Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1663 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 2.5e-71 271.9 133 100.0
Nn1g07694 Nelumbo nucifera HOM05D004608 ORTHO05D006533 1.4e-61 239.6 130 86.2
Hund22995 Selenicereus undatus HOM05D004608 ORTHO05D006533 3.1e-61 238.4 125 90.4
Ciclev10008478m.g Citrus clementina HOM05D004608 ORTHO05D006533 6.9e-61 237.3 126 88.1
Dinv40894 Davidia involucrata HOM05D004608 ORTHO05D006533 9.0e-61 236.9 126 88.9
MD03G1039600 Malus domestica HOM05D004608 ORTHO05D006533 9.0e-61 236.9 126 89.7
Actinidia30368 Actinidia chinensis HOM05D004608 ORTHO05D006533 1.2e-60 236.5 126 88.9
Sabra16G0318300 Salix brachista HOM05D004608 ORTHO05D006533 1.2e-60 236.5 126 88.9
Thecc.07G005400 Theobroma cacao HOM05D004608 ORTHO05D006533 1.2e-60 236.5 126 88.1
Duzib213G0525 Durio zibethinus HOM05D004608 ORTHO05D006533 2.0e-60 235.7 126 88.1
MD11G1040100 Malus domestica HOM05D004608 ORTHO05D006533 2.0e-60 235.7 126 88.9
Potri.011G166100 Populus trichocarpa HOM05D004608 ORTHO05D006533 2.0e-60 235.7 126 88.9
GSVIVG01014786001 Vitis vinifera HOM05D004608 ORTHO05D006533 2.0e-60 235.7 126 87.3
Potri.001G469300 Populus trichocarpa HOM05D004608 ORTHO05D006533 2.6e-60 235.3 126 88.1
Atru.chr2.3848 Acer truncatum HOM05D004608 ORTHO05D006533 3.4e-60 235.0 126 88.1
arahy.Tifrunner.gnm1.ann1.EI2AUC Arachis hypogaea HOM05D004608 ORTHO05D006533 3.4e-60 235.0 130 84.6
arahy.Tifrunner.gnm1.ann1.R4UTE8 Arachis hypogaea HOM05D004608 ORTHO05D006533 3.4e-60 235.0 130 84.6
Haze_09894 Corylus avellana HOM05D004608 ORTHO05D006533 3.4e-60 235.0 126 88.1
Nitab4.5_0007214g0010 Nicotiana tabacum HOM05D004608 ORTHO05D006533 4.5e-60 234.6 126 87.3
Rhsim06G0233900 Rhododendron simsii HOM05D004608 ORTHO05D006533 4.5e-60 234.6 126 89.7
CSS0047803 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 5.9e-60 234.2 126 88.1
Duzib268G0270 Durio zibethinus HOM05D004608 ORTHO05D006533 5.9e-60 234.2 126 87.3
Lj1C897G12 Lonicera japonica HOM05D004608 ORTHO05D006533 5.9e-60 234.2 126 88.1
Cfa016939 Carpinus fangiana HOM05D004608 ORTHO05D006533 7.7e-60 233.8 126 87.3
Gohir.D05G386600 Gossypium hirsutum HOM05D004608 ORTHO05D006533 7.7e-60 233.8 126 88.1
Gorai.009G453300 Gossypium raimondii HOM05D004608 ORTHO05D006533 7.7e-60 233.8 126 88.1
CiPaw.12G141700 Carya illinoinensis HOM05D004608 ORTHO05D006533 1.0e-59 233.4 126 87.3
COL.COLO4_07760 Corchorus olitorius HOM05D004608 ORTHO05D006533 1.0e-59 233.4 126 88.1
MBI14_g00953_MAGBIO Magnolia biondii HOM05D004608 ORTHO05D006533 1.0e-59 233.4 126 87.3
Nitab4.5_0001622g0040 Nicotiana tabacum HOM05D004608 ORTHO05D006533 1.0e-59 233.4 126 86.5
Sabra11G0139800 Salix brachista HOM05D004608 ORTHO05D006533 1.0e-59 233.4 126 87.3
EL10Ac4g07509 Beta vulgaris HOM05D004608 ORTHO05D006533 1.3e-59 233.0 125 88.8
VMungo0540G0162 Vigna mungo HOM05D004608 ORTHO05D006533 1.3e-59 233.0 125 88.0
vmacro11628 Vaccinium macrocarpon HOM05D004608 ORTHO05D006533 1.7e-59 232.6 126 88.9
