Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1532 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 2.1e-109 399.1 199 100.0
CDE11G0224 Ceratophyllum demersum HOM05D006092 ORTHO05D007508 1.0e-100 370.2 232 82.3
Nn1g07635 Nelumbo nucifera HOM05D006092 ORTHO05D007508 3.4e-64 248.8 170 74.7
MBI15_g47946_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 5.1e-60 235.0 165 71.5
ATR0751G135 Amborella trichopoda HOM05D006092 ORTHO05D007508 2.8e-58 229.2 167 69.5
MBI15_g47073_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 4.5e-56 221.9 190 61.1
Atru.chr2.3894 Acer truncatum HOM05D006092 ORTHO05D007508 1.2e-53 213.8 163 68.1
Lj3g0000125 Lotus japonicus HOM05D006092 ORTHO05D007508 1.6e-53 213.4 166 68.7
MD03G1042800 Malus domestica HOM05D006092 ORTHO05D007508 3.6e-53 212.2 166 66.3
CARHR045350 Cardamine hirsuta HOM05D006092 ORTHO05D007508 4.7e-53 211.8 163 68.1
Nitab4.5_0001622g0160 Nicotiana tabacum HOM05D006092 ORTHO05D007508 1.4e-52 210.3 165 69.1
Prupe.6G035200 Prunus persica HOM05D006092 ORTHO05D007508 1.8e-52 209.9 164 68.3
Aa31LG10G560 Aethionema arabicum HOM05D006092 ORTHO05D007508 2.3e-52 209.5 164 68.9
Nitab4.5_0000611g0120 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.0e-52 209.1 165 67.9
AL1G63740 Arabidopsis lyrata HOM05D006092 ORTHO05D007508 3.9e-52 208.8 163 67.5
MBI14_g12737_MAGBIO Magnolia biondii HOM05D006092 ORTHO05D007508 3.9e-52 208.8 166 66.3
Nitab4.5_0000611g0110 Nicotiana tabacum HOM05D006092 ORTHO05D007508 3.9e-52 208.8 165 67.9
THA.LOC104822703 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 5.2e-52 208.4 169 64.5
GSVIVG01014842001 Vitis vinifera HOM05D006092 ORTHO05D007508 6.7e-52 208.0 169 68.0
Psat5g231800 Pisum sativum HOM05D006092 ORTHO05D007508 8.8e-52 207.6 165 66.1
Migut.M01583 Erythranthe guttata HOM05D006092 ORTHO05D007508 1.1e-51 207.2 167 65.3
Thhalv10011835m.g Eutrema salsugineum HOM05D006092 ORTHO05D007508 1.5e-51 206.8 164 67.7
THA.LOC104810303 Tarenaya hassleriana HOM05D006092 ORTHO05D007508 1.5e-51 206.8 163 67.5
Lalb_Chr18g0048631 Lupinus albus HOM05D006092 ORTHO05D007508 2.0e-51 206.5 164 63.4
PSO063G2976 Papaver somniferum HOM05D006092 ORTHO05D007508 2.0e-51 206.5 168 66.7
PSO782G4285 Papaver somniferum HOM05D006092 ORTHO05D007508 2.0e-51 206.5 168 66.7
Aqoxy4G02265 Aquilegia oxysepala HOM05D006092 ORTHO05D007508 3.3e-51 205.7 170 63.5
AT1G55670 Arabidopsis thaliana HOM05D006092 ORTHO05D007508 3.3e-51 205.7 163 68.1
MELO3C014124.2 Cucumis melo HOM05D006092 ORTHO05D007508 3.3e-51 205.7 161 67.7
ClCG10G004510 Citrullus lanatus HOM05D006092 ORTHO05D007508 4.4e-51 205.3 161 68.3
CsaV3_3G004330 Cucumis sativus L. HOM05D006092 ORTHO05D007508 4.4e-51 205.3 161 67.7
RcHm_v2.0_Chr5g0074661 Rosa chinensis HOM05D006092 ORTHO05D007508 4.4e-51 205.3 162 67.9
