Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1535 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 2.6e-217 758.4 386 100.0
CDE05G0540 Ceratophyllum demersum HOM05D003379 ORTHO05D003862 1.1e-186 656.8 386 87.6
TAR475G0001 Trochodendron aralioides HOM05D003379 ORTHO05D003862 3.6e-78 296.2 438 45.2
TAR374G0325 Trochodendron aralioides HOM05D003379 ORTHO05D003862 1.1e-66 258.1 439 40.8
MBI07_g41898_MAGBIO Magnolia biondii HOM05D003379 ORTHO05D003862 3.2e-66 256.5 443 40.4
PGR142G1656 Punica granatum HOM05D003379 ORTHO05D003862 4.3e-63 246.1 433 40.9
Dinv19304 Davidia involucrata HOM05D003379 ORTHO05D003862 1.0e-59 235.0 444 38.1
Manes.11G076800 Manihot esculenta HOM05D003379 ORTHO05D003862 2.5e-58 230.3 446 39.7
CiPaw.06G109000 Carya illinoinensis HOM05D003379 ORTHO05D003862 2.7e-57 226.9 433 37.6
Dinv01473 Davidia involucrata HOM05D003379 ORTHO05D003862 3.5e-57 226.5 434 38.0
MELO3C014781.2 Cucumis melo HOM05D003379 ORTHO05D003862 1.3e-56 224.6 433 37.9
Potri.003G163100 Populus trichocarpa HOM05D003379 ORTHO05D003862 3.9e-56 223.0 448 37.7
Sabra02G0181500 Salix brachista HOM05D003379 ORTHO05D003862 5.1e-56 222.6 438 39.3
Dinv25618 Davidia involucrata HOM05D003379 ORTHO05D003862 1.1e-55 221.5 449 37.0
Nn4g22138 Nelumbo nucifera HOM05D003379 ORTHO05D003862 4.3e-55 219.5 421 37.8
Potri.002G238100 Populus trichocarpa HOM05D003379 ORTHO05D003862 4.3e-55 219.5 438 39.3
Haze_12496 Corylus avellana HOM05D003379 ORTHO05D003862 7.4e-55 218.8 424 36.1
Sabra03G0118600 Salix brachista HOM05D003379 ORTHO05D003862 1.3e-54 218.0 441 37.9
CsaV3_3G027780 Cucumis sativus L. HOM05D003379 ORTHO05D003862 4.1e-53 213.0 432 37.3
vmacro18379 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 9.0e-53 211.8 446 37.0
Potri.014G143800 Populus trichocarpa HOM05D003379 ORTHO05D003862 2.0e-52 210.7 445 36.9
QL03p049546 Quercus lobata HOM05D003379 ORTHO05D003862 2.0e-52 210.7 425 36.7
Atru.chr12.1405 Acer truncatum HOM05D003379 ORTHO05D003862 5.9e-52 209.1 441 37.0
Actinidia36245 Actinidia chinensis HOM05D003379 ORTHO05D003862 7.7e-52 208.8 433 36.7
Sed0021165 Sechium edule HOM05D003379 ORTHO05D003862 1.0e-51 208.4 446 37.7
Sed0002814 Sechium edule HOM05D003379 ORTHO05D003862 1.3e-51 208.0 435 38.2
ClCG05G012630 Citrullus lanatus HOM05D003379 ORTHO05D003862 8.5e-51 205.3 438 36.3
Ciclev10015333m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.1e-50 204.9 432 37.3
Aqoxy6G00186 Aquilegia oxysepala HOM05D003379 ORTHO05D003862 1.9e-50 204.1 439 36.4
Rhsim08G0039200 Rhododendron simsii HOM05D003379 ORTHO05D003862 1.9e-50 204.1 451 35.9
Haze_14949 Corylus avellana HOM05D003379 ORTHO05D003862 1.6e-49 201.1 444 35.8
QL02p069539 Quercus lobata HOM05D003379 ORTHO05D003862 1.6e-49 201.1 444 35.4
Atru.chr6.2693 Acer truncatum HOM05D003379 ORTHO05D003862 2.7e-49 200.3 426 36.9
Cpa.g.sc70.68 Carica papaya HOM05D003379 ORTHO05D003862 2.7e-49 200.3 446 35.4
Duzib132G1102 Durio zibethinus HOM05D003379 ORTHO05D003862 2.7e-49 200.3 431 35.3
COL.COLO4_13374 Corchorus olitorius HOM05D003379 ORTHO05D003862 6.1e-49 199.1 450 36.4