Cpa.g.sc12.91 Carica papaya HOM05D004608 ORTHO05D006533 2.2e-59 232.3 126 88.9
Peaxi162Scf00219g00158 Petunia axillaris HOM05D004608 ORTHO05D006533 2.2e-59 232.3 126 85.7
Prupe.6G031700 Prunus persica HOM05D004608 ORTHO05D006533 2.2e-59 232.3 126 86.5
Psat5g164640 Pisum sativum HOM05D004608 ORTHO05D006533 3.8e-59 231.5 126 86.5
PGR031G2516 Punica granatum HOM05D004608 ORTHO05D006533 3.8e-59 231.5 126 86.5
Glyma.08G337500 Glycine max HOM05D004608 ORTHO05D006533 5.0e-59 231.1 125 88.0
Glyma.18G072500 Glycine max HOM05D004608 ORTHO05D006533 5.0e-59 231.1 125 88.0
Gohir.A13G130142 Gossypium hirsutum HOM05D004608 ORTHO05D006533 5.0e-59 231.1 126 86.5
Manes.05G206400 Manihot esculenta HOM05D004608 ORTHO05D006533 5.0e-59 231.1 126 87.3
Ah.06g180960 Amaranthus hybridus HOM05D004608 ORTHO05D006533 6.5e-59 230.7 125 88.0
Gohir.A04G003100 Gossypium hirsutum HOM05D004608 ORTHO05D006533 6.5e-59 230.7 126 87.3
Gohir.D13G133200 Gossypium hirsutum HOM05D004608 ORTHO05D006533 6.5e-59 230.7 126 86.5
Gorai.013G149500 Gossypium raimondii HOM05D004608 ORTHO05D006533 6.5e-59 230.7 126 86.5
Lj6g0013957 Lotus japonicus HOM05D004608 ORTHO05D006533 6.5e-59 230.7 126 87.3
Lalb_Chr15g0082461 Lupinus albus HOM05D004608 ORTHO05D006533 6.5e-59 230.7 126 87.3
TPR.G17932 Trifolium pratense HOM05D004608 ORTHO05D006533 6.5e-59 230.7 125 87.2
TWI38G2408 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 6.5e-59 230.7 128 85.2
Ca_14850_v3 Cicer arietinum L. HOM05D004608 ORTHO05D006533 8.5e-59 230.3 126 85.7
Eucgr.F03661 Eucalyptus grandis HOM05D004608 ORTHO05D006533 1.1e-58 229.9 126 86.5
MSTRG.7029 Avicennia marina HOM05D004608 ORTHO05D006533 1.9e-58 229.2 125 85.6
CANSAT11G0422 Cannabis sativa HOM05D004608 ORTHO05D006533 1.9e-58 229.2 126 84.9
QL08p001615 Quercus lobata HOM05D004608 ORTHO05D006533 1.9e-58 229.2 126 85.7
DCAR_017596 Daucus carota HOM05D004608 ORTHO05D006533 3.2e-58 228.4 126 84.1
Migut.M01599 Erythranthe guttata HOM05D004608 ORTHO05D006533 3.2e-58 228.4 126 85.7
SGA_v2.0_scaffold168G38588 Striga asiatica HOM05D004608 ORTHO05D006533 3.2e-58 228.4 130 81.5
FvH4_3g42010 Fragaria vesca HOM05D004608 ORTHO05D006533 4.2e-58 228.0 126 85.7
FAN11G3108 Fragaria x ananassa HOM05D004608 ORTHO05D006533 4.2e-58 228.0 126 85.7
FAN16G3187 Fragaria x ananassa HOM05D004608 ORTHO05D006533 4.2e-58 228.0 126 85.7
FAN21G2140 Fragaria x ananassa HOM05D004608 ORTHO05D006533 4.2e-58 228.0 126 85.7
FAN25G0703 Fragaria x ananassa HOM05D004608 ORTHO05D006533 4.2e-58 228.0 126 85.7
Aqoxy4G02317 Aquilegia oxysepala HOM05D004608 ORTHO05D006533 5.5e-58 227.6 130 83.8
ClCG09G021670 Citrullus lanatus HOM05D004608 ORTHO05D006533 5.5e-58 227.6 126 86.5
CsaV3_7G021370 Cucumis sativus L. HOM05D004608 ORTHO05D006533 5.5e-58 227.6 126 87.3
Sed0006020 Sechium edule HOM05D004608 ORTHO05D006533 5.5e-58 227.6 126 87.3
THA.LOC104815684 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 5.5e-58 227.6 126 85.7
TWI38G1265 Tripterygium wilfordii HOM05D004608 ORTHO05D006533 7.2e-58 227.3 128 82.8