TWI38G1372 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 4.4e-51 205.3 167 65.3
TWI39G1159 Tripterygium wilfordii HOM05D006092 ORTHO05D007508 4.4e-51 205.3 167 65.9
FAN25G2470 Fragaria x ananassa HOM05D006092 ORTHO05D007508 5.7e-51 204.9 162 67.3
TPR.G16714 Trifolium pratense HOM05D006092 ORTHO05D007508 7.4e-51 204.5 170 65.9
BcaB02g10807 Brassica carinata HOM05D006092 ORTHO05D007508 9.7e-51 204.1 163 66.9
A05p17350 Brassica napus HOM05D006092 ORTHO05D007508 1.3e-50 203.8 163 67.5
BraA05t20631Z Brassica rapa HOM05D006092 ORTHO05D007508 1.3e-50 203.8 163 67.5
BcaC08g44210 Brassica carinata HOM05D006092 ORTHO05D007508 2.2e-50 203.0 165 67.3
C06p16180 Brassica napus HOM05D006092 ORTHO05D007508 2.2e-50 203.0 165 67.3
BolC6t36815H Brassica oleracea HOM05D006092 ORTHO05D007508 2.2e-50 203.0 165 67.3
Cpa.g.sc12.69 Carica papaya HOM05D006092 ORTHO05D007508 2.2e-50 203.0 163 68.1
Ciclev10009769m.g Citrus clementina HOM05D006092 ORTHO05D007508 2.2e-50 203.0 163 67.5
FvH4_3g41620 Fragaria vesca HOM05D006092 ORTHO05D007508 2.2e-50 203.0 162 67.3
FAN11G0712 Fragaria x ananassa HOM05D006092 ORTHO05D007508 2.2e-50 203.0 162 67.3
Rhsim04G0007400 Rhododendron simsii HOM05D006092 ORTHO05D007508 2.2e-50 203.0 164 65.2
Glyma.04G112800 Glycine max HOM05D006092 ORTHO05D007508 2.8e-50 202.6 163 65.6
PGSC0003DMG400022249 Solanum tuberosum HOM05D006092 ORTHO05D007508 4.8e-50 201.8 165 66.7
Sopen07g034330 Solanum pennellii HOM05D006092 ORTHO05D007508 6.3e-50 201.4 165 66.7
Solyc07g066150.1 Solanum lycopersicum HOM05D006092 ORTHO05D007508 8.2e-50 201.1 165 66.7
BcaC01g01548 Brassica carinata HOM05D006092 ORTHO05D007508 1.1e-49 200.7 165 67.3
BolC3t21605H Brassica oleracea HOM05D006092 ORTHO05D007508 1.1e-49 200.7 165 67.3
ECA246G4981 Erigeron canadensis HOM05D006092 ORTHO05D007508 1.1e-49 200.7 165 66.1
HanXRQChr08g0232881 Helianthus annuus HOM05D006092 ORTHO05D007508 1.1e-49 200.7 140 75.7
C03p93010 Brassica napus HOM05D006092 ORTHO05D007508 1.4e-49 200.3 165 67.3
unitig_37.g11908 Utricularia gibba HOM05D006092 ORTHO05D007508 1.8e-49 199.9 165 64.8
Glyma.06G321900 Glycine max HOM05D006092 ORTHO05D007508 2.4e-49 199.5 153 66.7
Carub.0001s4419 Capsella rubella HOM05D006092 ORTHO05D007508 3.1e-49 199.1 163 66.3
A08p00380 Brassica napus HOM05D006092 ORTHO05D007508 4.1e-49 198.7 164 65.9
BraA08t32097Z Brassica rapa HOM05D006092 ORTHO05D007508 4.1e-49 198.7 164 65.9
unitig_92.g28271 Utricularia gibba HOM05D006092 ORTHO05D007508 5.3e-49 198.4 165 66.1
Thecc.07G001800 Theobroma cacao HOM05D006092 ORTHO05D007508 7.0e-49 198.0 163 65.6
BcaB04g16937 Brassica carinata HOM05D006092 ORTHO05D007508 9.1e-49 197.6 166 65.7
BcaC08g43644 Brassica carinata HOM05D006092 ORTHO05D007508 1.2e-48 197.2 164 66.5
