Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1529 Ceratophyllum demersum HOM05D006991 ORTHO05D009188 0.0e+00 1324.3 643 100.0
GSVIVG01026850001 Vitis vinifera HOM05D006991 ORTHO05D009188 2.1e-256 889.0 639 67.3
TWI23G0867 Tripterygium wilfordii HOM05D006991 ORTHO05D009188 3.4e-254 881.7 642 66.8
Potri.002G157400 Populus trichocarpa HOM05D006991 ORTHO05D009188 2.4e-252 875.5 636 65.4
Nn6g33525 Nelumbo nucifera HOM05D006991 ORTHO05D009188 3.2e-252 875.2 646 64.9
QL08p049512 Quercus lobata HOM05D006991 ORTHO05D009188 6.6e-250 867.5 643 65.9
Prupe.2G164100 Prunus persica HOM05D006991 ORTHO05D009188 1.9e-249 865.9 642 65.3
Lj3g0006815 Lotus japonicus HOM05D006991 ORTHO05D009188 7.3e-249 864.0 644 64.1
TPR.G4402 Trifolium pratense HOM05D006991 ORTHO05D009188 2.1e-248 862.4 649 63.8
FAN03G2057 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.1e-247 860.1 647 64.8
Haze_15467 Corylus avellana HOM05D006991 ORTHO05D009188 1.8e-247 859.4 641 65.7
FvH4_7g13830 Fragaria vesca HOM05D006991 ORTHO05D009188 2.3e-247 859.0 647 64.8
PSO063G6634 Papaver somniferum HOM05D006991 ORTHO05D009188 4.0e-247 858.2 653 65.7
RcHm_v2.0_Chr1g0354041 Rosa chinensis HOM05D006991 ORTHO05D009188 5.2e-247 857.8 650 63.5
MD01G1054400 Malus domestica HOM05D006991 ORTHO05D009188 2.0e-246 855.9 635 65.7
Aqoxy5G03423_Aqoxy5G03424 Aquilegia oxysepala HOM05D006991 ORTHO05D009188 4.4e-246 854.7 641 65.1
Medtr8g031480 Medicago truncatula HOM05D006991 ORTHO05D009188 5.8e-246 854.4 641 63.7
Glyma.07G073500 Glycine max HOM05D006991 ORTHO05D009188 7.6e-246 854.0 645 64.0
Ciclev10019238m.g Citrus clementina HOM05D006991 ORTHO05D009188 9.9e-246 853.6 640 64.5
Dinv43786 Davidia involucrata HOM05D006991 ORTHO05D009188 3.2e-244 848.6 656 64.5
Lalb_Chr04g0256761 Lupinus albus HOM05D006991 ORTHO05D009188 4.6e-243 844.7 640 64.1
PGR042G0621 Punica granatum HOM05D006991 ORTHO05D009188 1.0e-242 843.6 637 62.3
Cc02_g37710 Coffea canephora HOM05D006991 ORTHO05D009188 3.0e-242 842.0 637 64.7
CANSAT56G3382 Cannabis sativa HOM05D006991 ORTHO05D009188 3.9e-242 841.6 639 63.7
FAN10G0464 Fragaria x ananassa HOM05D006991 ORTHO05D009188 6.6e-242 840.9 674 61.7
FAN06G2381 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.5e-241 839.0 685 60.9
Duzib138G0243 Durio zibethinus HOM05D006991 ORTHO05D009188 4.3e-241 838.2 647 64.0
HanXRQChr04g0121651 Helianthus annuus HOM05D006991 ORTHO05D009188 1.2e-240 836.6 641 63.7
Thecc.01G363100 Theobroma cacao HOM05D006991 ORTHO05D009188 6.2e-240 834.3 651 64.4