AUR62035639 Chenopodium quinoa HOM05D004608 ORTHO05D006533 9.4e-58 226.9 126 85.7
AUR62017165 Chenopodium quinoa HOM05D004608 ORTHO05D006533 1.2e-57 226.5 126 85.7
CSS0013715 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 1.6e-57 226.1 126 86.5
THA.LOC104801910 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 2.7e-57 225.3 126 84.9
THA.LOC104810298 Tarenaya hassleriana HOM05D004608 ORTHO05D006533 2.7e-57 225.3 126 84.9
Phvul.006G060300 Phaseolus vulgaris HOM05D004608 ORTHO05D006533 3.6e-57 224.9 121 87.6
CAN.G492.45 Capsicum annuum HOM05D004608 ORTHO05D006533 4.6e-57 224.6 126 84.1
Carub.0003s1265 Capsella rubella HOM05D004608 ORTHO05D006533 6.1e-57 224.2 125 85.6
Lsat_1_v5_gn_7_116460 Lactuca sativa HOM05D004608 ORTHO05D006533 7.9e-57 223.8 126 85.7
Sp3g11470 Schrenkiella parvula HOM05D004608 ORTHO05D006533 7.9e-57 223.8 126 84.1
Sed0022757 Sechium edule HOM05D004608 ORTHO05D006533 7.9e-57 223.8 125 86.4
ATR0587G001 Amborella trichopoda HOM05D004608 ORTHO05D006533 1.0e-56 223.4 128 82.8
AL3G25090 Arabidopsis lyrata HOM05D004608 ORTHO05D006533 1.0e-56 223.4 126 84.1
Thhalv10020839m.g Eutrema salsugineum HOM05D004608 ORTHO05D006533 1.0e-56 223.4 126 84.1
HanXRQChr05g0160221 Helianthus annuus HOM05D004608 ORTHO05D006533 1.0e-56 223.4 126 84.9
AT3G13235 Arabidopsis thaliana HOM05D004608 ORTHO05D006533 1.8e-56 222.6 126 83.3
HanXRQChr11g0334621 Helianthus annuus HOM05D004608 ORTHO05D006533 3.0e-56 221.9 126 84.1
Cc05_g15480 Coffea canephora HOM05D004608 ORTHO05D006533 3.9e-56 221.5 126 84.1
Os02g0198600 Oryza sativa ssp. japonica HOM05D004608 ORTHO05D006533 3.9e-56 221.5 125 85.6
HPP92_021912 Vanilla planifolia HOM05D004608 ORTHO05D006533 3.9e-56 221.5 127 85.8
RcHm_v2.0_Chr5g0075221 Rosa chinensis HOM05D004608 ORTHO05D006533 6.7e-56 220.7 126 82.5
PGSC0003DMG400014406 Solanum tuberosum HOM05D004608 ORTHO05D006533 6.7e-56 220.7 126 84.1
ECA236G2785 Erigeron canadensis HOM05D004608 ORTHO05D006533 2.5e-55 218.8 126 83.3
A03p38110 Brassica napus HOM05D004608 ORTHO05D006533 3.3e-55 218.4 126 81.7
BraA03t12964Z Brassica rapa HOM05D004608 ORTHO05D006533 3.3e-55 218.4 126 81.7
PSO541G2325 Papaver somniferum HOM05D004608 ORTHO05D006533 4.3e-55 218.0 118 84.7
Oeu026626.2 Olea europaea HOM05D004608 ORTHO05D006533 7.4e-55 217.2 130 79.2
CARHR087890 Cardamine hirsuta HOM05D004608 ORTHO05D006533 9.7e-55 216.9 125 82.4
Solyc10g005890.3 Solanum lycopersicum HOM05D004608 ORTHO05D006533 1.3e-54 216.5 129 79.8
Sopen10g001840 Solanum pennellii HOM05D004608 ORTHO05D006533 1.3e-54 216.5 129 79.8
Zm00001eb205890 Zea mays HOM05D004608 ORTHO05D006533 3.7e-54 214.9 125 81.6
C01p51800 Brassica napus HOM05D004608 ORTHO05D006533 1.4e-53 213.0 126 81.0
MELO3C013214.2 Cucumis melo HOM05D004608 ORTHO05D006533 5.3e-53 211.1 126 83.3
C03p46240 Brassica napus HOM05D004608 ORTHO05D006533 6.9e-53 210.7 132 77.3
BolC3t16895H Brassica oleracea HOM05D004608 ORTHO05D006533 9.1e-53 210.3 132 78.0
