Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE05G1527 Ceratophyllum demersum HOM05D000932 ORTHO05D000729 3.7e-149 531.6 279 100.0
CDE04G2573 Ceratophyllum demersum HOM05D000742 ORTHO05D000729 9.1e-47 191.4 306 45.8
CDE07G0091 Ceratophyllum demersum HOM05D000932 ORTHO05D000729 6.5e-45 185.3 301 44.5
CDE05G1610 Ceratophyllum demersum HOM05D000932 ORTHO05D000729 4.4e-25 119.4 71 85.9
Eucgr.H02954 Eucalyptus grandis HOM05D000932 ORTHO05D000729 7.3e-12 75.5 216 35.6
TPR.G23980 Trifolium pratense HOM05D000932 ORTHO05D000729 2.1e-11 73.9 179 35.2
Potri.008G171500 Populus trichocarpa HOM05D000932 ORTHO05D000729 2.8e-11 73.6 162 38.3
Lj6g0022305 Lotus japonicus HOM05D000932 ORTHO05D000729 8.1e-11 72.0 175 32.0
Eucgr.H00131 Eucalyptus grandis HOM05D000932 ORTHO05D000729 1.8e-10 70.9 262 27.9
MBI07_g12939_MAGBIO Magnolia biondii HOM05D000932 ORTHO05D000729 3.1e-10 70.1 205 32.7
Nn3g19766 Nelumbo nucifera HOM05D000932 ORTHO05D000729 3.1e-10 70.1 275 30.9
EL10Ac3g04948 Beta vulgaris HOM05D000932 ORTHO05D000729 6.8e-10 68.9 251 27.9
Oeu011225.1 Olea europaea HOM05D000932 ORTHO05D000729 1.2e-09 68.2 166 35.5
Duzib212G0703 Durio zibethinus HOM05D000932 ORTHO05D000729 2.0e-09 67.4 252 31.3
Eucgr.H02941 Eucalyptus grandis HOM05D000932 ORTHO05D000729 2.0e-09 67.4 212 33.0
Gohir.A10G109100 Gossypium hirsutum HOM05D000932 ORTHO05D000729 2.0e-09 67.4 274 32.1
Gohir.A10G109116 Gossypium hirsutum HOM05D000932 ORTHO05D000729 2.0e-09 67.4 274 32.1
Nn1g02951 Nelumbo nucifera HOM05D000932 ORTHO05D000729 3.4e-09 66.6 303 28.7
Thecc.04G263300 Theobroma cacao HOM05D000932 ORTHO05D000729 5.8e-09 65.9 260 28.8
Duzib151G0926 Durio zibethinus HOM05D000932 ORTHO05D000729 1.3e-08 64.7 264 29.5
PGSC0003DMG400017148 Solanum tuberosum HOM05D000932 ORTHO05D000729 1.7e-08 64.3 160 33.8
Gohir.D09G058800 Gossypium hirsutum HOM05D000932 ORTHO05D000729 2.9e-08 63.5 199 32.2
Medtr1g044785 Medicago truncatula HOM05D000932 ORTHO05D000729 2.9e-08 63.5 178 33.7
Ca_11908_v3 Cicer arietinum L. HOM05D000932 ORTHO05D000729 3.8e-08 63.2 160 31.2
Gorai.006G073000 Gossypium raimondii HOM05D000932 ORTHO05D000729 3.8e-08 63.2 237 29.5
Gorai.011G178300 Gossypium raimondii HOM05D000932 ORTHO05D000729 3.8e-08 63.2 272 29.4
Haze_11453 Corylus avellana HOM05D000932 ORTHO05D000729 6.4e-08 62.4 172 35.5
Gohir.A09G059500 Gossypium hirsutum HOM05D000932 ORTHO05D000729 6.4e-08 62.4 237 29.5
CiPaw.02G107500 Carya illinoinensis HOM05D000932 ORTHO05D000729 1.1e-07 61.6 163 35.6
ClCG06G007250 Citrullus lanatus HOM05D000932 ORTHO05D000729 1.1e-07 61.6 278 29.5
Lalb_Chr01g0020301 Lupinus albus HOM05D000932 ORTHO05D000729 1.1e-07 61.6 188 31.9
Sed0023179 Sechium edule HOM05D000932 ORTHO05D000729 1.1e-07 61.6 292 28.8
CANSAT78G0790 Cannabis sativa HOM05D000932 ORTHO05D000729 1.4e-07 61.2 168 34.5
Cpa.g.sc44.6 Carica papaya HOM05D000932 ORTHO05D000729 1.4e-07 61.2 166 33.1
Phvul.007G270600 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 1.4e-07 61.2 255 29.8
Ciclev10004980m.g Citrus clementina HOM05D000932 ORTHO05D000729 1.9e-07 60.8 164 34.1
Dinv29807 Davidia involucrata HOM05D000932 ORTHO05D000729 1.9e-07 60.8 211 30.3
Glyma.20G200400 Glycine max HOM05D000932 ORTHO05D000729 1.9e-07 60.8 159 34.6
Sabra10G0041100 Salix brachista HOM05D000932 ORTHO05D000729 1.9e-07 60.8 161 34.2
TPR.G28845 Trifolium pratense HOM05D000932 ORTHO05D000729 1.9e-07 60.8 175 33.1
FAN19G0306 Fragaria x ananassa HOM05D000932 ORTHO05D000729 2.4e-07 60.5 92 37.0
