Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1645 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 4.7e-85 318.9 344 100.0
CDE05G1147 Ceratophyllum demersum HOM05D007700 ORTHO05D009669 4.9e-50 202.6 463 54.0
Thhalv10022683m.g Eutrema salsugineum HOM05D007700 ORTHO05D009669 3.4e-19 100.1 81 54.3
Nn6g31772 Nelumbo nucifera HOM05D007700 ORTHO05D009669 1.3e-18 98.2 73 61.6
Atru.chr3.942 Acer truncatum HOM05D007700 ORTHO05D009669 1.7e-18 97.8 71 63.4
Actinidia22918 Actinidia chinensis HOM05D007700 ORTHO05D009669 8.4e-18 95.5 73 61.6
Eucgr.I02272 Eucalyptus grandis HOM05D007700 ORTHO05D009669 1.1e-17 95.1 72 61.1
Thecc.01G008500 Theobroma cacao HOM05D007700 ORTHO05D009669 1.9e-17 94.4 71 62.0
VMungo0331G0753 Vigna mungo HOM05D007700 ORTHO05D009669 1.9e-17 94.4 70 61.4
Aa31LG8G14930 Aethionema arabicum HOM05D007700 ORTHO05D009669 4.2e-17 93.2 81 50.6
MBI05_g43154_MAGBIO Magnolia biondii HOM05D007700 ORTHO05D009669 4.2e-17 93.2 73 60.3
CANSAT25G3310 Cannabis sativa HOM05D007700 ORTHO05D009669 7.1e-17 92.4 73 60.3
vmacro20514 Vaccinium macrocarpon HOM05D007700 ORTHO05D009669 9.3e-17 92.0 72 61.1
arahy.Tifrunner.gnm1.ann1.HE2L98 Arachis hypogaea HOM05D007700 ORTHO05D009669 2.7e-16 90.5 67 61.2
arahy.Tifrunner.gnm1.ann1.PXC5PH Arachis hypogaea HOM05D007700 ORTHO05D009669 2.7e-16 90.5 67 61.2
Glyma.07G109000 Glycine max HOM05D007700 ORTHO05D009669 2.7e-16 90.5 73 58.9
QL06p052538 Quercus lobata HOM05D007700 ORTHO05D009669 2.7e-16 90.5 73 56.2
Dinv08534 Davidia involucrata HOM05D007700 ORTHO05D009669 3.5e-16 90.1 72 56.9
HanXRQChr07g0192051 Helianthus annuus HOM05D007700 ORTHO05D009669 4.6e-16 89.7 73 57.5
ClCG01G020760 Citrullus lanatus HOM05D007700 ORTHO05D009669 6.0e-16 89.4 80 50.0
Sp3g31020 Schrenkiella parvula HOM05D007700 ORTHO05D009669 7.9e-16 89.0 79 50.6
Sopen02g027760 Solanum pennellii HOM05D007700 ORTHO05D009669 1.0e-15 88.6 73 54.8
PGSC0003DMG400040241 Solanum tuberosum HOM05D007700 ORTHO05D009669 1.0e-15 88.6 73 54.8
AL3G50640 Arabidopsis lyrata HOM05D007700 ORTHO05D009669 1.8e-15 87.8 80 47.5
AT2G17670 Arabidopsis thaliana HOM05D007700 ORTHO05D009669 1.8e-15 87.8 80 47.5
Sabra05G0085500 Salix brachista HOM05D007700 ORTHO05D009669 3.0e-15 87.0 74 54.1
BcaB07g31715 Brassica carinata HOM05D007700 ORTHO05D009669 5.1e-15 86.3 79 51.9
Lj2P490T20 Lonicera japonica HOM05D007700 ORTHO05D009669 1.1e-14 85.1 80 52.5
Rhsim10G0201800 Rhododendron simsii HOM05D000242 ORTHO05D009669 1.1e-14 85.1 72 56.9
Rhsim10G0203000 Rhododendron simsii HOM05D000242 ORTHO05D009669 1.1e-14 85.1 72 56.9
C09p13500 Brassica napus HOM05D007700 ORTHO05D009669 1.5e-14 84.7 90 48.9
Lj3g0022870 Lotus japonicus HOM05D007700 ORTHO05D009669 1.5e-14 84.7 79 48.1
BcaC04g22956 Brassica carinata HOM05D007700 ORTHO05D009669 1.9e-14 84.3 90 48.9
BolC9t54240H Brassica oleracea HOM05D007700 ORTHO05D009669 1.9e-14 84.3 90 48.9
HPP92_025432 Vanilla planifolia HOM05D007700 ORTHO05D009669 1.9e-14 84.3 70 51.4
A09p11480 Brassica napus HOM05D007700 ORTHO05D009669 4.3e-14 83.2 90 47.8
BraA09t36788Z Brassica rapa HOM05D007700 ORTHO05D009669 4.3e-14 83.2 90 47.8
Potri.005G103300 Populus trichocarpa HOM05D007700 ORTHO05D009669 4.3e-14 83.2 72 54.2
Sed0015131 Sechium edule HOM05D000242 ORTHO05D009669 5.6e-14 82.8 81 50.6