ATR0680G083 Amborella trichopoda HOM05D006991 ORTHO05D009188 1.4e-239 833.2 640 62.3
DCAR_015941 Daucus carota HOM05D006991 ORTHO05D009188 1.4e-239 833.2 650 62.6
Cfa003952 Carpinus fangiana HOM05D006991 ORTHO05D009188 1.5e-238 829.7 643 63.6
CSS0011179 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 4.4e-238 828.2 630 64.1
MSTRG.28216 Avicennia marina HOM05D006991 ORTHO05D009188 7.6e-238 827.4 645 61.9
VMungo0331G1855 Vigna mungo HOM05D006991 ORTHO05D009188 9.9e-238 827.0 640 63.0
FAN01G0340 Fragaria x ananassa HOM05D006991 ORTHO05D009188 1.7e-237 826.2 673 61.2
COL.COLO4_12678 Corchorus olitorius HOM05D006991 ORTHO05D009188 2.9e-237 825.5 650 62.8
FAN06G3007 Fragaria x ananassa HOM05D006991 ORTHO05D009188 2.9e-237 825.5 673 61.2
AUR62004323 Chenopodium quinoa HOM05D006991 ORTHO05D009188 6.4e-237 824.3 639 62.6
Rhsim07G0017800 Rhododendron simsii HOM05D006991 ORTHO05D009188 6.4e-237 824.3 636 63.5
Sed0028010 Sechium edule HOM05D006991 ORTHO05D009188 1.6e-235 819.7 651 62.7
Gorai.001G170100 Gossypium raimondii HOM05D006991 ORTHO05D009188 3.9e-234 815.1 641 62.9
ClCG05G001680 Citrullus lanatus HOM05D006991 ORTHO05D009188 8.7e-234 813.9 650 62.6
Lj9A581T68 Lonicera japonica HOM05D006991 ORTHO05D009188 8.7e-234 813.9 645 62.2
SGA_v2.0_scaffold43G16441 Striga asiatica HOM05D006991 ORTHO05D009188 8.7e-234 813.9 643 62.4
Gohir.D07G148700 Gossypium hirsutum HOM05D006991 ORTHO05D009188 1.1e-233 813.5 641 62.7
Atru.chr5.484 Acer truncatum HOM05D006991 ORTHO05D009188 1.5e-233 813.1 604 65.4
MELO3C006127.2 Cucumis melo HOM05D006991 ORTHO05D009188 5.6e-233 811.2 651 62.4
Eucgr.E00177 Eucalyptus grandis HOM05D006991 ORTHO05D009188 7.3e-233 810.8 657 60.4
Nitab4.5_0009210g0040 Nicotiana tabacum HOM05D006991 ORTHO05D009188 2.1e-232 809.3 646 61.8
Nitab4.5_0002160g0070 Nicotiana tabacum HOM05D006991 ORTHO05D009188 2.8e-232 808.9 642 62.1
CAN.G78.50 Capsicum annuum HOM05D006991 ORTHO05D009188 8.1e-232 807.4 641 61.2
Migut.N01431 Erythranthe guttata HOM05D006991 ORTHO05D009188 8.1e-232 807.4 640 59.8
Ah.05g176510 Amaranthus hybridus HOM05D006991 ORTHO05D009188 1.4e-231 806.6 638 61.1
THA.LOC104801448 Tarenaya hassleriana HOM05D006991 ORTHO05D009188 1.4e-231 806.6 645 61.9
BolC8t52898H Brassica oleracea HOM05D006991 ORTHO05D009188 3.1e-231 805.4 648 61.9
PGSC0003DMG400000156 Solanum tuberosum HOM05D006991 ORTHO05D009188 1.5e-230 803.1 639 61.7
ECA236G3544 Erigeron canadensis HOM05D006991 ORTHO05D009188 4.4e-230 801.6 637 61.5
Hund27298 Selenicereus undatus HOM05D006991 ORTHO05D002850 7.6e-230 800.8 641 62.2