C06p10630 Brassica napus HOM05D006092 ORTHO05D007508 1.2e-48 197.2 164 66.5
BolC6t36143H Brassica oleracea HOM05D006092 ORTHO05D007508 1.2e-48 197.2 164 66.5
Oeu013004.1 Olea europaea HOM05D006092 ORTHO05D007508 1.2e-48 197.2 168 64.3
BcaB07g33193 Brassica carinata HOM05D006092 ORTHO05D007508 1.6e-48 196.8 164 67.1
CAN.G623.73 Capsicum annuum HOM05D006092 ORTHO05D007508 1.6e-48 196.8 140 73.6
Cfa016959 Carpinus fangiana HOM05D006092 ORTHO05D007508 1.6e-48 196.8 165 64.8
HanXRQChr05g0160351 Helianthus annuus HOM05D006092 ORTHO05D007508 1.6e-48 196.8 142 73.2
Phvul.005G004000 Phaseolus vulgaris HOM05D006092 ORTHO05D007508 2.6e-48 196.1 168 63.1
Sed0026101 Sechium edule HOM05D006092 ORTHO05D007508 2.6e-48 196.1 162 65.4
Lsat_1_v5_gn_5_381 Lactuca sativa HOM05D006092 ORTHO05D007508 3.5e-48 195.7 139 75.5
Oeu006265.1 Olea europaea HOM05D006092 ORTHO05D007508 3.5e-48 195.7 169 65.1
Lj8P183T26 Lonicera japonica HOM05D006092 ORTHO05D007508 4.5e-48 195.3 102 90.2
VMungo1080G0991 Vigna mungo HOM05D006092 ORTHO05D007508 4.5e-48 195.3 166 63.3
Gohir.A04G001100 Gossypium hirsutum HOM05D006092 ORTHO05D007508 5.9e-48 194.9 171 60.8
QL08p000538 Quercus lobata HOM05D006092 ORTHO05D007508 5.9e-48 194.9 164 63.4
arahy.Tifrunner.gnm1.ann1.4PD0PP Arachis hypogaea HOM05D006092 ORTHO05D007508 1.0e-47 194.1 163 64.4
HPP92_022812 Vanilla planifolia HOM05D006092 ORTHO05D007508 1.0e-47 194.1 102 89.2
SalBow8G3834 Salvia bowleyana HOM05D006092 ORTHO05D007508 1.3e-47 193.7 168 66.1
A06p00060 Brassica napus HOM05D006092 ORTHO05D007508 1.7e-47 193.4 164 65.2
BraA06t23221Z Brassica rapa HOM05D006092 ORTHO05D007508 1.7e-47 193.4 164 65.2
Sabra16G0320400 Salix brachista HOM05D006092 ORTHO05D007508 1.7e-47 193.4 164 67.1
CANSAT11G0425 Cannabis sativa HOM05D006092 ORTHO05D007508 2.2e-47 193.0 143 69.2
Gorai.009G454900 Gossypium raimondii HOM05D006092 ORTHO05D007508 2.9e-47 192.6 165 60.6
Potri.001G471900 Populus trichocarpa HOM05D006092 ORTHO05D007508 2.9e-47 192.6 154 68.8
EL10Ac3g07451 Beta vulgaris HOM05D006092 ORTHO05D007508 5.0e-47 191.8 165 64.2
CARHR087970 Cardamine hirsuta HOM05D006092 ORTHO05D007508 8.5e-47 191.0 163 63.2
Haze_09914 Corylus avellana HOM05D006092 ORTHO05D007508 1.1e-46 190.7 164 64.0
Gorai.013G148000 Gossypium raimondii HOM05D006092 ORTHO05D007508 2.5e-46 189.5 180 59.4
Sc07g0002210 Simmondsia chinensis HOM05D006092 ORTHO05D007508 4.2e-46 188.7 166 62.7
Manes.01G006400 Manihot esculenta HOM05D006092 ORTHO05D007508 5.5e-46 188.3 155 63.9
Potri.011G168700 Populus trichocarpa HOM05D006092 ORTHO05D007508 9.4e-46 187.6 160 65.0
Sabra11G0138000 Salix brachista HOM05D006092 ORTHO05D007508 9.4e-46 187.6 154 66.9
Gohir.D13G132000 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.6e-45 186.8 170 62.4
