Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1577 Ceratophyllum demersum HOM05D006378 ORTHO05D007959 7.5e-95 350.5 178 100.0
MBI19_g16222_MAGBIO Magnolia biondii HOM05D006378 ORTHO05D007959 6.9e-56 221.1 176 65.9
Nn8g38637 Nelumbo nucifera HOM05D006378 ORTHO05D007959 1.2e-55 220.3 173 64.2
TAR383G0342 Trochodendron aralioides HOM05D006378 ORTHO05D007959 1.5e-55 219.9 174 63.2
PSO135G0915 Papaver somniferum HOM05D006378 ORTHO05D007959 4.9e-54 214.9 176 60.2
Rhsim03G0227500 Rhododendron simsii HOM05D006378 ORTHO05D007959 5.4e-53 211.5 175 58.3
Dinv42394 Davidia involucrata HOM05D006378 ORTHO05D007959 7.1e-53 211.1 174 60.3
vmacro06342 Vaccinium macrocarpon HOM05D006378 ORTHO05D007959 1.2e-52 210.3 175 56.6
Potri.006G141900 Populus trichocarpa HOM05D006378 ORTHO05D007959 1.8e-51 206.5 177 57.1
DCAR_011949 Daucus carota HOM05D006378 ORTHO05D007959 3.9e-51 205.3 167 61.7
Hma1.2p1_0179F.1_g079520 Hydrangea macrophylla HOM05D006378 ORTHO05D007959 6.7e-51 204.5 182 59.3
PGSC0003DMG400019029 Solanum tuberosum HOM05D006378 ORTHO05D007959 1.5e-50 203.4 172 61.0
Sopen07g021350 Solanum pennellii HOM05D006378 ORTHO05D007959 1.9e-50 203.0 172 59.9
CSS0003361 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 2.5e-50 202.6 169 59.8
CSS0014220 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 2.5e-50 202.6 169 59.8
Manes.03G040400 Manihot esculenta HOM05D006378 ORTHO05D007959 2.5e-50 202.6 173 57.8
GSVIVG01015082001 Vitis vinifera HOM05D006378 ORTHO05D007959 2.5e-50 202.6 170 60.0
Sabra06G0111000 Salix brachista HOM05D006378 ORTHO05D007959 9.6e-50 200.7 177 55.9
Aqoxy7G04130 Aquilegia oxysepala HOM05D006378 ORTHO05D007959 1.6e-49 199.9 176 57.4
Migut.J00925 Erythranthe guttata HOM05D006378 ORTHO05D007959 1.6e-49 199.9 169 57.4
HanXRQChr06g0178331 Helianthus annuus HOM05D006378 ORTHO05D007959 1.6e-49 199.9 173 56.6
ClCG03G015080 Citrullus lanatus HOM05D006378 ORTHO05D007959 4.8e-49 198.4 172 58.1
AUR62028935 Chenopodium quinoa HOM05D006378 ORTHO05D007959 1.1e-48 197.2 176 55.1
MSTRG.19459 Avicennia marina HOM05D006378 ORTHO05D007959 1.4e-48 196.8 167 56.3
Thecc.09G076800 Theobroma cacao HOM05D006378 ORTHO05D007959 1.4e-48 196.8 169 57.4
Solyc07g041870.3 Solanum lycopersicum HOM05D006378 ORTHO05D007959 1.8e-48 196.4 172 58.7
CANSAT56G1041 Cannabis sativa HOM05D006378 ORTHO05D007959 6.9e-48 194.5 169 58.6
Oeu035912.1 Olea europaea HOM05D006378 ORTHO05D007959 6.9e-48 194.5 168 56.5
Sc08g0008890 Simmondsia chinensis HOM05D006378 ORTHO05D007959 6.9e-48 194.5 172 55.2
TPR.G28586 Trifolium pratense HOM05D006378 ORTHO05D007959 1.2e-47 193.7 173 54.3
Lsat_1_v5_gn_8_86460 Lactuca sativa HOM05D006378 ORTHO05D007959 1.5e-47 193.4 170 57.6
Lj7C687T7 Lonicera japonica HOM05D006378 ORTHO05D007959 2.6e-47 192.6 178 57.3
SalBow6G1560 Salvia bowleyana HOM05D006378 ORTHO05D007959 2.6e-47 192.6 172 53.5
AUR62025249 Chenopodium quinoa HOM05D006378 ORTHO05D007959 3.4e-47 192.2 174 56.3
Ciclev10007418m.g Citrus clementina HOM05D006378 ORTHO05D007959 5.8e-47 191.4 174 55.2