Peaxi162Scf00020g00011 Petunia axillaris HOM05D006991 ORTHO05D009188 3.8e-229 798.5 663 59.6
Lsat_1_v5_gn_7_5201 Lactuca sativa HOM05D006991 ORTHO05D009188 1.4e-228 796.6 641 60.4
AT1G01770 Arabidopsis thaliana HOM05D006991 ORTHO05D009188 2.4e-228 795.8 638 61.6
CsaV3_3G009060 Cucumis sativus L. HOM05D006991 ORTHO05D009188 4.2e-228 795.0 646 61.6
Sc26g0001000 Simmondsia chinensis HOM05D006991 ORTHO05D009188 5.4e-228 794.7 644 60.1
SalBow5G3488 Salvia bowleyana HOM05D006991 ORTHO05D009188 7.1e-228 794.3 656 60.5
SalBow5G3803 Salvia bowleyana HOM05D006991 ORTHO05D009188 7.1e-228 794.3 656 60.5
Sopen01g038120 Solanum pennellii HOM05D006991 ORTHO05D009188 7.1e-228 794.3 639 60.9
Hma1.2p1_0001F.1_g001590 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.2e-227 793.5 646 61.0
BraA09t42261Z Brassica rapa HOM05D006991 ORTHO05D009188 1.6e-227 793.1 639 61.8
Os07g0457300 Oryza sativa ssp. japonica HOM05D006991 ORTHO05D009188 1.6e-227 793.1 641 60.4
CSS0000914 Camellia sinensis var. sinensis HOM05D006991 ORTHO05D009188 7.8e-227 790.8 631 61.6
AL1G10570 Arabidopsis lyrata HOM05D006991 ORTHO05D009188 5.1e-226 788.1 641 61.0
Sp1g00530 Schrenkiella parvula HOM05D006991 ORTHO05D009188 5.1e-226 788.1 640 60.3
Zm00001eb306550 Zea mays HOM05D006991 ORTHO05D009188 5.1e-226 788.1 651 59.6
C08p53830 Brassica napus HOM05D006991 ORTHO05D009188 8.7e-226 787.3 638 61.4
Thhalv10007047m.g Eutrema salsugineum HOM05D006991 ORTHO05D009188 1.5e-225 786.6 636 60.5
Carub.0001s0044 Capsella rubella HOM05D006991 ORTHO05D009188 3.3e-225 785.4 644 60.6
Aa31LG1G11140 Aethionema arabicum HOM05D006991 ORTHO05D009188 4.3e-225 785.0 641 60.8
HPP92_004979 Vanilla planifolia HOM05D006991 ORTHO05D009188 5.6e-225 784.6 643 60.0
Cpa.g.sc18.226 Carica papaya HOM05D006991 ORTHO05D009188 1.6e-224 783.1 656 60.2
vmacro13305 Vaccinium macrocarpon HOM05D006991 ORTHO05D009188 2.1e-224 782.7 683 58.7
Gohir.A07G142900 Gossypium hirsutum HOM05D006991 ORTHO05D009188 1.4e-223 780.0 642 60.6
Solyc01g094330.3 Solanum lycopersicum HOM05D006991 ORTHO05D009188 2.4e-223 779.2 663 59.3
Psat4g154080 Pisum sativum HOM05D006991 ORTHO05D009188 5.1e-218 761.5 591 62.3
EL10Ac1g00536 Beta vulgaris HOM05D006991 ORTHO05D009188 1.1e-204 717.2 635 57.0
unitig_748.g7107 Utricularia gibba HOM05D006991 ORTHO05D009188 2.1e-195 686.4 609 56.2
Hma1.2p1_0001F.1_g001600 Hydrangea macrophylla HOM05D006991 ORTHO05D009188 1.1e-193 680.6 495 65.5
arahy.Tifrunner.gnm1.ann1.NT7Z8Q Arachis hypogaea HOM05D006991 ORTHO05D009188 9.7e-193 677.6 640 54.4