PGR031G3987 Punica granatum HOM05D006092 ORTHO05D007508 2.1e-45 186.4 166 61.4
Ah.04g149440 Amaranthus hybridus HOM05D006092 ORTHO05D007508 3.6e-45 185.7 148 66.2
SGA_v2.0_scaffold186G40234 Striga asiatica HOM05D006092 ORTHO05D007508 3.6e-45 185.7 137 72.3
COL.COLO4_07787 Corchorus olitorius HOM05D006092 ORTHO05D007508 8.0e-45 184.5 103 86.4
AUR62018553 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.0e-44 184.1 103 85.4
AUR62020866 Chenopodium quinoa HOM05D006092 ORTHO05D007508 1.0e-44 184.1 103 85.4
Gohir.A13G128600 Gossypium hirsutum HOM05D006092 ORTHO05D007508 1.4e-44 183.7 170 61.8
Zm00001eb316290 Zea mays HOM05D006092 ORTHO05D007508 3.0e-44 182.6 122 73.0
Nitab4.5_0000611g0130 Nicotiana tabacum HOM05D006092 ORTHO05D007508 5.7e-43 178.3 157 61.8
Eucgr.F03646 Eucalyptus grandis HOM05D006092 ORTHO05D007508 7.5e-43 177.9 144 66.0
Sed0012341 Sechium edule HOM05D006092 ORTHO05D007508 1.3e-42 177.2 102 82.4
SEGI_13197 Sequoiadendron giganteum HOM05D006092 ORTHO05D007508 2.2e-42 176.4 138 65.2
Medtr3g010000 Medicago truncatula HOM05D006092 ORTHO05D007508 3.7e-42 175.6 164 59.1
Os09g0481200 Oryza sativa ssp. japonica HOM05D006092 ORTHO05D007508 3.1e-41 172.6 110 77.3
Zm00001eb101660 Zea mays HOM05D006092 ORTHO05D007508 1.2e-40 170.6 101 81.2
Pp3c15_5850 Physcomitrium patens HOM05D006092 ORTHO05D007508 6.8e-36 154.8 138 55.8
Dinv40914 Davidia involucrata HOM05D006092 ORTHO05D007508 5.7e-35 151.8 163 54.6
Pp3c9_15440 Physcomitrium patens HOM05D006092 ORTHO05D007508 5.7e-35 151.8 135 55.6
SMO353G0046 Selaginella moellendorffii HOM05D006092 ORTHO05D007508 2.2e-34 149.8 97 69.1
Sp1g41280 Schrenkiella parvula HOM05D006092 ORTHO05D007508 4.8e-34 148.7 163 54.0
CBR_g28070 Chara braunii HOM05D006092 ORTHO05D007508 2.4e-33 146.4 126 57.1
CiPaw.11G210500 Carya illinoinensis HOM05D006092 ORTHO05D007508 9.1e-33 144.4 161 50.9
Mapoly0038s0054 Marchantia polymorpha HOM05D006092 ORTHO05D007508 4.5e-32 142.1 119 60.5
AagrBONN_evm.TU.Sc2ySwM_228.5128 Anthoceros agrestis HOM05D006092 ORTHO05D007508 7.7e-32 141.4 111 62.2
TAR627G0509 Trochodendron aralioides HOM05D006092 ORTHO05D007508 1.6e-24 117.1 72 73.6
PRCOL_00006984 Prasinoderma coloniale HOM05D006092 ORTHO05D007508 6.1e-21 105.1 90 57.8
PGSC0003DMG400006702 Solanum tuberosum HOM05D006092 ORTHO05D007508 5.7e-19 98.6 131 46.6
EL10As5g23536 Beta vulgaris HOM05D006092 ORTHO05D007508 9.2e-17 91.3 55 81.8
MCO01G478 Micromonas commoda HOM05D006092 ORTHO05D007508 1.2e-16 90.9 86 52.3
EL10Ac3g06625 Beta vulgaris HOM05D006092 ORTHO05D007508 4.6e-16 89.0 53 83.0
EL10Ac5g10941 Beta vulgaris HOM05D006092 ORTHO05D007508 4.6e-16 89.0 53 83.0
Cre12.g560950 Chlamydomonas reinhardtii HOM05D006092 ORTHO05D007508 8.0e-13 78.2 102 42.2


User provided reference genes

Program Settings