A01p40280 Brassica napus HOM05D004608 ORTHO05D006533 1.0e-51 206.8 127 79.5
BraA01t04064Z Brassica rapa HOM05D004608 ORTHO05D006533 1.0e-51 206.8 127 79.5
Aa31LG8G500 Aethionema arabicum HOM05D004608 ORTHO05D006533 3.2e-50 201.8 138 71.7
Pp3c4_20890 Physcomitrium patens HOM05D004608 ORTHO05D006533 7.2e-50 200.7 127 71.7
TAR626G0684 Trochodendron aralioides HOM05D004608 ORTHO05D006533 7.9e-49 197.2 105 88.6
AagrBONN_evm.TU.Sc2ySwM_117.3155 Anthoceros agrestis HOM05D004608 ORTHO05D006533 5.1e-48 194.5 128 68.8
Mapoly0030s0110 Marchantia polymorpha HOM05D004608 ORTHO05D006533 4.4e-47 191.4 118 75.4
Oeu019695.1 Olea europaea HOM05D004608 ORTHO05D006533 1.4e-45 186.4 126 73.0
CDE05G0237 Ceratophyllum demersum HOM05D004608 ORTHO05D006533 2.0e-44 182.6 146 68.5
CSS0026438 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 2.2e-43 179.1 101 84.2
CSS0036658 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 6.5e-43 177.6 101 83.2
CBR_g36902 Chara braunii HOM05D004608 ORTHO05D006533 3.2e-42 175.3 113 68.1
Actinidia10581 Actinidia chinensis HOM05D004608 ORTHO05D006533 3.0e-40 168.7 126 69.0
TAR624G0837 Trochodendron aralioides HOM05D004608 ORTHO05D006533 4.8e-38 161.4 125 68.0
AL5G25300 Arabidopsis lyrata HOM05D004608 ORTHO05D038587 1.8e-37 159.5 107 73.8
Hma1.2p1_0193F.1_g084100 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 7.0e-37 157.5 127 63.8
Hma1.2p1_2995F.1_g331425 Hydrangea macrophylla HOM05D004608 ORTHO05D006533 7.0e-37 157.5 127 63.8
BolC1t05127H Brassica oleracea HOM05D004608 ORTHO05D006533 3.2e-34 148.7 126 61.9
MCO11G772 Micromonas commoda HOM05D004608 ORTHO05D006533 2.0e-31 139.4 114 57.0
unitig_699.g19599 Utricularia gibba HOM05D004608 ORTHO05D006533 1.7e-30 136.3 125 52.0
PRCOL_00000426 Prasinoderma coloniale HOM05D004608 ORTHO05D006533 8.3e-30 134.0 113 55.8
unitig_899.g15266 Utricularia gibba HOM05D004608 ORTHO05D006533 4.1e-29 131.7 72 86.1
Cre10.g447300 Chlamydomonas reinhardtii HOM05D004608 ORTHO05D006533 4.5e-28 128.3 131 48.9
Cfa022177 Carpinus fangiana HOM05D004608 ORTHO05D006533 1.0e-27 127.1 123 50.4
Aa31LG10G470 Aethionema arabicum HOM05D004608 ORTHO05D006533 9.4e-26 120.6 105 56.2
AL3G34310 Arabidopsis lyrata HOM05D004608 ORTHO05D038587 1.0e-24 117.1 129 52.7
Aa31LG10G450 Aethionema arabicum HOM05D004608 ORTHO05D006533 1.2e-23 113.6 106 54.7
Pp3c17_4800 Physcomitrium patens HOM05D004608 ORTHO05D006533 2.8e-22 109.0 77 59.7
CSS0047513 Camellia sinensis var. sinensis HOM05D004608 ORTHO05D006533 3.7e-22 108.6 58 84.5
Sc03g0011700 Simmondsia chinensis HOM05D004608 ORTHO05D006533 5.4e-21 104.8 62 82.3
Oeu019694.2 Olea europaea HOM05D004608 ORTHO05D006533 2.3e-19 99.4 56 83.9
A05p36340 Brassica napus HOM05D004608 ORTHO05D006533 2.0e-15 86.3 48 85.4
VMungo0954G0002 Vigna mungo HOM05D004608 ORTHO05D432787 3.4e-15 85.5 47 83.0
Glyma.10G116100 Glycine max HOM05D004608 ORTHO05D021061 1.2e-07 60.5 50 56.0


User provided reference genes

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