Duzib168G0703 Durio zibethinus HOM05D006378 ORTHO05D007959 5.8e-47 191.4 169 57.4
TWI34G0472 Tripterygium wilfordii HOM05D006378 ORTHO05D007959 5.8e-47 191.4 171 58.5
SGA_v2.0_scaffold91G28112 Striga asiatica HOM05D006378 ORTHO05D007959 1.7e-46 189.9 169 52.7
Ca_02206_v3 Cicer arietinum L. HOM05D006378 ORTHO05D007959 2.2e-46 189.5 173 54.9
Cc06_g12180 Coffea canephora HOM05D006378 ORTHO05D007959 2.2e-46 189.5 174 56.3
Nitab4.5_0000343g0150 Nicotiana tabacum HOM05D006378 ORTHO05D007959 2.9e-46 189.1 174 55.2
Peaxi162Scf00127g01816 Petunia axillaris HOM05D006378 ORTHO05D007959 3.8e-46 188.7 169 57.4
Hund08780 Selenicereus undatus HOM05D006378 ORTHO05D007959 3.8e-46 188.7 174 54.0
HPP92_002164 Vanilla planifolia HOM05D006378 ORTHO05D007959 4.9e-46 188.3 175 58.3
VMungo1309G1044 Vigna mungo HOM05D006378 ORTHO05D007959 6.4e-46 188.0 169 56.8
ECA236G3597 Erigeron canadensis HOM05D006378 ORTHO05D007959 1.1e-45 187.2 172 54.7
Lalb_Chr08g0232591 Lupinus albus HOM05D006378 ORTHO05D007959 1.1e-45 187.2 171 51.5
Os03g0179000 Oryza sativa ssp. japonica HOM05D006378 ORTHO05D007959 1.1e-45 187.2 173 56.1
Psat1g134280 Pisum sativum HOM05D006378 ORTHO05D007959 1.1e-45 187.2 173 53.2
PGR044G1219 Punica granatum HOM05D006378 ORTHO05D007959 1.9e-45 186.4 176 54.0
Prupe.7G198800 Prunus persica HOM05D006378 ORTHO05D007959 3.2e-45 185.7 172 54.1
Medtr2g041640 Medicago truncatula HOM05D006378 ORTHO05D007959 4.2e-45 185.3 171 53.2
EL10Ac8g19061 Beta vulgaris HOM05D006378 ORTHO05D007959 7.1e-45 184.5 171 56.1
QL11p000773 Quercus lobata HOM05D006378 ORTHO05D007959 7.1e-45 184.5 176 55.1
CsaV3_1G041050 Cucumis sativus L. HOM05D006378 ORTHO05D007959 1.2e-44 183.7 178 53.4
Nitab4.5_0009436g0010 Nicotiana tabacum HOM05D006378 ORTHO05D007959 1.2e-44 183.7 174 54.6
Ah.09g231620 Amaranthus hybridus HOM05D006378 ORTHO05D007959 1.6e-44 183.3 174 53.4
Lj6g0025012 Lotus japonicus HOM05D006378 ORTHO05D007959 1.6e-44 183.3 169 56.2
unitig_578.g15677 Utricularia gibba HOM05D006378 ORTHO05D007959 1.6e-44 183.3 167 55.1
Cpa.g.sc28.38 Carica papaya HOM05D006378 ORTHO05D007959 2.1e-44 183.0 172 52.3
MD15G1217600 Malus domestica HOM05D006378 ORTHO05D007959 2.1e-44 183.0 172 54.1
Haze_26013 Corylus avellana HOM05D006378 ORTHO05D007959 2.7e-44 182.6 168 55.4
Cfa002988 Carpinus fangiana HOM05D006378 ORTHO05D007959 3.5e-44 182.2 170 55.9
MELO3C015521.2 Cucumis melo HOM05D006378 ORTHO05D007959 3.5e-44 182.2 174 54.0
Gorai.010G088400 Gossypium raimondii HOM05D006378 ORTHO05D007959 3.5e-44 182.2 169 53.8
THA.LOC104826591 Tarenaya hassleriana HOM05D006378 ORTHO05D007959 4.6e-44 181.8 171 55.0
Gohir.A06G076500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 7.9e-44 181.0 169 54.4
CiPaw.03G206400 Carya illinoinensis HOM05D006378 ORTHO05D007959 1.8e-43 179.9 177 53.7
Gohir.D06G075500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 1.8e-43 179.9 169 53.3
Eucgr.C03329 Eucalyptus grandis HOM05D006378 ORTHO05D007959 2.3e-43 179.5 178 56.2
Zm00001eb401890 Zea mays HOM05D006378 ORTHO05D007959 2.3e-43 179.5 170 52.9