MELO3C007960.2 Cucumis melo HOM05D007700 ORTHO05D009669 7.4e-14 82.4 80 47.5
DCAR_023138 Daucus carota HOM05D007700 ORTHO05D009669 1.3e-13 81.6 72 54.2
Gohir.D03G003800 Gossypium hirsutum HOM05D007700 ORTHO05D009669 2.8e-13 80.5 270 81.5
ATR0661G421 Amborella trichopoda HOM05D007700 ORTHO05D009669 6.9e-12 75.9 102 46.1
Cc00_g14260 Coffea canephora HOM05D007700 ORTHO05D009669 6.9e-12 75.9 70 51.4
Gorai.003G004000 Gossypium raimondii HOM05D007700 ORTHO05D009669 2.0e-11 74.3 270 80.7
TAR625G0909 Trochodendron aralioides HOM05D007700 ORTHO05D009669 2.0e-11 74.3 74 52.7
THA.LOC104804288 Tarenaya hassleriana HOM05D007700 ORTHO05D009669 4.5e-11 73.2 80 41.2
Gohir.A02G176100 Gossypium hirsutum HOM05D007700 ORTHO05D009669 2.2e-10 70.9 70 48.6
COL.COLO4_22522 Corchorus olitorius HOM05D007700 ORTHO05D009669 3.8e-10 70.1 44 70.5
Manes.01G153300 Manihot esculenta HOM05D007700 ORTHO05D009669 6.5e-10 69.3 73 46.6
CiPaw.07G004600 Carya illinoinensis HOM05D007700 ORTHO05D009669 1.4e-09 68.2 80 42.5
Ca_23118_v3 Cicer arietinum L. HOM05D007700 ORTHO05D009669 1.4e-09 68.2 81 40.7
Medtr8g005870 Medicago truncatula HOM05D007700 ORTHO05D009669 1.4e-09 68.2 81 40.7
Ciclev10025555m.g Citrus clementina HOM05D007700 ORTHO05D009669 2.5e-09 67.4 55 56.4
Psat4g208920 Pisum sativum HOM05D007700 ORTHO05D009669 1.2e-08 65.1 70 44.3
CSS0049050 Camellia sinensis var. sinensis HOM05D007700 ORTHO05D009669 2.1e-08 64.3 44 63.6
Haze_03682 Corylus avellana HOM05D006745 ORTHO05D008449 2.7e-08 63.9 77 42.9
EL10Ac6g13369 Beta vulgaris HOM05D007700 ORTHO05D009669 4.6e-08 63.2 40 72.5
Sp3g31030 Schrenkiella parvula HOM05D007700 ORTHO05D009669 4.6e-08 63.2 43 60.5
Phvul.010G056500 Phaseolus vulgaris HOM05D007700 ORTHO05D009669 6.0e-08 62.8 48 60.4
Cfa007052 Carpinus fangiana HOM05D007700 ORTHO05D009669 1.0e-07 62.0 77 41.6
Sc03g0003890 Simmondsia chinensis HOM05D007700 ORTHO05D009669 1.0e-07 62.0 40 67.5
Solyc02g082970.1 Solanum lycopersicum HOM05D007700 ORTHO05D009669 1.0e-07 62.0 73 43.8
CARHR107900 Cardamine hirsuta HOM05D007700 ORTHO05D009669 2.3e-07 60.8 43 62.8
Dinv40165 Davidia involucrata HOM05D007700 ORTHO05D009669 3.9e-07 60.1 73 43.8
Lsat_1_v5_gn_2_74520 Lactuca sativa HOM05D007700 ORTHO05D009669 5.1e-07 59.7 74 43.2
TPR.G28737 Trifolium pratense HOM05D007700 ORTHO05D009669 5.1e-07 59.7 70 41.4
CAN.G890.59 Capsicum annuum HOM05D007700 ORTHO05D009669 8.7e-07 58.9 72 41.7
CsaV3_6G047710 Cucumis sativus L. HOM05D007700 ORTHO05D009669 1.1e-06 58.5 80 36.2
Nitab4.5_0001581g0090 Nicotiana tabacum HOM05D007700 ORTHO05D009669 1.9e-06 57.8 73 39.7
SGA_v2.0_scaffold275G46573 Striga asiatica HOM05D007700 ORTHO05D009669 1.9e-06 57.8 40 65.0
Nitab4.5_0003207g0040 Nicotiana tabacum HOM05D007700 ORTHO05D009669 2.5e-06 57.4 73 39.7
Glyma.03G117900 Glycine max HOM05D007700 ORTHO05D009669 3.3e-06 57.0 73 45.2
ECA238G1378 Erigeron canadensis HOM05D007700 ORTHO05D009669 4.3e-06 56.6 38 65.8
PGR119G0746 Punica granatum HOM05D007700 ORTHO05D009669 4.3e-06 56.6 80 35.0
Os02g0468500 Oryza sativa ssp. japonica HOM05D007660 ORTHO05D009442 5.7e-06 56.2 82 39.0
Hund21880 Selenicereus undatus HOM05D000162 ORTHO05D000090 5.7e-06 56.2 70 35.7


User provided reference genes

Program Settings