 Pisum sativum HOM05D005302 ORTHO05D006422 2.7e-17 92.0 61 65.6
PGR044G1364 Punica granatum HOM05D005302 ORTHO05D006422 2.7e-17 92.0 61 65.6
MBI04_g05261_MAGBIO Magnolia biondii HOM05D005302 ORTHO05D006422 3.5e-17 91.7 64 62.5
Pp3c7_470 Physcomitrium patens HOM05D005302 ORTHO05D006422 3.5e-17 91.7 68 60.3
Hund19525 Selenicereus undatus HOM05D005302 ORTHO05D006422 3.5e-17 91.7 61 62.3
CSS0024291 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 4.6e-17 91.3 61 65.6
CSS0027627 Camellia sinensis var. sinensis HOM05D005302 ORTHO05D006422 4.6e-17 91.3 61 65.6
Lj7A704G81 Lonicera japonica HOM05D005302 ORTHO05D006422 4.6e-17 91.3 58 67.2
Lj8C588T0 Lonicera japonica HOM05D005302 ORTHO05D006422 4.6e-17 91.3 58 67.2
Potri.018G040200 Populus trichocarpa HOM05D005302 ORTHO05D006422 4.6e-17 91.3 61 63.9
Sc23g0005290 Simmondsia chinensis HOM05D005302 ORTHO05D006422 4.6e-17 91.3 61 65.6
MSTRG.11705 Avicennia marina HOM05D005302 ORTHO05D006422 6.0e-17 90.9 61 65.6
Cfa013434 Carpinus fangiana HOM05D005302 ORTHO05D006422 7.9e-17 90.5 61 65.6
Dinv14245 Davidia involucrata HOM05D005302 ORTHO05D006422 7.9e-17 90.5 61 62.3
Os02g0276500 Oryza sativa ssp. japonica HOM05D005302 ORTHO05D006422 7.9e-17 90.5 61 63.9
Haze_21992 Corylus avellana HOM05D005302 ORTHO05D006422 1.0e-16 90.1 61 63.9
QL12p029391 Quercus lobata HOM05D005302 ORTHO05D006422 1.0e-16 90.1 58 65.5
SGA_v2.0_scaffold103G29944 Striga asiatica HOM05D005302 ORTHO05D006422 1.0e-16 90.1 61 63.9
DCAR_003119 Daucus carota HOM05D005302 ORTHO05D006422 1.3e-16 89.7 57 68.4
Zm00001eb237270 Zea mays HOM05D005302 ORTHO05D006422 1.3e-16 89.7 61 63.9
Aa31LG2G17190 Aethionema arabicum HOM05D005302 ORTHO05D006422 1.8e-16 89.4 61 65.6
Cc07_g15020 Coffea canephora HOM05D005302 ORTHO05D006422 1.8e-16 89.4 57 66.7
Rhsim02G0179400 Rhododendron simsii HOM05D005302 ORTHO05D006422 2.3e-16 89.0 61 62.3
Sabra18G0040100 Salix brachista HOM05D005302 ORTHO05D006422 2.3e-16 89.0 58 63.8
unitig_32.g11070 Utricularia gibba HOM05D005302 ORTHO05D006422 2.3e-16 89.0 58 69.0
Haze_21877 Corylus avellana HOM05D005302 ORTHO05D006422 3.0e-16 88.6 61 62.3
Pp3c20_5100 Physcomitrium patens HOM05D005302 ORTHO05D006422 3.9e-16 88.2 78 55.1
SalBow4G1479 Salvia bowleyana HOM05D005302 ORTHO05D006422 5.1e-16 87.8 59 64.4
Hma1.2p1_1884F.1_g306470 Hydrangea macrophylla HOM05D005302 ORTHO05D006422 1.5e-15 86.3 54 68.5
Lj1g0000494 Lotus japonicus HOM05D005302 ORTHO05D006422 1.5e-15 86.3 58 65.5
FAN27G3010 Fragaria x ananassa HOM05D005302 ORTHO05D006422 1.9e-15 85.9 54 64.8
SMO351G0603 Selaginella moellendorffii HOM05D005302 ORTHO05D006422 1.9e-15 85.9 58 63.8
arahy.Tifrunner.gnm1.ann1.R6A5BY Arachis hypogaea HOM05D005302 ORTHO05D006422 2.5e-15 85.5 54 66.7
Mapoly0027s0036 Marchantia polymorpha HOM05D005302 ORTHO05D006422 2.5e-15 85.5 59 62.7
arahy.Tifrunner.gnm1.ann1.P7Z4SB Arachis hypogaea HOM05D005302 ORTHO05D006422 9.6e-15 83.6 54 64.8
CBR_g222 Chara braunii HOM05D005302 ORTHO05D006422 4.0e-13 78.2 62 59.7
vmacro11066 Vaccinium macrocarpon HOM05D005302 ORTHO05D006422 4.0e-13 78.2 51 62.7
Nitab4.5_0000513g0060 Nicotiana tabacum HOM05D005302 ORTHO05D006422 7.1e-10 67.4 51 58.8
FAN20G2881 Fragaria x ananassa HOM05D005302 ORTHO05D006422 6.0e-09 64.3 45 57.8
Cre01.g013801 Chlamydomonas reinhardtii HOM05D005302 ORTHO05D006422 5.1e-08 61.2 59 47.5
MCO11G337 Micromonas commoda HOM05D005302 ORTHO05D006422 8.2e-06 53.9 57 45.6


User provided reference genes

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