TWI75G1860 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 6.1e-49 199.1 443 34.3
TWI32G0366 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 7.9e-49 198.7 423 37.8
Actinidia30590 Actinidia chinensis HOM05D003379 ORTHO05D003862 1.8e-48 197.6 421 37.1
Sc17g0006750 Simmondsia chinensis HOM05D003379 ORTHO05D003862 1.8e-48 197.6 435 35.2
Rhsim12G0017700 Rhododendron simsii HOM05D003379 ORTHO05D003862 3.9e-48 196.4 438 35.4
Sc03g0005220 Simmondsia chinensis HOM05D003379 ORTHO05D003862 3.9e-48 196.4 414 37.4
MD17G1006900 Malus domestica HOM05D003379 ORTHO05D003862 6.7e-48 195.7 432 36.6
Cfa007165 Carpinus fangiana HOM05D003379 ORTHO05D003862 8.8e-48 195.3 442 36.2
Thecc.04G047800 Theobroma cacao HOM05D003379 ORTHO05D003862 1.9e-47 194.1 450 36.4
Eucgr.I02446 Eucalyptus grandis HOM05D003379 ORTHO05D003862 2.5e-47 193.7 465 36.8
MD09G1002700 Malus domestica HOM05D003379 ORTHO05D003862 3.3e-47 193.4 437 37.1
Actinidia22119 Actinidia chinensis HOM05D003379 ORTHO05D003862 5.7e-47 192.6 425 36.2
Ciclev10005064m.g Citrus clementina HOM05D003379 ORTHO05D003862 1.3e-46 191.4 422 34.6
ATR0582G197 Amborella trichopoda HOM05D003379 ORTHO05D003862 2.2e-46 190.7 445 35.7
Lj7A617T72 Lonicera japonica HOM05D003379 ORTHO05D003862 2.8e-46 190.3 442 35.1
CiPaw.04G001500 Carya illinoinensis HOM05D003379 ORTHO05D003862 3.7e-46 189.9 427 37.9
Prupe.3G313500 Prunus persica HOM05D003379 ORTHO05D003862 4.8e-46 189.5 444 35.8
Cfa009444 Carpinus fangiana HOM05D003379 ORTHO05D003862 6.3e-46 189.1 540 30.6
Duzib187G1855 Durio zibethinus HOM05D003379 ORTHO05D003862 6.3e-46 189.1 445 35.5
Manes.08G101800 Manihot esculenta HOM05D003379 ORTHO05D003862 6.3e-46 189.1 434 35.9
FAN09G0861 Fragaria x ananassa HOM05D003379 ORTHO05D003862 8.2e-46 188.7 425 35.1
FAN14G1380 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.4e-45 187.2 423 34.8
Cc07_g01280 Coffea canephora HOM05D003379 ORTHO05D003862 4.1e-45 186.4 488 34.4
VMungo1383G3656 Vigna mungo HOM05D003379 ORTHO05D003862 5.3e-45 186.0 419 37.2
Migut.E00693 Erythranthe guttata HOM05D003379 ORTHO05D003862 6.9e-45 185.7 431 37.6
Phvul.001G084300 Phaseolus vulgaris HOM05D003379 ORTHO05D003862 6.9e-45 185.7 415 37.1
FvH4_6g54290 Fragaria vesca HOM05D003379 ORTHO05D003862 9.1e-45 185.3 427 34.7
Prupe.1G216200 Prunus persica HOM05D003379 ORTHO05D003862 9.1e-45 185.3 429 35.0
PSO017G0829 Papaver somniferum HOM05D003379 ORTHO05D003862 1.2e-44 184.9 441 34.0
FAN05G5138 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.0e-44 184.1 422 35.1
Hma1.2p1_0787F.1_g217850 Hydrangea macrophylla HOM05D003379 ORTHO05D003862 2.0e-44 184.1 459 35.3
Gohir.A07G232700 Gossypium hirsutum HOM05D003379 ORTHO05D003862 4.5e-44 183.0 452 34.5
Gohir.D07G239900 Gossypium hirsutum HOM05D003379 ORTHO05D003862 4.5e-44 183.0 461 34.5
THA.LOC104825281 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 1.0e-43 181.8 433 33.7
FAN07G0868 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.3e-43 181.4 419 32.9
HanXRQChr12g0384731 Helianthus annuus HOM05D003379 ORTHO05D003862 1.7e-43 181.0 392 36.5