CiPaw.02G028700 Carya illinoinensis HOM05D006991 ORTHO05D009188 8.5e-189 664.5 452 70.8
Pp3c9_2540 Physcomitrium patens HOM05D006991 ORTHO05D009188 5.7e-185 651.7 628 52.9
SMO164G0214 Selaginella moellendorffii HOM05D006991 ORTHO05D009188 4.8e-184 648.7 632 51.9
Actinidia10005 Actinidia chinensis HOM05D006991 ORTHO05D009188 4.1e-183 645.6 537 60.1
MBI18_g09765_MAGBIO Magnolia biondii HOM05D006991 ORTHO05D009188 1.5e-169 600.5 504 60.3
arahy.Tifrunner.gnm1.ann1.JH251T Arachis hypogaea HOM05D006991 ORTHO05D009188 7.5e-169 598.2 640 49.4
Ca_23659_v3 Cicer arietinum L. HOM05D006991 ORTHO05D009188 3.3e-156 556.2 617 48.6
Phvul.010G096000 Phaseolus vulgaris HOM05D006991 ORTHO05D009188 2.5e-148 530.0 355 69.6
CARHR000550 Cardamine hirsuta HOM05D006991 ORTHO05D009188 6.2e-147 525.4 433 59.6
Manes.01G259800 Manihot esculenta HOM05D006991 ORTHO05D009188 3.6e-139 499.6 334 69.5
TAR375G0043 Trochodendron aralioides HOM05D006991 ORTHO05D009188 8.1e-139 498.4 331 72.5
AagrBONN_evm.TU.Sc2ySwM_344.4948 Anthoceros agrestis HOM05D006991 ORTHO05D009188 2.3e-133 480.3 474 50.0
RcHm_v2.0_Chr1g0354021 Rosa chinensis HOM05D006991 ORTHO05D009188 2.1e-99 367.5 426 48.1
EL10Ac1g02136 Beta vulgaris HOM05D006991 ORTHO05D009188 2.2e-75 287.7 272 53.7
EL10Ac3g06779 Beta vulgaris HOM05D006991 ORTHO05D009188 2.6e-65 254.2 175 64.0
Sabra02G0125100 Salix brachista HOM05D006991 ORTHO05D009188 5.0e-64 250.0 188 63.3
HanXRQChr01g0021681 Helianthus annuus HOM05D006991 ORTHO05D009188 5.7e-60 236.5 204 59.3
EL10Ac5g11247 Beta vulgaris HOM05D006991 ORTHO05D009188 8.5e-48 196.1 192 50.0
Ca_23662_v3 Cicer arietinum L. HOM05D006991 ORTHO05D028457 2.5e-47 194.5 174 56.9
QL09p021383 Quercus lobata HOM05D006991 ORTHO05D009188 8.0e-46 189.5 148 62.8
AUR62033321 Chenopodium quinoa HOM05D006991 ORTHO05D028457 1.8e-45 188.3 164 57.3
AUR62003727 Chenopodium quinoa HOM05D001417 ORTHO05D001496 1.6e-41 175.3 127 65.4
PSO782G3099 Papaver somniferum HOM05D006991 ORTHO05D028457 2.9e-35 154.5 179 48.6
HanXRQChr01g0025441 Helianthus annuus HOM05D006991 ORTHO05D009188 3.6e-30 137.5 72 81.9
CAN.G1527.6 Capsicum annuum HOM05D006991 ORTHO05D028457 3.4e-28 131.0 116 55.2
HanXRQChr03g0092981 Helianthus annuus HOM05D006991 ORTHO05D226355 1.1e-26 125.9 114 54.4
CAN.G226.8 Capsicum annuum HOM05D006991 ORTHO05D000001 4.0e-21 107.5 64 78.1
AUR62036784 Chenopodium quinoa HOM05D006991 ORTHO05D138340 1.2e-20 105.9 78 64.1


User provided reference genes

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