COL.COLO4_18097 Corchorus olitorius HOM05D006378 ORTHO05D007959 3.0e-43 179.1 168 54.2
arahy.Tifrunner.gnm1.ann1.CBKZ0V Arachis hypogaea HOM05D006378 ORTHO05D007959 5.1e-43 178.3 169 52.7
Sed0026053 Sechium edule HOM05D006378 ORTHO05D007959 1.1e-42 177.2 176 51.7
arahy.Tifrunner.gnm1.ann1.LZ43MP Arachis hypogaea HOM05D006378 ORTHO05D007959 1.9e-42 176.4 169 52.7
Phvul.009G227300 Phaseolus vulgaris HOM05D006378 ORTHO05D007959 3.3e-42 175.6 169 53.8
Eucgr.C03264 Eucalyptus grandis HOM05D006378 ORTHO05D007959 7.4e-42 174.5 176 54.5
Glyma.15G177600 Glycine max HOM05D006378 ORTHO05D007959 9.6e-42 174.1 169 52.1
FAN28G1488 Fragaria x ananassa HOM05D006378 ORTHO05D007959 1.4e-40 170.2 171 52.0
RcHm_v2.0_Chr2g0094931 Rosa chinensis HOM05D006378 ORTHO05D007959 2.4e-40 169.5 169 52.1
FAN26G1418 Fragaria x ananassa HOM05D006378 ORTHO05D007959 5.3e-40 168.3 171 51.5
Carub.0002s2445 Capsella rubella HOM05D006378 ORTHO05D007959 6.9e-40 167.9 171 50.3
AT1G77550 Arabidopsis thaliana HOM05D006378 ORTHO05D007959 9.0e-40 167.5 171 50.3
FAN19G1878 Fragaria x ananassa HOM05D006378 ORTHO05D007959 9.0e-40 167.5 171 51.5
Thhalv10003638m.g Eutrema salsugineum HOM05D006378 ORTHO05D007959 1.5e-39 166.8 173 48.6
Sp7g06720 Schrenkiella parvula HOM05D006378 ORTHO05D007959 1.5e-39 166.8 170 49.4
FAN26G3001 Fragaria x ananassa HOM05D006378 ORTHO05D007959 2.6e-39 166.0 171 50.9
BcaB06g26949 Brassica carinata HOM05D006378 ORTHO05D007959 7.6e-39 164.5 169 49.7
BcaC02g09569 Brassica carinata HOM05D006378 ORTHO05D007959 1.3e-38 163.7 169 49.1
C04p44250 Brassica napus HOM05D006378 ORTHO05D007959 1.3e-38 163.7 169 49.1
BolC4t25998H Brassica oleracea HOM05D006378 ORTHO05D007959 1.3e-38 163.7 169 49.1
AL2G37770 Arabidopsis lyrata HOM05D006378 ORTHO05D007959 2.9e-38 162.5 171 49.1
AagrBONN_evm.TU.Sc2ySwM_117.2900 Anthoceros agrestis HOM05D006378 ORTHO05D007959 6.5e-38 161.4 171 50.9
BraA04t16723Z Brassica rapa HOM05D006378 ORTHO05D007959 4.2e-37 158.7 170 47.6
A04p10600 Brassica napus HOM05D006378 ORTHO05D007959 7.1e-37 157.9 170 47.6
Aa31LG2G20840 Aethionema arabicum HOM05D006378 ORTHO05D007959 1.2e-36 157.1 168 47.6
Pp3c6_19960 Physcomitrium patens HOM05D006378 ORTHO05D007959 1.8e-35 153.3 169 46.7
Mapoly0113s0055 Marchantia polymorpha HOM05D006378 ORTHO05D007959 3.3e-34 149.1 174 47.7
CAN.G62.5 Capsicum annuum HOM05D006378 ORTHO05D007959 3.7e-33 145.6 135 56.3
SMO174G0008 Selaginella moellendorffii HOM05D006378 ORTHO05D007959 6.3e-33 144.8 167 49.1
Actinidia29932 Actinidia chinensis HOM05D006378 ORTHO05D007959 2.1e-28 129.8 112 58.0
ATR0598G254 Amborella trichopoda HOM05D006378 ORTHO05D007959 5.1e-27 125.2 91 62.6
SHI02339 Sapria himalayana HOM05D006378 ORTHO05D007959 7.4e-10 68.2 89 42.7
ATR0511G001 Amborella trichopoda HOM05D006378 ORTHO05D007959 3.1e-08 62.8 84 46.4
SEGI_03485 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 9.1e-08 61.2 79 45.6
CAN.G81.12 Capsicum annuum HOM05D006378 ORTHO05D007959 3.5e-07 59.3 79 44.3


User provided reference genes

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