Ah.09g236390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 3.8e-43 179.9 435 34.9
Gorai.001G276100 Gossypium raimondii HOM05D003379 ORTHO05D003862 3.8e-43 179.9 459 34.4
PSO478G4908 Papaver somniferum HOM05D003379 ORTHO05D003862 3.8e-43 179.9 442 34.4
MSTRG.2062 Avicennia marina HOM05D003379 ORTHO05D003862 5.0e-43 179.5 443 34.5
Hund23589 Selenicereus undatus HOM05D003379 ORTHO05D003862 5.0e-43 179.5 443 33.4
Nitab4.5_0005424g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 6.5e-43 179.1 414 36.0
RcHm_v2.0_Chr4g0428951 Rosa chinensis HOM05D003379 ORTHO05D003862 6.5e-43 179.1 421 32.3
FAN12G1414 Fragaria x ananassa HOM05D003379 ORTHO05D003862 8.5e-43 178.7 413 33.7
SGA_v2.0_scaffold306G48013 Striga asiatica HOM05D003379 ORTHO05D003862 1.4e-42 177.9 445 33.5
FvH4_4g22730 Fragaria vesca HOM05D003379 ORTHO05D003862 2.5e-42 177.2 413 33.4
Peaxi162Scf00171g00621 Petunia axillaris HOM05D003379 ORTHO05D003862 2.5e-42 177.2 423 35.9
CAN.G7.8 Capsicum annuum HOM05D003379 ORTHO05D003862 3.2e-42 176.8 423 36.4
Lalb_Chr14g0364121 Lupinus albus HOM05D003379 ORTHO05D003862 3.2e-42 176.8 429 34.3
Oeu027918.1 Olea europaea HOM05D003379 ORTHO05D003862 4.2e-42 176.4 410 35.4
Thecc.02G193300 Theobroma cacao HOM05D003379 ORTHO05D003862 5.5e-42 176.0 432 34.5
EL10Ac8g20553 Beta vulgaris HOM05D003379 ORTHO05D003862 9.4e-42 175.3 429 35.2
FAN17G1075 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.2e-41 174.9 419 32.7
COL.COLO4_21771 Corchorus olitorius HOM05D003379 ORTHO05D003862 1.6e-41 174.5 433 31.9
DCAR_002970 Daucus carota HOM05D003379 ORTHO05D003862 3.6e-41 173.3 438 34.5
Sp6g30030 Schrenkiella parvula HOM05D003379 ORTHO05D003862 4.7e-41 172.9 428 36.0
Nitab4.5_0002116g0010 Nicotiana tabacum HOM05D003379 ORTHO05D003862 6.1e-41 172.6 422 34.4
CSS0045312 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 7.9e-41 172.2 371 34.5
Sopen04g017060 Solanum pennellii HOM05D003379 ORTHO05D003862 7.9e-41 172.2 421 35.6
Ca_08145_v3 Cicer arietinum L. HOM05D003379 ORTHO05D003862 1.0e-40 171.8 419 32.5
Sopen02g036510 Solanum pennellii HOM05D003379 ORTHO05D003862 1.4e-40 171.4 397 36.0
Gorai.005G196800 Gossypium raimondii HOM05D003379 ORTHO05D003862 3.0e-40 170.2 436 32.8
AUR62014693 Chenopodium quinoa HOM05D003379 ORTHO05D003862 5.1e-40 169.5 418 34.7
Gohir.D02G175200 Gossypium hirsutum HOM05D003379 ORTHO05D003862 5.1e-40 169.5 442 33.5
Solyc02g091940.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 5.1e-40 169.5 394 35.5
EL10Ac6g13403 Beta vulgaris HOM05D003379 ORTHO05D003862 6.7e-40 169.1 481 32.0
CANSAT64G2275 Cannabis sativa HOM05D003379 ORTHO05D003862 6.7e-40 169.1 417 36.2
Ah.03g136390 Amaranthus hybridus HOM05D003379 ORTHO05D003862 8.8e-40 168.7 470 30.9
Solyc04g024520.3 Solanum lycopersicum HOM05D003379 ORTHO05D003862 1.1e-39 168.3 421 35.2
Medtr7g084070 Medicago truncatula HOM05D003379 ORTHO05D003862 2.6e-39 167.2 421 34.9
Thhalv10013725m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 4.4e-39 166.4 429 34.3
THA.LOC104825464 Tarenaya hassleriana HOM05D003379 ORTHO05D003862 5.7e-39 166.0 434 33.9
Nitab4.5_0001409g0240 Nicotiana tabacum HOM05D000225 ORTHO05D001595 7.4e-39 165.6 399 33.8