FAN28G0866 Fragaria x ananassa HOM05D000932 ORTHO05D000729 2.4e-07 60.5 92 37.0
Gohir.D10G158700 Gossypium hirsutum HOM05D000932 ORTHO05D000729 2.4e-07 60.5 272 28.7
TWI73G0954 Tripterygium wilfordii HOM05D000932 ORTHO05D000729 2.4e-07 60.5 186 33.3
Actinidia35815 Actinidia chinensis HOM05D002111 ORTHO05D002160 3.2e-07 60.1 87 46.0
DCAR_002299 Daucus carota HOM05D000932 ORTHO05D000729 3.2e-07 60.1 183 31.7
FvH4_1g29660 Fragaria vesca HOM05D000932 ORTHO05D000729 3.2e-07 60.1 92 37.0
FAN23G0457 Fragaria x ananassa HOM05D000932 ORTHO05D000729 3.2e-07 60.1 92 37.0
CAN.G220.76 Capsicum annuum HOM05D000932 ORTHO05D000729 4.1e-07 59.7 211 28.4
CiPaw.01G178700 Carya illinoinensis HOM05D000932 ORTHO05D000729 4.1e-07 59.7 263 31.6
Glyma.10G134400 Glycine max HOM05D000932 ORTHO05D000729 4.1e-07 59.7 261 29.1
CSS0020646 Camellia sinensis var. sinensis HOM05D000932 ORTHO05D000729 5.4e-07 59.3 259 27.0
DCAR_030760 Daucus carota HOM05D000932 ORTHO05D000729 5.4e-07 59.3 238 28.2
Gohir.A02G042600 Gossypium hirsutum HOM05D000932 ORTHO05D000729 5.4e-07 59.3 134 33.6
Lsat_1_v5_gn_6_66601 Lactuca sativa HOM05D000932 ORTHO05D000729 5.4e-07 59.3 289 28.4
HanXRQChr02g0059301 Helianthus annuus HOM05D000932 ORTHO05D000729 7.1e-07 58.9 273 28.6
Psat6g107360 Pisum sativum HOM05D000932 ORTHO05D000729 9.2e-07 58.5 152 34.9
PGR031G3329 Punica granatum HOM05D000932 ORTHO05D000729 9.2e-07 58.5 282 29.4
PGR031G3509 Punica granatum HOM05D000932 ORTHO05D000729 9.2e-07 58.5 282 29.4
MD13G1220700 Malus domestica HOM05D000932 ORTHO05D000729 1.2e-06 58.2 269 26.8
Potri.010G066100 Populus trichocarpa HOM05D000932 ORTHO05D000729 1.2e-06 58.2 264 29.2
Ca_09803_v3 Cicer arietinum L. HOM05D002111 ORTHO05D002160 1.6e-06 57.8 201 32.3
Ca_30484_v3 Cicer arietinum L. HOM05D002111 ORTHO05D002160 1.6e-06 57.8 201 32.3
FAN26G2342 Fragaria x ananassa HOM05D000932 ORTHO05D000729 1.6e-06 57.8 92 37.0
Prupe.1G047400 Prunus persica HOM05D000932 ORTHO05D000729 1.6e-06 57.8 254 29.9
THA.LOC104816005 Tarenaya hassleriana HOM05D000932 ORTHO05D000729 1.6e-06 57.8 140 33.6
VMungo0720G0467 Vigna mungo HOM05D000932 ORTHO05D000729 1.6e-06 57.8 260 27.3
AL4G29000 Arabidopsis lyrata HOM05D000932 ORTHO05D000729 2.1e-06 57.4 163 30.7
Phvul.L001944 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 2.1e-06 57.4 212 29.7
RcHm_v2.0_Chr4g0395281 Rosa chinensis HOM05D000932 ORTHO05D000729 2.1e-06 57.4 251 29.5
Sc19g0003340 Simmondsia chinensis HOM05D000932 ORTHO05D000729 2.1e-06 57.4 222 31.5
MSTRG.9862 Avicennia marina HOM05D000932 ORTHO05D000729 3.5e-06 56.6 293 27.3
ECA248G3283 Erigeron canadensis HOM05D000932 ORTHO05D000729 3.5e-06 56.6 161 28.6
Gohir.D02G048200 Gossypium hirsutum HOM05D000932 ORTHO05D000729 3.5e-06 56.6 181 31.5
SGA_v2.0_scaffold179G39549 Striga asiatica HOM05D000932 ORTHO05D000729 3.5e-06 56.6 148 37.2
HanXRQChr03g0085921 Helianthus annuus HOM05D000932 ORTHO05D000729 4.6e-06 56.2 95 36.8
PSO675G4516 Papaver somniferum HOM05D000932 ORTHO05D000729 4.6e-06 56.2 87 43.7
Lsat_1_v5_gn_2_40740 Lactuca sativa HOM05D000932 ORTHO05D000729 6.0e-06 55.8 162 31.5
Psat2g184400 Pisum sativum HOM05D000932 ORTHO05D000729 6.0e-06 55.8 127 33.9
Thecc.01G292100 Theobroma cacao HOM05D000707 ORTHO05D008008 6.0e-06 55.8 72 45.8
Zm00001eb222170 Zea mays HOM05D000932 ORTHO05D000729 6.0e-06 55.8 94 40.4
Manes.03G159600 Manihot esculenta HOM05D000932 ORTHO05D000729 7.8e-06 55.5 185 30.3


User provided reference genes

Program Settings