PGSC0003DMG400004243 Solanum tuberosum HOM05D003379 ORTHO05D003862 9.7e-39 165.2 418 35.4
C09p63160 Brassica napus HOM05D003379 ORTHO05D003862 1.3e-38 164.9 423 33.8
Hund04187 Selenicereus undatus HOM05D003379 ORTHO05D003862 1.3e-38 164.9 464 34.1
Lsat_1_v5_gn_0_41321 Lactuca sativa HOM05D003379 ORTHO05D003862 2.8e-38 163.7 416 33.4
BolC9t59151H Brassica oleracea HOM05D003379 ORTHO05D003862 3.7e-38 163.3 423 33.8
TWI36G1473 Tripterygium wilfordii HOM05D003379 ORTHO05D003862 4.8e-38 162.9 443 32.5
AUR62037825 Chenopodium quinoa HOM05D003379 ORTHO05D003862 2.4e-37 160.6 354 35.3
Carub.0006s1216 Capsella rubella HOM05D003379 ORTHO05D003862 3.1e-37 160.2 432 34.3
Duzib147G0361 Durio zibethinus HOM05D003379 ORTHO05D003862 7.0e-37 159.1 367 36.8
Nitab4.5_0007209g0030 Nicotiana tabacum HOM05D000225 ORTHO05D001595 7.0e-37 159.1 375 33.6
Aa31LG11G15410 Aethionema arabicum HOM05D003379 ORTHO05D003862 1.5e-36 157.9 432 31.9
AUR62017428 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.5e-36 157.9 356 36.2
arahy.Tifrunner.gnm1.ann1.JRYW6U Arachis hypogaea HOM05D003379 ORTHO05D003862 2.0e-36 157.5 455 33.0
Aa31LG3G14350 Aethionema arabicum HOM05D003379 ORTHO05D003862 3.5e-36 156.8 438 33.1
Glyma.16G047900 Glycine max HOM05D003379 ORTHO05D003862 3.5e-36 156.8 422 34.4
Glyma.19G103400 Glycine max HOM05D003379 ORTHO05D003862 7.7e-36 155.6 426 33.1
Manes.09G187602 Manihot esculenta HOM05D003379 ORTHO05D003862 1.0e-35 155.2 407 32.7
Lj1g0011786 Lotus japonicus HOM05D003379 ORTHO05D003862 1.3e-35 154.8 442 31.2
A10p24430 Brassica napus HOM05D003379 ORTHO05D003862 1.7e-35 154.5 420 33.3
Psat3g093320 Pisum sativum HOM05D003379 ORTHO05D003862 2.2e-35 154.1 423 31.4
HPP92_027984 Vanilla planifolia HOM05D003379 ORTHO05D003862 2.2e-35 154.1 355 34.4
BraA10t44509Z Brassica rapa HOM05D003379 ORTHO05D003862 2.9e-35 153.7 419 32.9
PGSC0003DMG400021424 Solanum tuberosum HOM05D003379 ORTHO05D003862 3.8e-35 153.3 398 33.4
CSS0041611 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.4e-34 151.4 460 32.0
arahy.Tifrunner.gnm1.ann1.M1DIX9 Arachis hypogaea HOM05D003379 ORTHO05D003862 7.2e-34 149.1 445 31.2
Thhalv10013755m.g Eutrema salsugineum HOM05D003379 ORTHO05D003862 1.2e-33 148.3 428 32.0
GSVIVG01001080001 Vitis vinifera HOM05D003379 ORTHO05D003862 2.7e-33 147.1 404 32.9
Zm00001eb084870 Zea mays HOM05D003379 ORTHO05D003862 3.6e-33 146.7 440 30.2
AT5G13970 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 4.7e-33 146.4 437 32.7
Carub.0006s1148 Capsella rubella HOM05D003379 ORTHO05D003862 1.8e-32 144.4 436 32.3
MD13G1129900 Malus domestica HOM05D003379 ORTHO05D003862 2.3e-32 144.1 412 31.6
AL6G24630 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 1.1e-31 141.7 435 32.2
SalBow6G5409 Salvia bowleyana HOM05D003379 ORTHO05D003862 2.6e-31 140.6 311 37.9
Zm00001eb421370 Zea mays HOM05D003379 ORTHO05D003862 1.3e-30 138.3 322 33.5
AUR62012502 Chenopodium quinoa HOM05D003379 ORTHO05D003862 1.7e-30 137.9 299 36.8
CAN.G1061.1 Capsicum annuum HOM05D003379 ORTHO05D003862 4.8e-30 136.3 388 31.4
Gohir.A03G152100 Gossypium hirsutum HOM05D003379 ORTHO05D003862 4.8e-30 136.3 423 29.1
ECA234G2936 Erigeron canadensis HOM05D003379 ORTHO05D003862 6.3e-30 136.0 389 32.1
C09p63750 Brassica napus HOM05D003379 ORTHO05D003862 1.1e-29 135.2 351 32.5
AL6G23930 Arabidopsis lyrata HOM05D003379 ORTHO05D003862 2.4e-29 134.0 422 31.8
BcaC04g19123 Brassica carinata HOM05D003379 ORTHO05D003862 3.1e-29 133.7 425 31.8
vmacro01023 Vaccinium macrocarpon HOM05D003379 ORTHO05D003862 1.2e-28 131.7 438 31.5
BraA10t44552Z Brassica rapa HOM05D003379 ORTHO05D003862 3.5e-28 130.2 358 33.8
AT5G13310 Arabidopsis thaliana HOM05D003379 ORTHO05D003862 4.5e-28 129.8 423 31.4
CARHR200130 Cardamine hirsuta HOM05D003379 ORTHO05D003862 5.9e-28 129.4 427 32.1
Lsat_1_v5_gn_4_1521 Lactuca sativa HOM05D003379 ORTHO05D003862 2.2e-27 127.5 295 36.3
Lalb_Chr22g0359971 Lupinus albus HOM05D003379 ORTHO05D003862 2.9e-27 127.1 427 30.4
Sp6g30680 Schrenkiella parvula HOM05D003379 ORTHO05D003862 3.8e-27 126.7 419 29.8
A10p24890 Brassica napus HOM05D003379 ORTHO05D003862 2.7e-25 120.6 355 33.5
HanXRQChr17g0550921 Helianthus annuus HOM05D003379 ORTHO05D003862 4.7e-25 119.8 210 39.0
CARHR199420 Cardamine hirsuta HOM05D003379 ORTHO05D003862 6.1e-25 119.4 273 36.6
unitig_22.g5626 Utricularia gibba HOM05D003379 ORTHO05D003862 5.3e-21 106.3 397 31.2
HPP92_006450 Vanilla planifolia HOM05D003379 ORTHO05D003862 7.7e-20 102.4 249 34.1
ECA246G3772 Erigeron canadensis HOM05D003379 ORTHO05D003862 2.5e-18 97.4 426 27.7
RcHm_v2.0_Chr3g0475791 Rosa chinensis HOM05D003379 ORTHO05D003862 5.5e-18 96.3 301 30.6
CSS0018885 Camellia sinensis var. sinensis HOM05D003379 ORTHO05D003862 1.2e-17 95.1 280 30.7
SMO117G0242 Selaginella moellendorffii HOM05D002493 ORTHO05D003175 6.1e-17 92.8 407 28.0
BcaNung03374 Brassica carinata HOM05D003379 ORTHO05D003862 6.8e-16 89.4 188 36.2
Lj6P837T11 Lonicera japonica HOM05D003379 ORTHO05D003862 1.3e-14 85.1 181 36.5
FAN05G5404 Fragaria x ananassa HOM05D003379 ORTHO05D003862 1.1e-13 82.0 305 28.9
Pp3c5_23700 Physcomitrium patens HOM05D003379 ORTHO05D003862 4.1e-13 80.1 373 27.9
FvH4_6g20211 Fragaria vesca HOM05D003379 ORTHO05D003862 2.7e-12 77.4 405 25.9
BcaC04g20129 Brassica carinata HOM05D003379 ORTHO05D003862 3.8e-11 73.6 184 31.5
Ah.14g088790 Amaranthus hybridus HOM05D003379 ORTHO05D003862 8.6e-11 72.4 176 35.8
Mapoly0001s0546 Marchantia polymorpha HOM05D003379 ORTHO05D003862 8.6e-11 72.4 303 28.4
FAN05G4320 Fragaria x ananassa HOM05D003379 ORTHO05D003862 2.8e-09 67.4 143 36.4
AagrBONN_evm.TU.Sc2ySwM_369.605 Anthoceros agrestis HOM05D003379 ORTHO05D003862 4.7e-09 66.6 248 29.8
BolC7t42848H Brassica oleracea HOM05D003379 ORTHO05D003862 2.6e-07 60.8 197 28.4
BcaC01g02664 Brassica carinata HOM05D003379 ORTHO05D003862 1.3e-06 58.5 73 45.2
C07p23110 Brassica napus HOM05D003379 ORTHO05D003862 4.9e-06 56.6 238 27.7
BolC3t18480H Brassica oleracea HOM05D003379 ORTHO05D003862 4.9e-06 56.6 73 43.8
BraA05t20213Z Brassica rapa HOM05D003379 ORTHO05D003862 8.3e-06 55.8 73 46.6


User provided reference genes

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